For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRRLRLPAFIRSASLRTRVAVAAAAAASAVVAAFTILTSVVLASNDAAQLDRRLDAIVDASINPEHLQDP QRGVLTTGRTRTGGQVVFQRGFQLPALPPGTATVEVNGVDYRVRTVSVDQQGGIMMSIGIRADSILLSAN RIPLYAAVGVVTVLVAAGLGWLLAGPAIRPLRKLTEHTSKLGSGGPDTLPEVRGVREAEDLSEAMSGMLT RLAAAQRATTNSLQAAQDFAANAAHELRTPLTAMRADLDTLRIHDLPEDERDEVVADLSRAQRRVEAIIT ALGQLASGQLAQAEDRELIDITDMLDRVARENTRADTGVRIEVHADDDVGLVLGWPGGLRIAVDNLVRNA ITHGEAGRVVVSAHRTGQMLTIVVDDNGRGLPVEEHETVLGRFRRGSTAVAGGSGLGLALVAQQAELHGG QIKLSDGPLGGLRATLTVSIAPTGPTDQLA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0246 | - | - | 100% (450) | sensor-type histidine kinase PrrB |
M. smegmatis MC2 155 | MSMEG_5663 | - | 7e-83 | 41.88% (437) | sensor-type histidine kinase PrrB |
M. smegmatis MC2 155 | MSMEG_2793 | - | 1e-73 | 40.83% (458) | sensor-type histidine kinase PrrB |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0926c | prrB | 6e-78 | 40.86% (443) | two component sensor histidine kinase PRRB |
M. gilvum PYR-GCK | Mflv_0460 | - | 0.0 | 76.92% (442) | integral membrane sensor signal transduction histidine kinase |
M. tuberculosis H37Rv | Rv0902c | prrB | 6e-78 | 40.86% (443) | two component sensor histidine kinase PRRB |
M. leprae Br4923 | MLBr_02124 | - | 6e-80 | 40.50% (442) | sensor histidine kinase |
M. abscessus ATCC 19977 | MAB_1927 | - | 1e-126 | 58.47% (431) | putative sensor-type histidine kinase PrrB |
M. marinum M | MMAR_4634 | prrB | 9e-77 | 41.52% (448) | two-component sensor histidine kinase PrrB |
M. avium 104 | MAV_1021 | - | 3e-78 | 40.78% (434) | sensor-type histidine kinase PrrB |
M. thermoresistible (build 8) | TH_0454 | - | 2e-79 | 40.68% (440) | sensor-type histidine kinase PrrB |
M. ulcerans Agy99 | MUL_0249 | prrB | 2e-76 | 41.29% (448) | two component sensor histidine kinase PrrB |
M. vanbaalenii PYR-1 | Mvan_0192 | - | 0.0 | 78.10% (443) | integral membrane sensor signal transduction histidine kinase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4634|M.marinum_M MTVMNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKE MUL_0249|M.ulcerans_Agy99 ---MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKE Mb0926c|M.bovis_AF2122/97 ---MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKE Rv0902c|M.tuberculosis_H37Rv ---MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKE MLBr_02124|M.leprae_Br4923 ---MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKE MAV_1021|M.avium_104 ---MKLLSRIVTRTPSLRARVAVATAIGTAIVVVIAGAVVWFGITSAWRE TH_0454|M.thermoresistible__bu ---MNLVTRLFRRTPSLRTRVAFATAIAAAIVVGIVGVVVWVGITNDRKE Mflv_0460|M.gilvum_PYR-GCK ----MPRLPRFLSSASLRTRVAIASAAAAAAVVAAFTILTSLVLANNDAA Mvan_0192|M.vanbaalenii_PYR-1 -MLTLPRLPRFLRSASLRTRVAIAAAAAAAAVVAAFTILTSLVLANNDEA MSMEG_0246|M.smegmatis_MC2_155 --MRRLRLPAFIRSASLRTRVAVAAAAAASAVVAAFTILTSVVLASNDAA MAB_1927|M.abscessus_ATCC_1997 ----------MKRSLSLRTRVAVAAFLAAGLVVALIGIVAGIALVRNDTR . : ***:**..