For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAKNASSEADSSIIVDLSEAAMHMYSAAIDALPFPEDKKFHKRADIVLSGLRKLRSALTEAASAQRPSPA VAAALSGVRQRYDSLMAHAAAAPGSSLGQQIYVTRVAAKLSAEEVANGAGLRPGLLDELEAGATPTDDEA ARIRETIAALGGLPGADHGEHEGRHAGGDDSAEGASVIDFAQHDSQHEGGDGELTENAG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1634 | - | - | 100% (199) | forkhead-associated protein |
M. smegmatis MC2 155 | MSMEG_6518 | - | 7e-34 | 55.81% (129) | hypothetical protein MSMEG_6518 |
M. smegmatis MC2 155 | MSMEG_0052 | - | 2e-14 | 34.65% (127) | hypothetical protein MSMEG_0052 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3893 | - | 1e-17 | 36.11% (144) | hypothetical protein Mb3893 |
M. gilvum PYR-GCK | Mflv_0777 | - | 1e-18 | 34.23% (149) | hypothetical protein Mflv_0777 |
M. tuberculosis H37Rv | Rv3863 | - | 1e-17 | 36.11% (144) | hypothetical protein Rv3863 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1298c | - | 2e-38 | 52.41% (145) | hypothetical protein MAB_1298c |
M. marinum M | MMAR_5438 | - | 1e-17 | 38.10% (126) | putative regulatory protein |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_1779 | - | 5e-36 | 52.21% (136) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0068 | - | 3e-17 | 33.56% (146) | hypothetical protein Mvan_0068 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_1634|M.smegmatis_MC2_155 -------------------------------------------------- TH_1779|M.thermoresistible__bu -------------------------------------------------- MAB_1298c|M.abscessus_ATCC_199 -------------------------------------------------- Mb3893|M.bovis_AF2122/97 --MAGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEP Rv3863|M.tuberculosis_H37Rv --MAGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEP MMAR_5438|M.marinum_M MLVSGTRALPPAS--VAASEESTYMPDAESTARPALRVARGGDSPGLVTP Mflv_0777|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0068|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1634|M.smegmatis_MC2_155 -------------------------------------------------- TH_1779|M.thermoresistible__bu -------------------------------------------------- MAB_1298c|M.abscessus_ATCC_199 -------------------------------------------------- Mb3893|M.bovis_AF2122/97 RRGVAIIGHSCRVGTQIDDSRISQTHLRAVSDDGRWRIVGNIPRGMFVGG Rv3863|M.tuberculosis_H37Rv RRGVAIIGHSCRVGTQIDDSRISQTHLRAVSDDGRWRIVGNIPRGMFVGG MMAR_5438|M.marinum_M --GHRPVGRGALTNARLDDPVLSQTHVRAVSDGGQRRIVTNSPNGMFVDG Mflv_0777|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0068|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1634|M.smegmatis_MC2_155 -------------------------------------------------- TH_1779|M.thermoresistible__bu -------------------------------------------------- MAB_1298c|M.abscessus_ATCC_199 -------------------------------------------------- Mb3893|M.bovis_AF2122/97 RRGSSVTVSDKTLIRFGDPPGGKALTFEVVRPSDSAAQHGRVQPSADLSD Rv3863|M.tuberculosis_H37Rv RRGSSVTVSDKTLIRFGDPPGGKALTFEVVRPSDSAAQHGRVQPSADLSD MMAR_5438|M.marinum_M TRKSSVAVSDKTIVRFGDPTGGKALTFEVVRPSNSPEEDSREQRPAEQSD Mflv_0777|M.gilvum_PYR-GCK ------------------------------------------MTNAEPID Mvan_0068|M.vanbaalenii_PYR-1 ------------------------------------------MTNAEPVD MSMEG_1634|M.smegmatis_MC2_155 -------------------------------------------------- TH_1779|M.thermoresistible__bu -------------------------------------------------- MAB_1298c|M.abscessus_ATCC_199 -------------------------------------------------- Mb3893|M.bovis_AF2122/97 DPAHNAAPVAPDPGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAF Rv3863|M.tuberculosis_H37Rv DPAHNAAPVAPDPGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAF MMAR_5438|M.marinum_M SQTN-----EADPGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAF Mflv_0777|M.gilvum_PYR-GCK ESIG-----APDPGMARAGAAAAARRRELNISQRSLAAGGIINAGALIAF Mvan_0068|M.vanbaalenii_PYR-1 QSTG-----APDPGMVRAGAAAAARRRELDISQRSLAAEGIINAGALIAF MSMEG_1634|M.smegmatis_MC2_155 -------------------------------------------MAKNASS TH_1779|M.thermoresistible__bu -------------------------------------------------- MAB_1298c|M.abscessus_ATCC_199 -------------------------------------------MPEVVPD Mb3893|M.bovis_AF2122/97 EKGRSWPRERTRAKLEEVLQWPAGTIARIRRGEPTEPATNPDASPGLRPA Rv3863|M.tuberculosis_H37Rv EKGRSWPRERTRAKLEEVLQWPAGTIARIRRGEPTEPATNPDASPGLRPA MMAR_5438|M.marinum_M EKGRSWPRERTRAKLEEVLQWPAGTIARIRQGESVAPEPAPEASVEAPTS Mflv_0777|M.gilvum_PYR-GCK EKGRSWPRERTRARLEEILQWPPGTIAALRRGEPVHPAPTP-EARPPASG Mvan_0068|M.vanbaalenii_PYR-1 EKGRSWPRERTRARLEEILQWPPGTIARLRRGEPLRAAPPPPESRAPASN MSMEG_1634|M.smegmatis_MC2_155 EADSSIIVDLSEAAMHMYSAAIDALPFPEDKKFHKRADIVLSGLRKLRSA TH_1779|M.thermoresistible__bu ---------MADAAMHMYAAAIDALPDPADPEYPEQVGVVLAGLRKLQGA MAB_1298c|M.abscessus_ATCC_199 DGEAPVIVSLVDAAVHMYSSAIDTLPDPSDPEYGERVAVVLSGLRKLESA Mb3893|M.bovis_AF2122/97 DGPASLIAQAVTAAVDGCSLAIAALPATEDPEFTERAAPILADLRQLEAI Rv3863|M.tuberculosis_H37Rv DGPASLIAQAVTAAVDGCSLAIAALPATEDPEFTERAAPILADLRQLEAI MMAR_5438|M.marinum_M DGPASLIAQAVAAAVDTCSLAIAALPAPEEPDFTERAAPILADLRQLEGI Mflv_0777|M.gilvum_PYR-GCK D-EVSLIAQAVITAVHAFGSTISSLPPADDAAFIPRVTAILADLRQLEAV Mvan_0068|M.vanbaalenii_PYR-1 D-EVSLIAQAVTTAVSAFGSTVAALPPVDDAAFVPRVTAILADLRQLDAV :*: . :: :** : : :. :*:.**:* . MSMEG_1634|M.smegmatis_MC2_155 LTEAASAQRPSPAVAAALSGVRQRYDSLMAHAAAAPGSSLGQQIYVTRVA TH_1779|M.thermoresistible__bu LAQAATRSRTNPSVIVALSAVRNRYDEVMAAAANGPNATLGQRLYIARQR MAB_1298c|M.abscessus_ATCC_199 ISKAAGRSRVTPSVIVALSGVRHRYDDLMKAAANSPSATLGQRLYTARRR Mb3893|M.bovis_AF2122/97 AVQATRISRITPELIKALGAVRRHHDELMRLGATAPGATLAQRLYAARRR Rv3863|M.tuberculosis_H37Rv AVQATRISRITPELIKALGAVRRHHDELMRLGATAPGATLAQRLYAARRR MMAR_5438|M.marinum_M AVQATRISRITPELIKALGAVRRYHDKLMTLSATAPGATLAQRLYAARRR Mflv_0777|M.gilvum_PYR-GCK AARAARIGRVTPALIKALSTVRGLYDDLMLRAAGAPQAGLGHRLYAARRG Mvan_0068|M.vanbaalenii_PYR-1 ASRAARIGRVTPALIKALSAVRGLYDDLMVRAARAPHATLGQRLYAARRG .*: * .* : **. ** :*.:* .* .* : *.:::* :* MSMEG_1634|M.smegmatis_MC2_155 AKLSAEEVANGAGLRPGLLDELEAGATPTDDEAARIRETIAALGGLPGAD TH_1779|M.thermoresistible__bu AKLSIPEAANGIGLRPDIIAAVEAEEIPTEGEEIKIKDLIAALGG----- MAB_1298c|M.abscessus_ATCC_199 ARLTAQETANGAGLKVGFLTAIESEEPVTEDEAAKIKDLIAALGG----- Mb3893|M.bovis_AF2122/97 ANLSTLETAQAAGVAEEMIVGAEAEEELPAEATEAIEALIRQIN------ Rv3863|M.tuberculosis_H37Rv ANLSTLETAQAAGVAEEMIVGAEAEEELPAEATEAIEALIRQIN------ MMAR_5438|M.marinum_M ANLSTSETAQAAGVTEELIVRAEAEEALHAEAAEAIEALIRQIN------ Mflv_0777|M.gilvum_PYR-GCK ANLTVLETAQAAGVSERAIEQAEAGEPVTASEADAIETLVGQIA------ Mvan_0068|M.vanbaalenii_PYR-1 ANLTVLETAQAAGVSEDAVQQAEADEPLSPADIAAIETLISQIG------ *.*: *.*:. *: : *: *. : : MSMEG_1634|M.smegmatis_MC2_155 HGEHEGRHAGGDDSAEGASVIDFAQHDSQHEGGDGELTENAG TH_1779|M.thermoresistible__bu ------------------------------------------ MAB_1298c|M.abscessus_ATCC_199 ------------------------------------------ Mb3893|M.bovis_AF2122/97 ------------------------------------------ Rv3863|M.tuberculosis_H37Rv ------------------------------------------ MMAR_5438|M.marinum_M ------------------------------------------ Mflv_0777|M.gilvum_PYR-GCK ------------------------------------------ Mvan_0068|M.vanbaalenii_PYR-1 ------------------------------------------