For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSVTTEIDAVIRQLRKQVCDLHAELTRYQLVIWTAGNVSARVPDRDLMIIKPSGVDYDSMTPEQMVVCDL HGELVDGDLAPSSDTAAHAYVYRHMPEVGGVVHTHSTYATAWAARGEAIPCVLTMIADEFGGDIPVGPFA LIGDDSIGRGIVETLQHSNSRAVLMRNHGPFTVGRDARDAVKAAVMVEDVARTVHISRQLGTPDVIPPAD VRRLFDRYQNVYGQPQASQEG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1714 | - | - | 100% (231) | L-ribulose-5-phosphate 4-epimerase |
| M. smegmatis MC2 155 | MSMEG_6863 | - | 2e-06 | 25.44% (169) | hypothetical protein MSMEG_6863 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0748c | fucA | 5e-23 | 34.62% (208) | L-fuculose-phosphate aldolase |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv0727c | fucA | 5e-23 | 34.62% (208) | L-fuculose-phosphate aldolase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2912c | - | 2e-09 | 25.99% (177) | aldolase |
| M. marinum M | MMAR_1064 | fucA | 2e-23 | 35.57% (194) | L-fuculose-1-phosphate aldolase FucA |
| M. avium 104 | MAV_4439 | - | 1e-21 | 32.39% (213) | L-fuculose-phosphate aldolase |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0822 | fucA | 1e-23 | 35.57% (194) | L-fuculose-phosphate aldolase |
| M. vanbaalenii PYR-1 | Mvan_0451 | - | 3e-10 | 23.66% (186) | hypothetical protein Mvan_0451 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1064|M.marinum_M ---------------------------------MKFVDNAQVAVLAAAKD
MUL_0822|M.ulcerans_Agy99 ---------------------------------MKFVDNAQVAVLAAAKD
MAV_4439|M.avium_104 ---------------------------------MKFVDDPEQAVLDAAKD
Mb0748c|M.bovis_AF2122/97 ---------------------------------MNFVDDPESAVLAAAKD
Rv0727c|M.tuberculosis_H37Rv ---------------------------------MNFVDAPESAVLAAAKD
MSMEG_1714|M.smegmatis_MC2_155 ---------------MSVTTE-----------IDAVIRQLRKQVCDLHAE
MAB_2912c|M.abscessus_ATCC_199 MTSGNVVAGEELSAYMVGSADGVQLGPAAAETVTQERERRLRELAAAFRI
Mvan_0451|M.vanbaalenii_PYR-1 MTS---TMHDSKSDLMRRALDGLSR------NVTESSLTLREKLAVTCRA
:
MMAR_1064|M.marinum_M MLRRGLVEGTAGNISARCADGN-LVIT-PSSVDYADMTLDDLVQVDADGT
MUL_0822|M.ulcerans_Agy99 MLRRGLVEGTAGNISARCADGN-LVIT-PSSVDYADMTLDDLVQVDADGT
MAV_4439|M.avium_104 MLRRGLVEGTAGNISARRSDGN-IVIT-PSSVDYRDMQLDDLVLIDPAGS
Mb0748c|M.bovis_AF2122/97 MLRRGLVEGTAGNISARRSDGN-VVIT-PSSVDYAEMLLHDLVLVDAGGA
Rv0727c|M.tuberculosis_H37Rv MLRRGLVEGTAGNISARRSDGN-VVIT-PSSVDYAEMLLHDLVLVDAGGA
MSMEG_1714|M.smegmatis_MC2_155 LTRYQLVIWTAGNVSARVPDRD-LMIIKPSGVDYDSMTPEQMVVCDLHGE
MAB_2912c|M.abscessus_ATCC_199 FGTFGFSEGVAGHITVRDPEFPDTFWVNPFGMNFRHITVSDLIQVDHDGN