*: .:. * :. . :. MMAR_4634|M.marinum_M RLDRRLDEAAGFAIPFVPRGLDEIPRSPNDQDALITVRRGDLVKSNSDIT MUL_0249|M.ulcerans_Agy99 RLDRRLDEAAGFAIPFVPRGLDEIPRSPNDQDALITVRRGDLVKSNSDIT Mb0926c|M.bovis_AF2122/97 RLDRRLDEAAGFAIPFVPRGLDEIPRSPNDQDALITVRRGNVIKSNSDIT Rv0902c|M.tuberculosis_H37Rv RLDRRLDEAAGFAIPFVPRGLDEIPRSPNDQDALITVRRGNVIKSNSDIT MLBr_02124|M.leprae_Br4923 RLDRKLDEAAGFAIPFVPRGLDEIPRSPNDQDAIITVRRGNLVKSNFDIT MAV_1021|M.avium_104 RLDRRLDETAGFAIPFLPRGLNEIPRSPKDQDTVITVRRDGQVKSNSDVT TH_0454|M.thermoresistible__bu RLDRRLDEAAGFALPFVPRGLEQIPPSPNDQDVVITVRRGDEVRSNSEVV Mflv_0460|M.gilvum_PYR-GCK QLDRRLDAIVDASV-----FPDQLTDPRRGVLQTGRSRSSGQVVFQRGFQ Mvan_0192|M.vanbaalenii_PYR-1 QLDRRLDAIVDASM-----FPDQLSDPRRGVLQTGRSRSSGDVVFQRGFQ MSMEG_0246|M.smegmatis_MC2_155 QLDRRLDAIVDASI-----NPEHLQDPQRGVLTTGRTRTGGQVVFQRGFQ MAB_1927|M.abscessus_ATCC_1997 QLDRRLDMLTDAVQ-----ATTRHGETT-FVLTVRDTKSGGLVIFR-GVE :***:** .. . . : .. : . . MMAR_4634|M.marinum_M LPKLQKDYADTYIRGVRYRVRTVEIPGPEPTSVAVGATYDATIAETNNLH MUL_0249|M.ulcerans_Agy99 LPKLQEDYADTYIRGVRYRVRTVEIPGPEPTSVAVGATYDATIAETNNLH Mb0926c|M.bovis_AF2122/97 LPKLQDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATVAETNNLH Rv0902c|M.tuberculosis_H37Rv LPKLQDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATVAETNNLH MLBr_02124|M.leprae_Br4923 LPKLTNDYADTYLRGVRYRVRTVEIPAPEPTSIAVGATYDATVAETNNLH MAV_1021|M.avium_104 LPPMEEGYADTYINGVRYRVRTVEVRTPQPATVEVGATYDDTIAQTNNLH TH_0454|M.thermoresistible__bu LPELDADYADTYIDGVRYRVRTVQTPYPIRTTLAVGATYDDTIADTANLH Mflv_0460|M.gilvum_PYR-GCK LPPLPPGTETVIVNGVEYRVRTIPVDEGGGVLMSIGIRADSILLSAARVP Mvan_0192|M.vanbaalenii_PYR-1 LPPLPPGTDTVMVNGVEYRVRTIPVEQGGGVLMSIGIRADSILLSRARIP MSMEG_0246|M.smegmatis_MC2_155 LPALPPGTATVEVNGVDYRVRTVSVDQQGGIMMSIGIRADSILLSANRIP MAB_1927|M.abscessus_ATCC_1997 LPRLPLGTRNVTVGDVNYRVRTIENPEEQ-TVISLGTRSDTVLVNHRGIP ** : . . : .* *****: : :* * : . : MMAR_4634|M.marinum_M RRVLLICTFAIGAATVFAWLLAVFAVRPFKQLAEQTRSIDAGDEAPRVEV MUL_0249|M.ulcerans_Agy99 RRVLLICTFAIGAATVFAWLLAVFAVRPFKQLAEQTRSIDAGDEAPRVEV Mb0926c|M.bovis_AF2122/97 RRVLLICTFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEV Rv0902c|M.tuberculosis_H37Rv RRVLLICTFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEV MLBr_02124|M.leprae_Br4923 RRVLLICGFAIAAAAVFAWLLAAFAVRPFKQLAQQTRSVDAGGEAPRVEV MAV_1021|M.avium_104 RRVILICALSIGAAAVFAWLLAAFAVRPFKRLAQQARSIDA-DERPQVAV TH_0454|M.thermoresistible__bu RRVILICTLAIGAATIAGWLLAAFAVRPFKQLAAQARSIDAGDEVPDVEI Mflv_0460|M.gilvum_PYR-GCK -FYIGVGVVTVLLAGVLGWLLAGPAIRPLRKLTEHTKQLG-DGAEQIPAV Mvan_0192|M.vanbaalenii_PYR-1 -FYVGVGVVTVLIAGVLGWLLAGPAIRPLRKLTEHTKRLD-HETEQMPAV MSMEG_0246|M.smegmatis_MC2_155 -LYAAVGVVTVLVAAGLGWLLAGPAIRPLRKLTEHTSKLGSGGPDTLPEV MAB_1927|M.abscessus_ATCC_1997 -VFIALGVLSMLLAGGFAWLFAGRAVRPLHQLTDQTRQLD-TDGLQVAAV : .:: * .