For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
EQLAEQVKMVFVYGLPAFLLLIAVEYYSYFRERRENTAPSEPKRGVSSRDTAANISTYLIRLVVSPLEKF IELPIIVIAAAFAPLALPADQWWTWALALFLADATYYVKHRMGHRIRLFWAEHSVHHSSQYFNLSTSLRL PWLVPGSFLKSVVSIPMALIGIPVWMIFLCQAIVLVYQFPIHTERVGRLPRPIEFIFNTPSHHRVHHGSN NPYLDKNYGGILIIFDRMFGSYAEELEPVRYGLTKNIDTNNPIKVNYHEFVLMLRDVWHAETWRGRIGYL LRPPGWQETKTDTAQPELVHTAS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0147 | - | - | 100% (304) | C-5 sterol desaturase |
M. smegmatis MC2 155 | MSMEG_2812 | - | 3e-79 | 50.35% (282) | C-5 sterol desaturase |
M. smegmatis MC2 155 | MSMEG_3666 | - | 2e-73 | 45.12% (297) | C-5 sterol desaturase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1844 | erg3 | 1e-67 | 44.76% (286) | membrane-bound C-5 sterol desaturase erg3 |
M. gilvum PYR-GCK | Mflv_3418 | - | 5e-69 | 44.22% (303) | sterol desaturase-related protein |
M. tuberculosis H37Rv | Rv1814 | erg3 | 1e-67 | 44.76% (286) | membrane-bound C-5 sterol desaturase erg3 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0067 | - | 2e-07 | 22.65% (234) | hypothetical protein MAB_0067 |
M. marinum M | MMAR_3832 | erg3_2 | 1e-106 | 63.41% (276) | membrane-bound C-5 sterol desaturase Erg3_2 |
M. avium 104 | MAV_2902 | - | 8e-68 | 44.76% (286) | C-5 sterol desaturase |
M. thermoresistible (build 8) | TH_2226 | - | 8e-75 | 46.76% (293) | MEMBRANE-BOUND C-5 STEROL DESATURASE ERG3 |
M. ulcerans Agy99 | MUL_3066 | erg3 | 5e-67 | 44.33% (291) | membrane-bound C-5 sterol desaturase Erg3 |
M. vanbaalenii PYR-1 | Mvan_3171 | - | 3e-71 | 45.12% (297) | sterol desaturase-related protein |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0147|M.smegmatis_MC2_155 --------MEQLAEQVKMVFVYGLPAFLLLIAVEYYSY-FRERRENT--- MMAR_3832|M.marinum_M ------------MERAVPIFLTG---FMVLVGLDFLSYRLGKQRNRS--- Mb1844|M.bovis_AF2122/97 ---------------MRDPVLFAIPCFLLLLILEWTAARKLESIETA--- Rv1814|M.tuberculosis_H37Rv ---------------MRDPVLFAIPCFLLLLILEWTAARKLESIETA--- MAV_2902|M.avium_104 -MSALSGYLTALPPQLRDPVLVAIPFFLLLLTLEWTAARKLEHLT----- MUL_3066|M.ulcerans_Agy99 -MSALPGFLAVLPGEMRDPVLFAIPFFLFLLTVEWAAARKLEKLEAG--- Mflv_3418|M.gilvum_PYR-GCK -----MEFLEFLPPQMREPVLFAIPFFLLLLAIEWTAARKLEHAVEGGAD Mvan_3171|M.vanbaalenii_PYR-1 -----MEFLDFLPPQMREPVLFAIPFFLLLLTIEWTAARKLEHTAP---- TH_2226|M.thermoresistible__bu VDQVVVPFLDVLPAPMRDPVLFAIPFFLLLLALEWTAARRLAHVEAGEGW MAB_0067|M.abscessus_ATCC_1997 -MAIWFVRYGYVPLMLLGINGVAIALAHRPWAPLWMVVLILVAIGLSFLA . : MSMEG_0147|M.smegmatis_MC2_155 ---APSEPKRGVSSRDTAANISTYLIRLVVSPLEKFIELP-IIVIAAAFA MMAR_3832|M.marinum_M ---RPS-----VSARDTAANLSVYALARLTRSVGSVTAVP-LVLIASALT Mb1844|M.bovis_AF2122/97 ATGQPRPASGAYLTRDSVASISMGLVSIATTAGWKSLALLGYAAIYAYLA Rv1814|M.tuberculosis_H37Rv ATGQPRPASGAYLTRDSVASISMGLVSIATTAGWKSLALLGYAAIYAYLA MAV_2902|M.avium_104 ----ARPAPGAHRTRDSLTSISMGLVSVATTAGWKTLALFGYAAIYAYLA MUL_3066|M.ulcerans_Agy99 ATETPRPVSGSYHTRDSVATISMGLVSLVTIAFWKTMALLGYAAIYTYVA Mflv_3418|M.gilvum_PYR-GCK EDGT--PAAGAYHTRDSWASLSMGLVSTVTMSVWKFFALLGYAAIYAYLA Mvan_3171|M.vanbaalenii_PYR-1 DGGS--PAVGAYHTRDSWASVSMGLVSTVTMSVWKFLALLGYAALYAYVA TH_2226|M.thermoresistible__bu EEGDRRPPPGAFHTPDARASISMGLVSIATMGAWKFLALLGYVAIYAYLA MAB_0067|M.abscessus_ATCC_1997 ERVAPYSPEWNESMGDARRDAAHAFVN-ETALLLTVLVVPAVALLSPFHT *: : : . . : : . : MSMEG_0147|M.smegmatis_MC2_155 PLALPADQWWTWALALFLADATYYVKHRMGHRIRLFWAEHSVHHSSQYFN MMAR_3832|M.marinum_M PIHLPTAQWWTWACALVLTDLAYYGRHRMTHRIRVFWAAHHVHHSSQYLN Mb1844|M.bovis_AF2122/97 PWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWATHQAHHSSEYFN Rv1814|M.tuberculosis_H37Rv PWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWATHQAHHSSEYFN MAV_2902|M.avium_104 PWHLPATRWYTWAIPILGVDLLYYAYHRIAHRVRLIWATHQAHHSSEYYN MUL_3066|M.ulcerans_Agy99 PWHLSPGRWYTWVIAIVGVDLLYYTYHRIAHRVRLIWATHQAHHSSEYFN Mflv_3418|M.gilvum_PYR-GCK PWQLSPTQWYTWVIAIVGVDLLFYVYHRTAHRVRLVWATHQAHHSSRYFN Mvan_3171|M.vanbaalenii_PYR-1 PWQLSATQWYTWVIALVGVDLLFYVYHRMAHRVRIVWATHQAHHSSRYFN TH_2226|M.thermoresistible__bu PWHLPADRWYTWVIALVGVDLLFYVYHRMAHRVQVVWATHQAHHSSEYFN MAB_0067|M.abscessus_ATCC_1997 WWPSSIPFVLQVLIAAAVADFGITLMHYASHKVPALWRLHAVHHSIKRFY . . .* * *:: .* * .*** . MSMEG_0147|M.smegmatis_MC2_155 LSTSLRLPWLVPG-SFLKSVVSIPMALIGIPVWMIFLCQAIVLVYQFPIH MMAR_3832|M.marinum_M LSTGMRTPWLVPGWLFISAVVYVPLALIGFPVWMIFACHAIVLFYQFPIH Mb1844|M.bovis_AF2122/97 FATALRQKWNNSG----EILMWVPLPLMGLPPWMVFCSWSLNLIYQFWVH Rv1814|M.tuberculosis_H37Rv FATALRQKWNNSG----EILMWVPLPLMGLPPWMVFCSWSLNLIYQFWVH MAV_2902|M.avium_104 FATALRQKWNNSG----EILMWIPLPLLGIPPWMVFFSFSLNLIYQFWIH MUL_3066|M.ulcerans_Agy99 FATALRQKWNNSG----EVLMWVPLPLLGLPPWMVFFGFSVSLIYQFWVH Mflv_3418|M.gilvum_PYR-GCK FATALRQKWNNSG----EILMWIPLPLLGVPPWMVFVAFSISLIYQFWIH Mvan_3171|M.vanbaalenii_PYR-1 FATALRQKWNNSG----EILMWIPLPLLGVPPWMVFFAFSVSLIYQFWIH TH_2226|M.thermoresistible__bu LATALRQKWNNSG----EVLLWIPLPLLGVPPWLVFFSFSISLIYQFWIH MAB_0067|M.abscessus_ATCC_1997 GFNGLMKHPVHGG--LELMAGTAPLLIMGLP-QAVAEALTVLIAVQLLLQ ..: * *: ::*.