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M. smegmatis MC2 155 MSMEG_0114 (-)

annotation: extracellular solute-binding protein, family protein 3
coordinates: 137817 - 138845
length: 342

MKLKSLLVATAASALALAGCAVDNSEQDAEKPTIRVGYQTFPSGDLIVKNNGWLEEALPDYNIKWTKFDS
GADVNTAFVAGELDFGALGSSPVARGLSAPLNIPYKVAFVLDVAGDNEALVARDGSGVNSIADLRGKRVA
TPFASTAHYSLLAALAQNGLSPNDVQLIDLQPQAILAAWERGDIAAAYSWLPTLDDLRKTGKDLITSREL
AADGKPTLDLGVVSDKFATEHPDVVDTWREQEARALDVIKDDPDAAAKAIAAEIGLSPEDVAGQLKQGVY
LTPAEVASEQWLGSDGKPGNIAANLQSASEFLAEQKQIPEAAPLGTFEDAIYTKGLPGAISK

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. smegmatis MC2 155 MSMEG_0114 - - 100% (342) extracellular solute-binding protein, family protein 3
M. smegmatis MC2 155 MSMEG_3852 - 1e-19 27.65% (340) aliphatic sulfonate binding protein
M. smegmatis MC2 155 MSMEG_0550 - 2e-18 29.41% (255) sulfonate binding protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 - - - - -
M. gilvum PYR-GCK Mflv_0723 - 1e-158 79.42% (345) substrate-binding region of ABC-type glycine betaine transport
M. tuberculosis H37Rv - - - - -
M. leprae Br4923 - - - - -
M. abscessus ATCC 19977 MAB_2177 - 1e-144 71.93% (342) ABC transporter periplasmic protein
M. marinum M - - - - -
M. avium 104 MAV_3400 - 6e-23 29.07% (289) ABC transporter substrate-binding protein
M. thermoresistible (build 8) TH_2996 - 0.0001 25.81% (186) PUTATIVE putative aliphatic sulfonates family ABC transporter,
M. ulcerans Agy99 - - - - -
M. vanbaalenii PYR-1 Mvan_0122 - 1e-156 77.10% (345) substrate-binding region of ABC-type glycine betaine transport

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_0114|M.smegmatis_MC2_155      ----MKLKSLLVATAASALAL-AGCAVDNSEQ---DAEKPTIRVGYQTFP
Mflv_0723|M.gilvum_PYR-GCK          ----MRFKALLVALVAGMLAL-AGCSVGSGGQSGNDPEKPTIRIGYQTFP
Mvan_0122|M.vanbaalenii_PYR-1       ----MKLKALLVVLVSAVLAL-AGCSVDNGGQHGDDSGKPTIRIGYQTFP
MAB_2177|M.abscessus_ATCC_1997      ----MRLNYLAAALAVAMTML-SGCAIDHSGLQ---NGKPTIRIGYQNFP
MAV_3400|M.avium_104                ---MRRHAALLASVLIAVAALGTGCSLESLSQS---AGVVNVVVGYQSKT
TH_2996|M.thermoresistible__bu      MHTAIEMLRLTLATLISAAAL-TACGATQSPDSPGLPADAALPTEVPPDT
                                         .   *      .   * :.*.               :       .

MSMEG_0114|M.smegmatis_MC2_155      S----GDLIVKNNGWLEEALPDYN--------IKWTKFDSGADVNTAFVA
Mflv_0723|M.gilvum_PYR-GCK          S----GDLIVKNNKWLEEALPDHN--------IKWVKFDSGADVNTAFVA
Mvan_0122|M.vanbaalenii_PYR-1       S----GDLIVKNNKWLEEALPDYN--------IKWTKFDSGADVNTAFVA
MAB_2177|M.abscessus_ATCC_1997      S----GDLVVKQNRWLETALPDYN--------IKWTRFDSGADINTAFIA
MAV_3400|M.avium_104                INTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQDYDTGAPITAQMLA
TH_2996|M.thermoresistible__bu      T-----LVVADDANRLRTLLTLSGEQDRLTGEVSYANFSSGPLRLEAIRT
                                            :      *.  *.           : :  :.:*.     : :

