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M. smegmatis MC2 155 MSMEG_1232 (-)

annotation: ABC transporter substrate-binding protein
coordinates: 1302007 - 1303464
length: 485

MDEAQQDSGGRWRARSAALLAAVTVGGAQLLTGCGLLTEPTVVVNVGYQSKTINTVNAGTLLRDRGDFEA
ELKQIGAETGTKYRVVWQDFASGAPLTAQMIATHVDIGSMGDYPLLTNGSKTRKYDDAATEMVAITGYNL
RGSLNQVVVPSDSSAQKLEDLTGKKVSTSLGSAGDGMFSSALKGNGIDKNAVQIVNQDPSVGASAIDGRQ
VDALAQFVPWPQLVIYRNQGRLLYDGGDNNVPTFHGVVVRRQFADQRPEVMAAFLRAMRSTTDAIVADPL
GAAQRIGELTGIEPEVIYLYNGPNGLVSFDMTLKQQFLGAFAAVKDYLVGRGSVTENFDIPGFVNDSYLR
EMFGDEYPQRSASMANPMTLSGFDEICRLPVDDPAQGSELWAAGSDTTDVAATPSCLLRRVAATSEVRAA
YVPDTLTGLRIFADHAVWLQDPSAPPTHRYKPFATSAGAESYRAEHPDADAVSYTAAVGHSRAAR

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. smegmatis MC2 155 MSMEG_1232 - - 100% (485) ABC transporter substrate-binding protein
M. smegmatis MC2 155 MSMEG_0114 - 2e-15 26.22% (286) extracellular solute-binding protein, family protein 3
M. smegmatis MC2 155 MSMEG_2099 - 3e-11 24.49% (245) ABC transporter, substrate binding protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 - - - - -
M. gilvum PYR-GCK Mflv_0723 - 2e-15 25.95% (289) substrate-binding region of ABC-type glycine betaine transport
M. tuberculosis H37Rv - - - - -
M. leprae Br4923 - - - - -
M. abscessus ATCC 19977 MAB_2241 - 1e-114 49.05% (475) putative nitrate ABC transporter, periplasmic protein
M. marinum M - - - - -
M. avium 104 MAV_3400 - 1e-115 50.21% (478) ABC transporter substrate-binding protein
M. thermoresistible (build 8) - - - - -
M. ulcerans Agy99 - - - - -
M. vanbaalenii PYR-1 Mvan_0122 - 2e-14 24.18% (244) substrate-binding region of ABC-type glycine betaine transport

CLUSTAL 2.0.9 multiple sequence alignment


MAB_2241|M.abscessus_ATCC_1997      ------------MKR-TALLASMLIALA---TGCSLDSGSGSSQEVTVVI
MAV_3400|M.avium_104                ------------MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVV
MSMEG_1232|M.smegmatis_MC2_155      MDEAQQDSGGRWRARSAALLAAVTVGGAQLLTGCGLLTEP----TVVVNV
Mflv_0723|M.gilvum_PYR-GCK          --------------MRFKALLVALVAGMLALAGCSVGSGG--------QS
Mvan_0122|M.vanbaalenii_PYR-1       --------------MKLKALLVVLVSAVLALAGCSVDNGG--------QH
                                                       *    :.     :**.: .            

MAB_2241|M.abscessus_ATCC_1997      GYQSKTINTVTAGTLLRAQGYLEKRLGDLTSRTGTKYTVQWQDYDTGAPI
MAV_3400|M.avium_104                GYQSKTINTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQDYDTGAPI
MSMEG_1232|M.smegmatis_MC2_155      GYQSKTINTVNAGTLLRDRGDFEAELKQIGAETGTKYRVVWQDFASGAPL
Mflv_0723|M.gilvum_PYR-GCK          GNDPEKP-TIRIGYQTFPSGDLIVKNNKWLEEALPDHNIKWVKFDSGADV
Mvan_0122|M.vanbaalenii_PYR-1       GDDSGKP-TIRIGYQTFPSGDLIVKNNKWLEEALPDYNIKWTKFDSGADV
                                    * :. .  *:  *      * :  .  .   .: ..: : * .: :** :

MAB_2241|M.abscessus_ATCC_1997      TAQMLAEKIDIGSMGDYPLLINGSKTQANEKARTELVSITGYNAKGSLNM
MAV_3400|M.avium_104                TAQMLAEKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNM
MSMEG_1232|M.smegmatis_MC2_155      TAQMIATHVDIGSMGDYPLLTNGSKTRKYDDAATEMVAITGYNLRGSLNQ
Mflv_0723|M.gilvum_PYR-GCK          NTAFVADELDFGALGSSPVARGLSEPLNIPYQVAFILDVAGDN-----EA
Mvan_0122|M.vanbaalenii_PYR-1       NTAFVAGELDFGALGSSPVARGLSEPLNIPYKVAFVLDVAGDN-----EA
                                    .: ::* .:*:*::*. *:  . *:.       : :: ::* *     : 

MAB_2241|M.abscessus_ATCC_1997      VVVPPNSAITELPELKGKKVSASVGSAGHGTLVRALRNDGLDPTRDVEVL
MAV_3400|M.avium_104                VVVSPESRAKDLADLAGAKVSASVGSAGHGTLVRALSRAGVN---GVEVL
MSMEG_1232|M.smegmatis_MC2_155      VVVPSDSSAQKLEDLTGKKVSTSLGSAGDGMFSSALKGNGIDKN-AVQIV
Mflv_0723|M.gilvum_PYR-GCK          LVARNAAGITTIADLRDKRVATPFASTAHYSLLAALDQNGLSPN-DVQLI
Mvan_0122|M.vanbaalenii_PYR-1       LVVRNGAGVDTIAQLKGRRIGTPFASTAHYSLLAALDQNGLSAN-DVQLI
                                    :*.   :    : :* . ::.:...*:..  :  **   *:.    *:::