* : :: : *: :: MSMEG_0147|M.smegmatis_MC2_155 TERVGRLPRPIEFIFNTPSHHRVHHGSNNPYLDKNYGGILIIFDRMFGSY MMAR_3832|M.marinum_M TERINRLPRPIEYLFNTPSHHRVHHGANNPYLNKNYGGILIVWDRLFGSY Mb1844|M.bovis_AF2122/97 TERIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLFGSF Rv1814|M.tuberculosis_H37Rv TERIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLFGSF MAV_2902|M.avium_104 TERIDKLPRPFEFVFNTPSHHRVHHGMDKVYLDKNYGGILIVWDRLFGTF MUL_3066|M.ulcerans_Agy99 TERINKLPRWFEFIFNTPSHHRVHHGMDQMYLDKNYGGILIIWDRLFRSF Mflv_3418|M.gilvum_PYR-GCK TEHIGKLWRPFEFVFNTPSHHRVHHGMDPLYLDKNYGGILIIWDRLFGTF Mvan_3171|M.vanbaalenii_PYR-1 TERIGKLWLPVEFIFNTPSHHRVHHGMDKLYLDKNYGGILIIWDRLFGTF TH_2226|M.thermoresistible__bu TERIGKLPAPIEFVFNTPSHHRVHHGMDPEYLDKNYGGILIIWDRLFGTF MAB_0067|M.abscessus_ATCC_1997 HSNADYRIGRLRVVLALNEGHRFHHLKWAGIGDVNFGLFTLVWDHLLRTF .. . .. :: . **.** : *:* : :::*::: :: MSMEG_0147|M.smegmatis_MC2_155 AEELEPVRYGLTKNIDTNNPIKVNYHEFVLMLRDVWHAETWRGRIGYLLR MMAR_3832|M.marinum_M AEEDEPVRYGLQQNIATHNPIKLNYHEFVAMLSDVGRAKTWRGRVGYLLR Mb1844|M.bovis_AF2122/97 QPELFRPHYGLTKRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGYVFG Rv1814|M.tuberculosis_H37Rv QPELFRPHYGLTKRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGYVFG MAV_2902|M.avium_104 QAELFRPHYGLTKQVDTFNVWKLQTREYVAIARDWRSASRLRDRLGYVFG MUL_3066|M.ulcerans_Agy99 QAETARPHYGLTKPVDTFNIWKLQTREYVAIARDWRSATRLRDRLGYAFG Mflv_3418|M.gilvum_PYR-GCK QPEVFRPHYGLTKPVDTFNIWKLQTHEYAAIWRDARAARGVRAKLGYIFG Mvan_3171|M.vanbaalenii_PYR-1 QPEVFRPHYGLTKPVDTFNIWKLQTHEYVAIGRDVRAARGLRAKLGYIFG TH_2226|M.thermoresistible__bu CEEKFRPRYGLTKPVDTYNIWRLQTHEYLAIARDVAKARNWRERLGYIFG MAB_0067|M.abscessus_ATCC_1997 SFDPARRFHSDDLGMAAKPNYPAGYTAQLAEPFRTSGACHFDG-LQSEVT : :. : : * : . MSMEG_0147|M.smegmatis_MC2_155 PPGWQETKTDTAQP-----------ELVHTAS---- MMAR_3832|M.marinum_M PPGWSEVAETPAPRSHDSDDHAVPVDGQHWAAAGNG Mb1844|M.bovis_AF2122/97 PPGWEPRTID--KSNAAASLVTSR------------ Rv1814|M.tuberculosis_H37Rv PPGWEPRTID--KSNAAASLVTSR------------ MAV_2902|M.avium_104 PPGWAPRSAG--RTAAGAPVVTSL------------ MUL_3066|M.ulcerans_Agy99 PPGWQPSTTATPRAEDAATVTTSGWRPT-------- Mflv_3418|M.gilvum_PYR-GCK PPGWQP---AQVQTPAPVAP---------------- Mvan_3171|M.vanbaalenii_PYR-1 PPGWEPSTAPGARAAAHATP---------------- TH_2226|M.thermoresistible__bu PPGWQPAP-AGAPTPAPARD---------------- MAB_0067|M.abscessus_ATCC_1997 ATGRQPST---------------------------- ..*