For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGFAIPFVPRGLDE IPRSPNDQDALITVRRGNVIKSNSDITLPKLQDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATV AETNNLHRRVLLICTFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAM RGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLTAMRTNLEVLSTLDLPDDQRKEVLNDVIRTQSRI EATLSALERLAQGELSTSDDHVPVDITDLLDRAAHDAARIYPDLDVSLVPSPTCIIVGLPAGLRLAVDNA IANAVKHGGATLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERFSRGSTASHSGSGLGLALVAQQAQ LHGGTASLENSPLGGARLVLRLPGPS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0926c | prrB | - | 100% (446) | two component sensor histidine kinase PRRB |
M. bovis AF2122 / 97 | Mb1008 | mprB | 7e-30 | 29.76% (336) | two component sensor kinase MprB |
M. bovis AF2122 / 97 | Mb3790c | - | 7e-25 | 28.34% (307) | putative two component sensor kinase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1743 | - | 0.0 | 76.46% (446) | integral membrane sensor signal transduction histidine kinase |
M. tuberculosis H37Rv | Rv0902c | prrB | 0.0 | 100.00% (446) | two component sensor histidine kinase PRRB |
M. leprae Br4923 | MLBr_02124 | - | 0.0 | 92.38% (446) | sensor histidine kinase |
M. abscessus ATCC 19977 | MAB_0955c | - | 1e-135 | 59.27% (437) | sensor histidine kinase PrrB |
M. marinum M | MMAR_4634 | prrB | 0.0 | 95.07% (446) | two-component sensor histidine kinase PrrB |
M. avium 104 | MAV_1021 | - | 0.0 | 82.74% (446) | sensor-type histidine kinase PrrB |
M. smegmatis MC2 155 | MSMEG_5663 | - | 0.0 | 81.35% (445) | sensor-type histidine kinase PrrB |
M. thermoresistible (build 8) | TH_0454 | - | 0.0 | 80.90% (445) | sensor-type histidine kinase PrrB |
M. ulcerans Agy99 | MUL_0249 | prrB | 0.0 | 94.84% (446) | two component sensor histidine kinase PrrB |
M. vanbaalenii PYR-1 | Mvan_5010 | - | 0.0 | 79.86% (442) | integral membrane sensor signal transduction histidine kinase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0926c|M.bovis_AF2122/97 ----------------------MNILSRIFARTP---SLRTRVVVATAIG Rv0902c|M.tuberculosis_H37Rv ----------------------MNILSRIFARTP---SLRTRVVVATAIG MMAR_4634|M.marinum_M -------------------MTVMNILSRIFARTP---SLRTRVVVATAIG MUL_0249|M.ulcerans_Agy99 ----------------------MNILSRIFARTP---SLRTRVVVATAIG MLBr_02124|M.leprae_Br4923 ----------------------MNILSRIFARTP---SLRTRVVVATAIG MAV_1021|M.avium_104 ----------------------MKLLSRIVTRTP---SLRARVAVATAIG MSMEG_5663|M.smegmatis_MC2_155 ----------------------MSMLTRIFRRTP---SLRTRVAFATAIG TH_0454|M.thermoresistible__bu ----------------------MNLVTRLFRRTP---SLRTRVAFATAIA Mflv_1743|M.gilvum_PYR-GCK ----------------------MSALSRFVRRTP---SLRQRVAFTSAIA Mvan_5010|M.vanbaalenii_PYR-1 ----------------------MIALSRIFRRTP---SLRTRVAFATAIA MAB_0955c|M.abscessus_ATCC_199 MSTSHENPPVMGRPSKHRSQRITDLSYRLLEKPMRIFSLRTLVAIA-ALG *:. :. *** *..: *:. Mb0926c|M.bovis_AF2122/97 AAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGF-AIPFVPRGLDEIPRS Rv0902c|M.tuberculosis_H37Rv AAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGF-AIPFVPRGLDEIPRS