MAB_2241|M.abscessus_ATCC_1997      NQQPQVGASALESGQVQALSQFVAWPGLLVFQNKAKLLY-DGAELNVPTF
MAV_3400|M.avium_104                NQQPQVGASALESGQVQALSQFVAWPGLLVFQGKAKLLY-DGAELNLPTL
MSMEG_1232|M.smegmatis_MC2_155      NQDPSVGASAIDGRQVDALAQFVPWPQLVIYRNQGRLLY-DGGDNNVPTF
Mflv_0723|M.gilvum_PYR-GCK          DLQPQAILAAWERGDIDAAYTWLPTLNELRKTGKDLITSRQLAAEGKPTL
Mvan_0122|M.vanbaalenii_PYR-1       DLQPQAILAAWERGDIDAAYTWLPTLDELRKTGRDLITSRQLADAGKPTL
                                    : :*..  :* :  :::*   ::.    :   .:  :   : .  . **:

MAB_2241|M.abscessus_ATCC_1997      HGVVVRRDYATQHPEVLDAFLQAQLDATDFIHEKSLEAARIVAEGSGLPQ
MAV_3400|M.avium_104                HGVVVRRSYAAAHPEVLAAFLQAQLDATDFLNTHPLQAARIVADASGLPP
MSMEG_1232|M.smegmatis_MC2_155      HGVVVRRQFADQRPEVMAAFLRAMRSTTDAIVADPLGAAQRIGELTGIEP
Mflv_0723|M.gilvum_PYR-GCK          DLAVVSSEFAKSHPEVVDTWRKQQARALDVIADDPAAAAKAIAAEVGLTP
Mvan_0122|M.vanbaalenii_PYR-1       DLATVSDEFASAHPEAVDVWRQQQGRALDLIREDPQAAAEAIAAEIGLTP
                                    . ..*  .:*  :**.: .: :    : * :  ..  **. :.   *:  

MAB_2241|M.abscessus_ATCC_1997      EVVYLYNGP-GGTSFDATLKPSLIEAFTSDVPYLKSIGDFAD-LNIDDFV
MAV_3400|M.avium_104                EVVYLYNGP-GGTSFDTTLKPSLTEALKSDVPYLKSIGDFAD-LDVDKFV
MSMEG_1232|M.smegmatis_MC2_155      EVIYLYNGPNGLVSFDMTLKQQFLGAFAAVKDYLVGRGSVTENFDIPGFV
Mflv_0723|M.gilvum_PYR-GCK          EDIEG------QLTQTVFLTPEQVASAEWLGDDGKPGN------------
Mvan_0122|M.vanbaalenii_PYR-1       QDVAG------QLKQMVFLTPQDISSTEWLGTEGNPGN------------
                                    : :          .    *. .   :           .            

MAB_2241|M.abscessus_ATCC_1997      HDGPLRQAYTTRAKNYETELAAMVNPLVLHPA------DGADPGQAAEIW
MAV_3400|M.avium_104                VDEPLRAVFTARGLDYQAARARTTNPSTLR----------GDPALAGELW
MSMEG_1232|M.smegmatis_MC2_155      NDSYLREMFGD---EYPQRSASMANPMTLSGFDEICRLPVDDPAQGSELW
Mflv_0723|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_0122|M.vanbaalenii_PYR-1       --------------------------------------------------
                                                                                      

MAB_2241|M.abscessus_ATCC_1997      FDGKDSTQVYPTAQELLKAVNAANAAGRKVRAAYVADTELGTRWFADHAR
MAV_3400|M.avium_104                LDGADTTQTTADPASLLRAVRDALGRGARVRAAYVPDTEFGTRWFADKAF
MSMEG_1232|M.smegmatis_MC2_155      AAGSDTTDVAATPSCLLRRVAATS----EVRAAYVPDTLTGLRIFADHAV
Mflv_0723|M.gilvum_PYR-GCK          ---------------------------------LAANLQSASEFLAEQKQ
Mvan_0122|M.vanbaalenii_PYR-1       ---------------------------------LAVNLESASQFLADQSQ
                                                                      . :   . . :*::  

MAB_2241|M.abscessus_ATCC_1997      WVQDPAG-----LHPFTTGAGAARYVAAHPGARPLDYAQALAAAS---
MAV_3400|M.avium_104                WVKDGQN-----YLPFGTAAGAGRYLAAHPGSIAVNYQQALGGSV---
MSMEG_1232|M.smegmatis_MC2_155      WLQDPSAPPTHRYKPFATSAGAESYRAEHPDADAVSYTAAVGHSRAAR
Mflv_0723|M.gilvum_PYR-GCK          IPAAAPLN----------TFQDGLYTRGLPGVLTE-------------
Mvan_0122|M.vanbaalenii_PYR-1       IPAAAPLK----------TFQDAVYTKGLPGALNE-------------
                                                            *    *.

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_1232	-	-	100% (485)	ABC transporter substrate-binding protein
M. smegmatis MC2 155	MSMEG_0114	-	2e-15	26.22% (286)	extracellular solute-binding protein, family protein 3
M. smegmatis MC2 155	MSMEG_2099	-	3e-11	24.49% (245)	ABC transporter, substrate binding protein