For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DITMTMLLWTAPAFVVLSIVEWLDERQDPQYAQKFSARDYAGNWATYALNAVFKFAGQYLLPFSTIVIAS SLTPLRLSPRHWWVWVACLIATDFCYYWAHRADHRVRLLWTAHSVHHSSRFFNLSTNLRLPWFHPVSYTL RSLAWVPVALLGFPVWMIFVLNTAGLLFQIPCHTERIGTLWPAWEFMFNTPSHHRVHHGSNMSYIDKNYG GVFIVWDRLFGTYAAEVEPVRYGLIHDVGSQNPVKFNYLETVAMLRDVAHAKTWRARFGYVFGPPGWSEK AVPAPSLTT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2812 | - | - | 100% (290) | C-5 sterol desaturase |
M. smegmatis MC2 155 | MSMEG_0147 | - | 3e-79 | 50.35% (282) | C-5 sterol desaturase |
M. smegmatis MC2 155 | MSMEG_3666 | - | 5e-61 | 42.55% (282) | C-5 sterol desaturase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1844 | erg3 | 1e-57 | 41.14% (299) | membrane-bound C-5 sterol desaturase erg3 |
M. gilvum PYR-GCK | Mflv_3418 | - | 2e-62 | 40.88% (296) | sterol desaturase-related protein |
M. tuberculosis H37Rv | Rv1814 | erg3 | 1e-57 | 41.14% (299) | membrane-bound C-5 sterol desaturase erg3 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0067 | - | 7e-11 | 28.34% (247) | hypothetical protein MAB_0067 |
M. marinum M | MMAR_3832 | erg3_2 | 3e-80 | 51.09% (276) | membrane-bound C-5 sterol desaturase Erg3_2 |
M. avium 104 | MAV_2902 | - | 8e-57 | 40.74% (297) | C-5 sterol desaturase |
M. thermoresistible (build 8) | TH_2226 | - | 1e-59 | 38.85% (296) | MEMBRANE-BOUND C-5 STEROL DESATURASE ERG3 |
M. ulcerans Agy99 | MUL_3066 | erg3 | 1e-56 | 39.93% (293) | membrane-bound C-5 sterol desaturase Erg3 |
M. vanbaalenii PYR-1 | Mvan_3171 | - | 3e-61 | 40.62% (288) | sterol desaturase-related protein |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2812|M.smegmatis_MC2_155 ------------MDITMTMLLWTAPAFVVLSIVEWLDERQDPQYAQ---- MMAR_3832|M.marinum_M ------------MERAVPIFLTGFMVLVGLDFLSYRLGKQRNRSRP---- Mb1844|M.bovis_AF2122/97 ---------------MRDPVLFAIPCFLLLLILEWTAARKLESIETA--- Rv1814|M.tuberculosis_H37Rv ---------------MRDPVLFAIPCFLLLLILEWTAARKLESIETA--- MAV_2902|M.avium_104 -MSALSGYLTALPPQLRDPVLVAIPFFLLLLTLEWTAARKLEHLT----- MUL_3066|M.ulcerans_Agy99 -MSALPGFLAVLPGEMRDPVLFAIPFFLFLLTVEWAAARKLEKLEAG--- Mflv_3418|M.gilvum_PYR-GCK -----MEFLEFLPPQMREPVLFAIPFFLLLLAIEWTAARKLEHAVEGGAD Mvan_3171|M.vanbaalenii_PYR-1 -----MEFLDFLPPQMREPVLFAIPFFLLLLTIEWTAARKLEHTAP---- TH_2226|M.thermoresistible__bu VDQVVVPFLDVLPAPMRDPVLFAIPFFLLLLALEWTAARRLAHVEAGEGW MAB_0067|M.abscessus_ATCC_1997 -----MAIWFVRYGYVPLMLLGINGVAIALAHRPWAPLWMVVLILVAIGL .* : * : MSMEG_2812|M.smegmatis_MC2_155 ----------KFSARDYAGNWA---TYALNAVFKFAGQYLLPFSTIVIAS MMAR_3832|M.marinum_M ----------SVSARDTAANLS---VYALARLTRSVGS-VTAVPLVLIAS Mb1844|M.bovis_AF2122/97 ATGQPRPASGAYLTRDSVASIS---MGLVSIATTAGWKSLALLGYAAIYA Rv1814|M.tuberculosis_H37Rv ATGQPRPASGAYLTRDSVASIS---MGLVSIATTAGWKSLALLGYAAIYA MAV_2902|M.avium_104 ----ARPAPGAHRTRDSLTSIS---MGLVSVATTAGWKTLALFGYAAIYA MUL_3066|M.ulcerans_Agy99 ATETPRPVSGSYHTRDSVATIS---MGLVSLVTIAFWKTMALLGYAAIYT Mflv_3418|M.gilvum_PYR-GCK EDGT--PAAGAYHTRDSWASLS---MGLVSTVTMSVWKFFALLGYAAIYA Mvan_3171|M.vanbaalenii_PYR-1 DGGS--PAVGAYHTRDSWASVS---MGLVSTVTMSVWKFLALLGYAALYA TH_2226|M.thermoresistible__bu EEGDRRPPPGAFHTPDARASIS---MGLVSIATMGAWKFLALLGYVAIYA MAB_0067|M.abscessus_ATCC_1997 SFLAERVAPYSPEWNESMGDARRDAAHAFVNETALLLTVLVVPAVALLSP : . . : . MSMEG_2812|M.smegmatis_MC2_155 SLTPLRLSPRHWWVWVACLIATDFCYYWAHRADHRVRLLWTAHSVHHSSR MMAR_3832|M.marinum_M ALTPIHLPTAQWWTWACALVLTDLAYYGRHRMTHRIRVFWAAHHVHHSSQ Mb1844|M.bovis_AF2122/97 YLAPWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWATHQAHHSSE Rv1814|M.tuberculosis_H37Rv YLAPWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWATHQAHHSSE MAV_2902|M.avium_104 YLAPWHLPATRWYTWAIPILGVDLLYYAYHRIAHRVRLIWATHQAHHSSE MUL_3066|M.ulcerans_Agy99 YVAPWHLSPGRWYTWVIAIVGVDLLYYTYHRIAHRVRLIWATHQAHHSSE Mflv_3418|M.gilvum_PYR-GCK YLAPWQLSPTQWYTWVIAIVGVDLLFYVYHRTAHRVRLVWATHQAHHSSR Mvan_3171|M.vanbaalenii_PYR-1 YVAPWQLSATQWYTWVIALVGVDLLFYVYHRMAHRVRIVWATHQAHHSSR TH_2226|M.thermoresistible__bu YLAPWHLPADRWYTWVIALVGVDLLFYVYHRMAHRVQVVWATHQAHHSSE MAB_0067|M.abscessus_ATCC_1997 FHTWWPSSIPFVLQVLIAAAVADFGITLMHYASHKVPALWRLHAVHHSIK : . .*: * *:: .* * .*** . MSMEG_2812|M.smegmatis_MC2_155 FFNLSTNLRLPWFHPVSYTLRSLAWVPVALLGFPVWMIFVLNTAGLLFQI MMAR_3832|M.marinum_M YLNLSTGMRTPWLVPGWLFISAVVYVPLALIGFPVWMIFACHAIVLFYQF Mb1844|M.bovis_AF2122/97 YFNFATALRQKWNNSG----EILMWVPLPLMGLPPWMVFCSWSLNLIYQF Rv1814|M.tuberculosis_H37Rv YFNFATALRQKWNNSG----EILMWVPLPLMGLPPWMVFCSWSLNLIYQF MAV_2902|M.avium_104 YYNFATALRQKWNNSG----EILMWIPLPLLGIPPWMVFFSFSLNLIYQF MUL_3066|M.ulcerans_Agy99 YFNFATALRQKWNNSG----EVLMWVPLPLLGLPPWMVFFGFSVSLIYQF Mflv_3418|M.gilvum_PYR-GCK YFNFATALRQKWNNSG----EILMWIPLPLLGVPPWMVFVAFSISLIYQF Mvan_3171|M.vanbaalenii_PYR-1 YFNFATALRQKWNNSG----EILMWIPLPLLGVPPWMVFFAFSVSLIYQF TH_2226|M.thermoresistible__bu YFNLATALRQKWNNSG----EVLLWIPLPLLGVPPWLVFFSFSISLIYQF MAB_0067|M.abscessus_ATCC_1997 RFYGFNGLMKHPVHGG--LELMAGTAPLLIMGLP-QAVAEALTVLIAVQL . : *: ::*.