MSMEG_0114|M.smegmatis_MC2_155      GELDFGALGSSPVARGLSAPLNIPYKVAFVLDVAGDN-----EALVARDG
Mflv_0723|M.gilvum_PYR-GCK          DELDFGALGSSPVARGLSEPLNIPYQVAFILDVAGDN-----EALVARNA
Mvan_0122|M.vanbaalenii_PYR-1       GELDFGALGSSPVARGLSEPLNIPYKVAFVLDVAGDN-----EALVVRNG
MAB_2177|M.abscessus_ATCC_1997      RELDFGALGSSPFARGLSAPLNIPYRVAFVLDVAGDN-----EALVASNR
MAV_3400|M.avium_104                EKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPE
TH_2996|M.thermoresistible__bu      GNAHLGYVGDVPPILAHYSDADVPIVGAVRRDGTGAL-------IATSPD
                                     : .:* :*. *           *   :   . :*         :..   

MSMEG_0114|M.smegmatis_MC2_155      SGVNSIADLRGKRVATPFASTAHYSLLAALAQNGLSPNDVQLIDLQPQAI
Mflv_0723|M.gilvum_PYR-GCK          AGITTIADLRDKRVATPFASTAHYSLLAALDQNGLSPNDVQLIDLQPQAI
Mvan_0122|M.vanbaalenii_PYR-1       AGVDTIAQLKGRRIGTPFASTAHYSLLAALDQNGLSANDVQLIDLQPQAI
MAB_2177|M.abscessus_ATCC_1997      SGVSTIAGLKGKRVGTPFASTAHYSLLSALAQNGLSASDVRLVDLQPQAA
MAV_3400|M.avium_104                SRAKDLADLAGAKVSASVGSAGHGTLVRALSRAGVN--GVEVLNQQPQVG
TH_2996|M.thermoresistible__bu      SGITSLSDLAGKRIGVNEGTSQQATLLRNLQSVGLGIGDVEPVYLGLAEF
                                    :    :: * . ::..  .:: : :*:  *   *:.  .*. :       

MSMEG_0114|M.smegmatis_MC2_155      LAAWERGDIAAAYSWLPTLDDLRKTGKDLITSRELAADGKPTLDLGVVSD
Mflv_0723|M.gilvum_PYR-GCK          LAAWERGDIDAAYTWLPTLNELRKTGKDLITSRQLAAEGKPTLDLAVVSS
Mvan_0122|M.vanbaalenii_PYR-1       LAAWERGDIDAAYTWLPTLDELRKTGRDLITSRQLADAGKPTLDLATVSD
MAB_2177|M.abscessus_ATCC_1997      LAAFDRGDVDAVYTWLPTVDQVRKNGRDLITSRQLAADGRPTLDLAVVAN
MAV_3400|M.avium_104                ASALESGQVQALSQFVAWPGLLVFQGKAKLLYDGAELN-LPTLHGVVVRR
TH_2996|M.thermoresistible__bu      ADGLRAEQIQAAVLKQP------DRARYLESTAAEGAIEIPNAPGANTGL
                                      .    :: *     .        .:             *.     .  

MSMEG_0114|M.smegmatis_MC2_155      KFATEHPDVVDTWREQEARALDVIKDDPDAAAKAIAAEIGLSPE------
Mflv_0723|M.gilvum_PYR-GCK          EFAKSHPEVVDTWRKQQARALDVIADDPAAAAKAIAAEVGLTPE------
Mvan_0122|M.vanbaalenii_PYR-1       EFASAHPEAVDVWRQQQGRALDLIREDPQAAAEAIAAEIGLTPQ------
MAB_2177|M.abscessus_ATCC_1997      AFADAHPEIVDAWRRQQARALRLIHDDPSAAAKAIAAENGLTPQ------
MAV_3400|M.avium_104                SYAAAHPEVLAAFLQAQLDATDFLNTHPLQAARIVADASGLPPEVVYLYN
TH_2996|M.thermoresistible__bu      NYLYAGRDALIDPARAAAVREFVIAWYRAELWRNGHQDTWISEY------
                                     :     : :    .       .:        .       :.        

MSMEG_0114|M.smegmatis_MC2_155      -------------DVAGQLKQGVYLTP-----AEVASEQWLGSD------
Mflv_0723|M.gilvum_PYR-GCK          -------------DIEGQLTQTVFLTP-----EQVASAEWLGDD------
Mvan_0122|M.vanbaalenii_PYR-1       -------------DVAGQLKQMVFLTP-----QDISSTEWLGTE------
MAB_2177|M.abscessus_ATCC_1997      -------------EVADQLKQGIYLTP-----AEVGSAKWLGEQ------
MAV_3400|M.avium_104                GPGGTSFDTTLKPSLTEALKSDVPYLKSIGDFADLDVDKFVVDEPLRAVF
TH_2996|M.thermoresistible__bu      --------------LVKDQHVDVDDAR-----KIVESDGVASIP------
                                                  :       :           :               

MSMEG_0114|M.smegmatis_MC2_155      --------------GKPGNIAANLQSASEFLAE-----QKQIPEAAPLGT
Mflv_0723|M.gilvum_PYR-GCK          --------------GKPGNLAANLQSASEFLAE-----QKQIPAAAPLNT
Mvan_0122|M.vanbaalenii_PYR-1       --------------GNPGNLAVNLESASQFLAD-----QSQIPAAAPLKT
MAB_2177|M.abscessus_ATCC_1997      --------------GKPGHIAVDLQSASQFLAD-----QKQIPAAAPLAT
MAV_3400|M.avium_104                TARGLDYQAARARTTNPSTLRGDPALAGELWLDGADTTQTTADPASLLRA
TH_2996|M.thermoresistible__bu      --------------GFTDEVVATQQETIDLLQQ------AGAFAGRELRA
                                                    .. :      : ::  :           .  * :

MSMEG_0114|M.smegmatis_MC2_155      -----FEDAI----------------------------------------
Mflv_0723|M.gilvum_PYR-GCK          -----FQDGL----------------------------------------
Mvan_0122|M.vanbaalenii_PYR-1       -----FQDAV----------------------------------------
MAB_2177|M.abscessus_ATCC_1997      -----FENAV----------------------------------------
MAV_3400|M.avium_104                -----VRDALGRGARVRAAYVPDTEFGTRWFADKAFWVKDGQNYLPFGTA
TH_2996|M.thermoresistible__bu      RDEFDFR-------------------------------------------
                                         ..                                           

MSMEG_0114|M.smegmatis_MC2_155      -----YTKGLPGAISK----------
Mflv_0723|M.gilvum_PYR-GCK          -----YTRGLPGVLTE----------
Mvan_0122|M.vanbaalenii_PYR-1       -----YTKGLPGALNE----------
MAB_2177|M.abscessus_ATCC_1997      -----YTKGLPDAIGR----------
MAV_3400|M.avium_104                AGAGRYLAAHPGSIAVNYQQALGGSV
TH_2996|M.thermoresistible__bu      -----FADLTADSPTENRGGQP----
                                         :    ..

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_0114	-	-	100% (342)	extracellular solute-binding protein, family protein 3
M. smegmatis MC2 155	MSMEG_3852	-	1e-19	27.65% (340)	aliphatic sulfonate binding protein
M. smegmatis MC2 155	MSMEG_0550	-	2e-18	29.41% (255)	sulfonate binding protein