**:* *:**:::*: :: :. : MMAR_4634|M.marinum_M HGASEAIEIAEAMRGMLQRIWNEQIRTKEALASARDFAAVSSHELRTPLT MUL_0249|M.ulcerans_Agy99 HGASEAIEIAEGMRGMLQRIWNEQIRTKEALASARDFAAVSSHELRTPLT Mb0926c|M.bovis_AF2122/97 HGASEAIEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLT Rv0902c|M.tuberculosis_H37Rv HGASEAIEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLT MLBr_02124|M.leprae_Br4923 HGATEAVEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLT MAV_1021|M.avium_104 RGASEAVEIAEAMRGMLQRIWKEQDRTKEALASARDFSAVTAHELRSPLT TH_0454|M.thermoresistible__bu RGATEAVEIADAVKGMLQRIWKEQDRTKAALASARDFASAAAHELRTPLT Mflv_0460|M.gilvum_PYR-GCK RGVREAEDLSEAMSAMLDRLAAAQRVTTNSLQAAQDFAANAAHELRTPLT Mvan_0192|M.vanbaalenii_PYR-1 RGVREAEDLSEAMSAMLDRLAAAQRATTNSLQAAQDFAANAAHELRTPLT MSMEG_0246|M.smegmatis_MC2_155 RGVREAEDLSEAMSGMLTRLAAAQRATTNSLQAAQDFAANAAHELRTPLT MAB_1927|M.abscessus_ATCC_1997 RGARESEELAEAMAAMLSRVSAAQSETTKSLLAARDFAASAAHELRTPLT :*. *: ::::.: .** *: * *. :* :*:**:: ::****:*** MMAR_4634|M.marinum_M AMRTNLEVLSTLDLPDDQRKEVLNDVIRTQSRIEATLGALERLAQGELST MUL_0249|M.ulcerans_Agy99 AMRTNLEVLSTLDLPDDQRKEVLNDVIRTQSRIEATLGALERLAQGELST Mb0926c|M.bovis_AF2122/97 AMRTNLEVLSTLDLPDDQRKEVLNDVIRTQSRIEATLSALERLAQGELST Rv0902c|M.tuberculosis_H37Rv AMRTNLEVLSTLDLPDDQRKEVLNDVIRTQSRIEATLSALERLAQGELST MLBr_02124|M.leprae_Br4923 AMRTNLEVLATLDLADDQRKEVLGDVIRTQSRIEATLSALERLAQGELST MAV_1021|M.avium_104 AMRTNLEVLSTLDMPDEQRKEVLGDVIRTQSRIEATLTALERLAQGELST TH_0454|M.thermoresistible__bu AMRTNLEVLSTLDMPEEQRKEVLADVIRTQSRIEATLSALERLAQGELST Mflv_0460|M.gilvum_PYR-GCK AMRADLDTLRIHNLPDEERDEVVADLARAQRRVEGIITALGQLASGQLAQ Mvan_0192|M.vanbaalenii_PYR-1 AMRADLDTLRIHNLPDDEREEVVADLSRAQRRVEGIITALGQLASGQLAQ MSMEG_0246|M.smegmatis_MC2_155 AMRADLDTLRIHDLPEDERDEVVADLSRAQRRVEAIITALGQLASGQLAQ MAB_1927|M.abscessus_ATCC_1997 AMRADLDTLRAHDLSGDERVEVIGDLQRAQRRVEATITALGQLASGDLAR ***::*:.* ::. ::* **: *: *:* *:*. : ** :**.*:*: MMAR_4634|M.marinum_M SEDHVPVDITELLDRAAHDAMRIYPDLDVSLVPSPTC-IIVGLPAGLRLA MUL_0249|M.ulcerans_Agy99 SEDHVPVDITELLDRAAHDAMRIYPDLDVSLVPSPTC-IIVGLPAGLRLA Mb0926c|M.bovis_AF2122/97 SDDHVPVDITDLLDRAAHDAARIYPDLDVSLVPSPTC-IIVGLPAGLRLA Rv0902c|M.tuberculosis_H37Rv SDDHVPVDITDLLDRAAHDAARIYPDLDVSLVPSPTC-IIVGLPAGLRLA MLBr_02124|M.leprae_Br4923 SDDHVPVDITELLDRAAHDATRSYPELKVSLVPSPTC-IIVGLPAGLRLA MAV_1021|M.avium_104 SEDHVPVDITELLDRAAHDAMRIYPGLDVSLVPSPTC-IIVGLPAGLRLA TH_0454|M.thermoresistible__bu SDDHVPVDITELLDRAAHEAMRIYPDLEVSLVPAPTV-IIVGLPAGLRLA Mflv_0460|M.gilvum_PYR-GCK VEDREQIDVADLLDRVARENMRVSRDVQIDIDAVDDLGSVQGWPSGLRLA Mvan_0192|M.vanbaalenii_PYR-1 AEDREVIDVTDMLERVARENMRVRRDVQIDIDAADDLGTVLGWPGGLRLA MSMEG_0246|M.smegmatis_MC2_155 AEDRELIDITDMLDRVARENTRADTGVRIEVHADDDVGLVLGWPGGLRIA MAB_1927|M.abscessus_ATCC_1997 TEDRELVDIADLLDRVAGDALMHRADAPEITVHADDCGVVLGWPDGLRLA :*: :*::::*:*.