Mvan_0451|M.vanbaalenii_PYR-1 LFDAGHDSGLAGQITAR-AEAPGTYYTQRLGLGFDEITAGNLLLVDEDLK
: **:::.* .: .:.: : ::: *
MMAR_1064|M.marinum_M VLHAKAGRAPSTEMHLHLACYQAFDDIGSVIHSHPVWATMFAIAHQPIPA
MUL_0822|M.ulcerans_Agy99 VLHAKAGRAPSTEMHLHLACYQAFDDIGSVIHSHPVWATMFAIAHQPIPA
MAV_4439|M.avium_104 VLQAAQGRSPSTEMQLHLACFAAFDDIGCVIHSHPVWATMFAIAHQSIPA
Mb0748c|M.bovis_AF2122/97 VLHAKDGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHEPIPA
Rv0727c|M.tuberculosis_H37Rv VLHAKDGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHEPIPA
MSMEG_1714|M.smegmatis_MC2_155 LVDG--DLAPSSDTAAHAYVYRHMPEVGGVVHTHSTYATAWAARGEAIPC
MAB_2912c|M.abscessus_ATCC_199 VITG-SRPVNRAAFCIHSEVHKARPDVIAAAHAHSVHGKAFSSLGQPLLP
Mvan_0451|M.vanbaalenii_PYR-1 VLDG-EGMAN-PANRFHSWIYRARPDVNCIVHTHPFHVAALSMLEVPLVV
:: . . * . :: *:*. : .:
MMAR_1064|M.marinum_M CIDEFAVYCGGDVRCAEY-AASGTPEVGRNAVAALQGRA--AALIANHGL
MUL_0822|M.ulcerans_Agy99 CIDEFAVYCGGDVRCAEY-AASGTPEVGRNAVAALQGRA--AALIANHGL
MAV_4439|M.avium_104 CIDEFAVYCGGDVRCAEY-AASGSPDVGANAVKALQGRG--AALIANHGL
Mb0748c|M.bovis_AF2122/97 CIDEFAIYCGGDVRCTEY-AASGTPEVGRNAVRALEGRA--AALIANHGL
Rv0727c|M.tuberculosis_H37Rv CIDEFAIYCGGDVRCTEY-AASGTPEVGRNAVRALEGRA--AALIANHGL
MSMEG_1714|M.smegmatis_MC2_155 VLTMIADEFGGDIPVGPF-ALIGDDSIGRGIVETLQHSNSRAVLMRNHGP
MAB_2912c|M.abscessus_ATCC_199 ITQDACAFYQDHAVYTDYRGVVGDLEEGRAIGSALGPAK--AVILQNHGL
Mvan_0451|M.vanbaalenii_PYR-1 SQMDIAPLYGDCAFLPDWPGVPVGNEEGEIISAALGDKK--AILLAHHGH
. . : . . * :* * :: :**
MMAR_1064|M.marinum_M VAVGPRPDKVLHVTALVERTAQIVWGARALGGPVPIPEDVNRNFAG----
MUL_0822|M.ulcerans_Agy99 VAVGPRPDKVLHVTALVERTAQIVWGARALGGPVPIPEDVNRNFAG----
MAV_4439|M.avium_104 VAVGPRPDKVLHITALVERTAQIVWGARALGGPVPIPEDVNRNFAA----
Mb0748c|M.bovis_AF2122/97 VAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPEDVCRNFTG----
Rv0727c|M.tuberculosis_H37Rv VAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPEDVCRNFTG----
MSMEG_1714|M.smegmatis_MC2_155 FTVGRDARDAVKAAVMVEDVARTVHISRQLGTPDVIPPADVRRLFD----
MAB_2912c|M.abscessus_ATCC_199 LTVGHSVAEAAWWFITMERSCQAQLLAMAAGEPRTIDHDTAVSVYNQIGT
Mvan_0451|M.vanbaalenii_PYR-1 VVAGASVEEACSLAMLVERGAKLQLAAMAAGTIAPLPDRLAREAHDWTLT
...* .. :* .: : * :
MMAR_1064|M.marinum_M ------VYAYLRANPM---------
MUL_0822|M.ulcerans_Agy99 ------VYAYLRANPM---------
MAV_4439|M.avium_104 ------VYGYLRANP----------
Mb0748c|M.bovis_AF2122/97 ------VYGYLRANPL---------
Rv0727c|M.tuberculosis_H37Rv ------VYGYLRANPL---------
MSMEG_1714|M.smegmatis_MC2_155 ------RYQNVYGQPQASQEG----
MAB_2912c|M.abscessus_ATCC_199 PVAGWFQFQPLWDDVIRTAPEALH-
Mvan_0451|M.vanbaalenii_PYR-1 PKRSQANFAYYARRALANHPDALDR
: