For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPRPVALITGPTSGLGAGFARRYALEGYDLVFVARDQQRLEQLADELHHEAGATVETIAADLAVADDRAR VAERVRQGVRVLVNNAGFATSGEFWTADFARLRAQLDVNVTAVMELTHAALPAMLDAHEGTIINVASVAG LVPGRGSTYSASKAWVVSFTEGLANGLIGTGVGVHALCPGFVRTEFHARAGIDMAGTPSFMWLEVDDVVR DCLADVAKDKVVIVPGLQYKALTTGGRMAPRNLVRAVTKVVGKGRART
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0737 | - | - | 100% (258) | dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4722 | - | 3e-30 | 33.59% (256) | short-chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4859 | - | 1e-21 | 37.44% (195) | oxidoreductase, short chain dehydrogenase/reductase family |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1571 | - | 8e-46 | 40.62% (256) | ketoacyl reductase |
M. gilvum PYR-GCK | Mflv_0244 | - | 1e-115 | 79.07% (258) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv1544 | - | 8e-46 | 40.62% (256) | ketoacyl reductase |
M. leprae Br4923 | MLBr_00429 | - | 9e-34 | 34.80% (250) | putative oxidoreductase |
M. abscessus ATCC 19977 | MAB_4261c | - | 1e-100 | 71.09% (256) | putative short chain dehydrogenase/reductase |
M. marinum M | MMAR_0648 | - | 1e-100 | 70.93% (258) | ketoacyl reductase |
M. avium 104 | MAV_4791 | - | 1e-100 | 70.16% (258) | dehydrogenase |
M. thermoresistible (build 8) | TH_4326 | - | 1e-111 | 77.52% (258) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_0124 | - | 1e-99 | 70.54% (258) | ketoacyl reductase |
M. vanbaalenii PYR-1 | Mvan_0661 | - | 1e-115 | 79.84% (258) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0244|M.gilvum_PYR-GCK -----MTRP----VALITGPTSGLGEGFARRYAVDGYDLVLVARDESRLN Mvan_0661|M.vanbaalenii_PYR-1 -----MSRP----VALITGPTSGLGEGFARRYAVDGFDLVLVARDVERLN TH_4326|M.thermoresistible__bu -----MPRP----VALITGPTSGLGEGFARRYAADGHDLVLVARDVQRLE MSMEG_0737|M.smegmatis_MC2_155 -----MPRP----VALITGPTSGLGAGFARRYALEGYDLVFVARDQQRLE MAB_4261c|M.abscessus_ATCC_199 MAATNSARP----VALITGPTSGLGGGFARKYASQGYDVVLVARDEQRLG MMAR_0648|M.marinum_M -----MPRP----VALITGPTSGIGAGYARRYAQDGYDLILVARDVDRLK MUL_0124|M.ulcerans_Agy99 -----MPRP----VALITGPTSGIGAGYARRYAQDGYDLILVARDVDRLT MAV_4791|M.avium_104 -----MPRP----VALITGPTSGIGAGYARRYASDGYDLVLVARDVDRLT Mb1571|M.bovis_AF2122/97 ---MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLD Rv1544|M.tuberculosis_H37Rv ---MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLD MLBr_00429|M.leprae_Br4923 ---MPIPAPSPEARAVVTGASQNIGEALATELAAHGHSLIVIARREDVLV . * .::**.:..:* * * *. ::.:** . * Mflv_0244|M.gilvum_PYR-GCK TLAAELRDEAGTAVEVIRADLADDADRALVADRLRAG-VQVLVNNAGFGT Mvan_0661|M.vanbaalenii_PYR-1 RLAAELHDEAGTNVEVIRADLADAADRAVVADRLRAG-VRVLVNNAGFGT TH_4326|M.thermoresistible__bu QLAAELRQSAGIDVEVLPADLAVAADRAKVADRLADG-VQVLVNNAGFGT MSMEG_0737|M.smegmatis_MC2_155 QLADELHHEAGATVETIAADLAVADDRARVAERVRQG-VRVLVNNAGFAT MAB_4261c|M.abscessus_ATCC_199 ALADELTCRFGVYAEALPADLADAADRARVADRLAAG-VSVLVNNAGFAT MMAR_0648|M.marinum_M QLAVELEDDAG-NVEILPADLADAAGRDKVAERLSRG-VRVLVNNAGFAT MUL_0124|M.ulcerans_Agy99 QSAVELEDDAG-NVEILPADLADAAGRDKVAERLSRG-VRVLVNNAGFAT MAV_4791|M.avium_104 ALAGELRDRAG-NIEILPADLGDAVDRQRVGERLAGG-VRVLVNNAGFAT Mb1571|M.bovis_AF2122/97 ELADQLRQEHCVGVEVLPLDLADTQARAQLADRLRSDAIAGLCNSAGFGT Rv1544|M.tuberculosis_H37Rv ELADQLRQEHCVGVEVLPLDLADTQARAQLADRLRSDAIAGLCNSAGFGT MLBr_00429|M.leprae_Br4923 DLAARLADKYRVAVEVRPADLTDPSERVKLADELTVRPISILCANAGTAT * .* * ** * :.:.: : * .** .