* : : * * ***:* MMAR_4634|M.marinum_M VDNAIANAVKHGGSTRVQLSAVSSRAGVEIAVDDNGSGVPEAERQMVFER MUL_0249|M.ulcerans_Agy99 VDNAIANAVKHGGSTRVQLSAVSSRAGVEIAVDDNGSGVPEAERQMVFER Mb0926c|M.bovis_AF2122/97 VDNAIANAVKHGGATLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFER Rv0902c|M.tuberculosis_H37Rv VDNAIANAVKHGGATLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFER MLBr_02124|M.leprae_Br4923 VDNAVANAVKHGGATRVQLSAVSSRAGVEIAVDDNGSGVPEDERQVVFER MAV_1021|M.avium_104 VDNAIANAVKHGGATRVQLSAVSSRAGVEIAVDDNGSGVPEDERQVVFDR TH_0454|M.thermoresistible__bu VDNAIANAVKHGGATRVQLSAVSSREGVEIAIDDNGTGVPEEERERVFDR Mflv_0460|M.gilvum_PYR-GCK VDNLVRNAVTHGQASQIVLSARREDSAMTIVVDDNGRGLPADEHQTVLGR Mvan_0192|M.vanbaalenii_PYR-1 VDNLVRNAATHGEATRIVLAARRDGGAVTIVVDDNGRGLPADEHEAVLGR MSMEG_0246|M.smegmatis_MC2_155 VDNLVRNAITHGEAGRVVVSAHRTGQMLTIVVDDNGRGLPVEEHETVLGR MAB_1927|M.abscessus_ATCC_1997 VDNLVRNAINHGEARHIVLSANRIDNRLVIEVDDDGPGLPEADRERVLGR *** : ** .** : : ::* : * :**:* *:* ::: *: * MMAR_4634|M.marinum_M FSRGSTASHSGSGLGLALVAQQAHLHGGTASLQNSPLGGARLLLKLPGPS MUL_0249|M.ulcerans_Agy99 FSRGSTASHSGSGLGLALVAQQAHLHGGTASLQNSPLGGARLLLKLPGPS Mb0926c|M.bovis_AF2122/97 FSRGSTASHSGSGLGLALVAQQAQLHGGTASLENSPLGGARLVLRLPGPS Rv0902c|M.tuberculosis_H37Rv FSRGSTASHSGSGLGLALVAQQAQLHGGTASLENSPLGGARLVLRLPGPS MLBr_02124|M.leprae_Br4923 FSRGSTASHSGSGLGLALVAQQAQLHGGTASLETSPLGGARLLLRISAPS MAV_1021|M.avium_104 FSRGSTASQSGSGLGLALVAQQAQLHGGTAALENSPLGGARLVLRLPGPS TH_0454|M.thermoresistible__bu FTRGSTASHSGSGLGLALVAQQAEIHGGTASLEASPLGGARLVLRLPGPR Mflv_0460|M.gilvum_PYR-GCK FSRGSTAAPGGSGLGLALVAQQAALHGGTIELTDSPLGGLRATLTISTSL Mvan_0192|M.vanbaalenii_PYR-1 FSRGSNAAPGGSGLGLALVAQQAALHGGTITLSDGPLGGLRATFTISNEP MSMEG_0246|M.smegmatis_MC2_155 FRRGSTAVAGGSGLGLALVAQQAELHGGQIKLSDGPLGGLRATLTVSIAP MAB_1927|M.abscessus_ATCC_1997 FERGPGAKPGGLGLGLALVAQQAALHGGDVVLSSSPLGGLRATLTIAAE- * **. * .* *********** :*** * .**** * : :. MMAR_4634|M.marinum_M -------- MUL_0249|M.ulcerans_Agy99 -------- Mb0926c|M.bovis_AF2122/97 -------- Rv0902c|M.tuberculosis_H37Rv -------- MLBr_02124|M.leprae_Br4923 -------- MAV_1021|M.avium_104 -------- TH_0454|M.thermoresistible__bu -------- Mflv_0460|M.gilvum_PYR-GCK VPLGDPES Mvan_0192|M.vanbaalenii_PYR-1 APQQDSDS MSMEG_0246|M.smegmatis_MC2_155 TGPTDQLA MAB_1927|M.abscessus_ATCC_1997 --------