* : : : *: MSMEG_2812|M.smegmatis_MC2_155 PCHTERIGTLWPAWEFMFNTPSHHRVHHGSNMSYIDKNYGGVFIVWDRLF MMAR_3832|M.marinum_M PIHTERINRLPRPIEYLFNTPSHHRVHHGANNPYLNKNYGGILIVWDRLF Mb1844|M.bovis_AF2122/97 WVHTERIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLF Rv1814|M.tuberculosis_H37Rv WVHTERIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLF MAV_2902|M.avium_104 WIHTERIDKLPRPFEFVFNTPSHHRVHHGMDKVYLDKNYGGILIVWDRLF MUL_3066|M.ulcerans_Agy99 WVHTERINKLPRWFEFIFNTPSHHRVHHGMDQMYLDKNYGGILIIWDRLF Mflv_3418|M.gilvum_PYR-GCK WIHTEHIGKLWRPFEFVFNTPSHHRVHHGMDPLYLDKNYGGILIIWDRLF Mvan_3171|M.vanbaalenii_PYR-1 WIHTERIGKLWLPVEFIFNTPSHHRVHHGMDKLYLDKNYGGILIIWDRLF TH_2226|M.thermoresistible__bu WIHTERIGKLPAPIEFVFNTPSHHRVHHGMDPEYLDKNYGGILIIWDRLF MAB_0067|M.abscessus_ATCC_1997 LLQHSNADYRIGRLRVVLALNEGHRFHHLKWAGIGDVNFGLFTLVWDHLL : .. . . :: . **.** : *:* . ::**:*: MSMEG_2812|M.smegmatis_MC2_155 GTYAAEVEPVRYGLIHDVGSQNPVKFNYLETVAMLRDVAHAKTWRARFGY MMAR_3832|M.marinum_M GSYAEEDEPVRYGLQQNIATHNPIKLNYHEFVAMLSDVGRAKTWRGRVGY Mb1844|M.bovis_AF2122/97 GSFQPELFRPHYGLTKRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGY Rv1814|M.tuberculosis_H37Rv GSFQPELFRPHYGLTKRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGY MAV_2902|M.avium_104 GTFQAELFRPHYGLTKQVDTFNVWKLQTREYVAIARDWRSASRLRDRLGY MUL_3066|M.ulcerans_Agy99 RSFQAETARPHYGLTKPVDTFNIWKLQTREYVAIARDWRSATRLRDRLGY Mflv_3418|M.gilvum_PYR-GCK GTFQPEVFRPHYGLTKPVDTFNIWKLQTHEYAAIWRDARAARGVRAKLGY Mvan_3171|M.vanbaalenii_PYR-1 GTFQPEVFRPHYGLTKPVDTFNIWKLQTHEYVAIGRDVRAARGLRAKLGY TH_2226|M.thermoresistible__bu GTFCEEKFRPRYGLTKPVDTYNIWRLQTHEYLAIARDVAKARNWRERLGY MAB_0067|M.abscessus_ATCC_1997 RTFSFDPARRFHSDDLGMAAKPNYPAGYTAQLAEPFRTSGACHFDG-LQS :: : :. : : * * . MSMEG_2812|M.smegmatis_MC2_155 VFGPPGWSEKAV-PAPSLTT------------------- MMAR_3832|M.marinum_M LLRPPGWSEVAETPAPRSHDSDDHAVPVDGQHWAAAGNG Mb1844|M.bovis_AF2122/97 VFGPPGWEPRTID--KSNAAASLVTSR------------ Rv1814|M.tuberculosis_H37Rv VFGPPGWEPRTID--KSNAAASLVTSR------------ MAV_2902|M.avium_104 VFGPPGWAPRSAG--RTAAGAPVVTSL------------ MUL_3066|M.ulcerans_Agy99 AFGPPGWQPSTTATPRAEDAATVTTSGWRPT-------- Mflv_3418|M.gilvum_PYR-GCK IFGPPGWQP---AQVQTPAPVAP---------------- Mvan_3171|M.vanbaalenii_PYR-1 IFGPPGWEPSTAPGARAAAHATP---------------- TH_2226|M.thermoresistible__bu IFGPPGWQPAP-AGAPTPAPARD---------------- MAB_0067|M.abscessus_ATCC_1997 EVTATGRQPST---------------------------- . ..*