* Mflv_0244|M.gilvum_PYR-GCK SGEFWTTDYAVLQSQLDVNVTAVMQLTHAALPSMLDAGRGTVLNVASVAG Mvan_0661|M.vanbaalenii_PYR-1 SGEFWSADYALLQTQLDVNVTAVMQFTHAALPPMLAAGEGTVLNVASVAG TH_4326|M.thermoresistible__bu SGEFWTADPTLLQAQLDVNVTAVMHLTHAALPPMLDAHRGTIINVASVAG MSMEG_0737|M.smegmatis_MC2_155 SGEFWTADFARLRAQLDVNVTAVMELTHAALPAMLDAHEGTIINVASVAG MAB_4261c|M.abscessus_ATCC_199 AGEFWTAAPELLHSQLDVNVTAVMELTRAALPSMIEAGAGTVINVASVAG MMAR_0648|M.marinum_M SGEFWETEPAALQAQLDVNVTAVMQLTRAALPPMLAAGAGTVINIASVAG MUL_0124|M.ulcerans_Agy99 SGEFWETEPAALQAQLDVNVTAVMQLTRAALPPMLAAGAGTVINIASVAG MAV_4791|M.avium_104 SGDFWHTDPALLQSQLDVNVTAVMHLTRAALPAMLDAGAGTVINIASIAG Mb1571|M.bovis_AF2122/97 SGRFWELPFARESEEVVLNALALMELTHAALPGMVKRGAGAVLNIASIAG Rv1544|M.tuberculosis_H37Rv SGRFWELPFARESEEVVLNALALMELTHAALPGMVKRGAGAVLNIASIAG MLBr_00429|M.leprae_Br4923 FGPVSALDPAGEKAQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAG * . :: :*. *: .:* *.** *: * :: .* ** Mflv_0244|M.gilvum_PYR-GCK LLPG-RGSTYSASKAWVVSFTEGLANGLDGTGVGVHALCPGFVHTEFHER Mvan_0661|M.vanbaalenii_PYR-1 LLPG-RGSTYSASKAWVVSFSEGLANGLGGTGVGVHALCPGFVHTEFHER TH_4326|M.thermoresistible__bu LLPG-RGSTYSASKAWVIAFSEGLANGLTGTGVGIHVVCPGFVRTEFHQR MSMEG_0737|M.smegmatis_MC2_155 LVPG-RGSTYSASKAWVVSFTEGLANGLIGTGVGVHALCPGFVRTEFHAR MAB_4261c|M.abscessus_ATCC_199 LVSG-RGSTYSASKAWVVSFTEGLANGLLGTGVGMHVLCPGFIHTEFHER MMAR_0648|M.marinum_M LLSG-RGSTYSASKAWVISFSEGLSTGLEGTGVGVHAVCPGYVHTEFHAR MUL_0124|M.ulcerans_Agy99 LLSG-RGSTYSASKAWVISFSEGLSTGLEGTGVGVHAVCPGYVHTEFHAR MAV_4791|M.avium_104 LLPG-RGSTYSASKAWVISFSEGLSVGLQGTGVSVHAVCPGYVRTEFHAR Mb1571|M.bovis_AF2122/97 FQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWAEI Rv1544|M.tuberculosis_H37Rv FQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWAEI MLBr_00429|M.leprae_Br4923 NSPIPYNATYAATKAFANTFSESLRGELHGSGVHVTLLAPGPVRTELPDH . :.*:*:**:. :*:*.: * *:** : :.** : ** Mflv_0244|M.gilvum_PYR-GCK AGID--MAGTAGFLWLEVDDVVRETMADVAKNRVVIIPGLQYKALTTGGR Mvan_0661|M.vanbaalenii_PYR-1 AGID--MAGTASFLWLEVDDVVRETMASIAKHKVVIIPGLQYKALTTGGR TH_4326|M.thermoresistible__bu AGID--MSGTPSILYLDVDDVVRTTVARVRKGDVVIVPGLQYKVLTTVGR MSMEG_0737|M.smegmatis_MC2_155 AGID--MAGTPSFMWLEVDDVVRDCLADVAKDKVVIVPGLQYKALTTGGR MAB_4261c|M.abscessus_ATCC_199 AGIE--MGTIPEFMWLQVDDVVNACLHDIAAGKVLIVPGVQYKAITSVTR MMAR_0648|M.marinum_M AGID--MTKLPSFMWLDVDDVIQESLADIADGKVISIPGVQYKALVGAGR MUL_0124|M.ulcerans_Agy99 AGID--MTKLPSFMWLDVDDVIQESLADIADGKVIGIPGVQYKALVGAGR MAV_4791|M.avium_104 AGID--MSKSPSFLWLQVDDVVDQSLADIARGKVISIPGLQYKAIVAAER Mb1571|M.bovis_AF2122/97 ASA---ERFSIPLAQVSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGR Rv1544|M.tuberculosis_H37Rv ASA---ERFSIPLAQVSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGR MLBr_00429|M.leprae_Br4923 DEASLVEKLVPDFLWISTEHTARLSLDALERNKMRVVPGLTSKAMSVASR : :. ... : : :**: * : * Mflv_0244|M.gilvum_PYR-GCK LVPRNVVRALTKVVGKGRGRT--- Mvan_0661|M.vanbaalenii_PYR-1 MVPRNLVRALTKVVGKGRGRT--- TH_4326|M.thermoresistible__bu LVPRKLVRALTKVVGKGRGRT--- MSMEG_0737|M.smegmatis_MC2_155 MAPRNLVRAVTKVVGKGRART--- MAB_4261c|M.abscessus_ATCC_199 LIPRGLVRKYNSVVGRGRGRT--- MMAR_0648|M.marinum_M MIPRGLLRAVMKRVGGGRGRT--- MUL_0124|M.ulcerans_Agy99 MIPRGLLRAVMKRVGGGRGRT--- MAV_4791|M.avium_104 LIPRTLMRAITKRVGGGRGRT--- Mb1571|M.bovis_AF2122/97 FAPRSLLLPAIR-IGNRLRGGPSR Rv1544|M.tuberculosis_H37Rv FAPRSLLLPAIR-IGNRLRGGPSR MLBr_00429|M.leprae_Br4923 YAPRAIVASIVGNFYKKLGGG--- ** :: .