MMAR_4634|M.marinum_M AAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGF-AIPFVPRGLDEIPRS MUL_0249|M.ulcerans_Agy99 AAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGF-AIPFVPRGLDEIPRS MLBr_02124|M.leprae_Br4923 AAIPVLIVGTVVWVGITNDRKERLDRKLDEAAGF-AIPFVPRGLDEIPRS MAV_1021|M.avium_104 TAIVVVIAGAVVWFGITSAWRERLDRRLDETAGF-AIPFLPRGLNEIPRS MSMEG_5663|M.smegmatis_MC2_155 AAIVVVIVGTIVWIGITNDRKERLDRRLDEAAGF-AIPFLPRGLDQIPRS TH_0454|M.thermoresistible__bu AAIVVGIVGVVVWVGITNDRKERLDRRLDEAAGF-ALPFVPRGLEQIPPS Mflv_1743|M.gilvum_PYR-GCK GAIVVLIAGTVVWFGITDAWNERLDRRLDEAAGF-VIPFLPRGLDEIPPS Mvan_5010|M.vanbaalenii_PYR-1 AAIVVGIVGTVVWVGITNDRQERLDRRLDEAAGF-AIPLLPRSLDEIPKS MAB_0955c|M.abscessus_ATCC_199 VMVLVVTLGTWVWLGVEEDQYSQLDRRLDSVSSLGAVSNLLNSVISSDKK : * *. **.*: . .:***:**..:.: .:. : ..: . . Mb0926c|M.bovis_AF2122/97 PNDQD-ALITVR-RGNVIKSNSDITLPKLQDDYADTYVRGVRYRVRTVEI Rv0902c|M.tuberculosis_H37Rv PNDQD-ALITVR-RGNVIKSNSDITLPKLQDDYADTYVRGVRYRVRTVEI MMAR_4634|M.marinum_M PNDQD-ALITVR-RGDLVKSNSDITLPKLQKDYADTYIRGVRYRVRTVEI MUL_0249|M.ulcerans_Agy99 PNDQD-ALITVR-RGDLVKSNSDITLPKLQEDYADTYIRGVRYRVRTVEI MLBr_02124|M.leprae_Br4923 PNDQD-AIITVR-RGNLVKSNFDITLPKLTNDYADTYLRGVRYRVRTVEI MAV_1021|M.avium_104 PKDQD-TVITVR-RDGQVKSNSDVTLPPMEEGYADTYINGVRYRVRTVEV MSMEG_5663|M.smegmatis_MC2_155 PNDQD-AVITVR-QTGAVTSNSTVVLPELPAGYADTYIDGVRWRVRTVEI TH_0454|M.thermoresistible__bu PNDQD-VVITVR-RGDEVRSNSEVVLPELDADYADTYIDGVRYRVRTVQT Mflv_1743|M.gilvum_PYR-GCK PNDQD-VVITVRRDGGDAASNSTVVLPEMEPGYADTYLDGVRYRVRTVEL Mvan_5010|M.vanbaalenii_PYR-1 PNGQD-ALITVR-TGGQVTSNSNVVLPELEPGYADTYVDGVRYRVRTVAL MAB_0955c|M.abscessus_ATCC_199 LDTPDGLVLTARVAGLTKSIPTDTELPLLEPGYANTKINGVEYRVR--SF . * ::*.* ** : .**:* : **.:*** Mb0926c|M.bovis_AF2122/97 PGPEPTSVAVGATYDATVAETNNLHRRVLLICTFAIGAAAVFAWLLAAFA Rv0902c|M.tuberculosis_H37Rv PGPEPTSVAVGATYDATVAETNNLHRRVLLICTFAIGAAAVFAWLLAAFA MMAR_4634|M.marinum_M PGPEPTSVAVGATYDATIAETNNLHRRVLLICTFAIGAATVFAWLLAVFA MUL_0249|M.ulcerans_Agy99 PGPEPTSVAVGATYDATIAETNNLHRRVLLICTFAIGAATVFAWLLAVFA MLBr_02124|M.leprae_Br4923 PAPEPTSIAVGATYDATVAETNNLHRRVLLICGFAIAAAAVFAWLLAAFA MAV_1021|M.avium_104 RTPQPATVEVGATYDDTIAQTNNLHRRVILICALSIGAAAVFAWLLAAFA MSMEG_5663|M.smegmatis_MC2_155 PAPGPMWVAVGATYDATIADTNNLHRRVLVICVFAVGAATVLGWVLAAFA TH_0454|M.thermoresistible__bu PYPIRTTLAVGATYDDTIADTANLHRRVILICTLAIGAATIAGWLLAAFA Mflv_1743|M.gilvum_PYR-GCK ATPQPMSVAVGATYDATIADINNLHRRVLIICTLAIGAATLGGWVLAAFA Mvan_5010|M.vanbaalenii_PYR-1 STPEPMSVAVGATYDATIADTNNLHRRVLIICTLAVGAATFGGWLLAAFA MAB_0955c|M.abscessus_ATCC_199 IAPGNIPVAVGAPVAETQRQIDRYHMRILAICGGVLIGTVIVGWVISLIV * : ***. * : . * *:: ** : .:.. .*::: :. Mb0926c|M.bovis_AF2122/97 VRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQN Rv0902c|M.tuberculosis_H37Rv VRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQN MMAR_4634|M.marinum_M VRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQI MUL_0249|M.ulcerans_Agy99 VRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEGMRGMLQRIWNEQI MLBr_02124|M.leprae_Br4923 VRPFKQLAQQTRSVDAGGEAPRVEVHGATEAVEIAEAMRGMLQRIWNEQN MAV_1021|M.avium_104 VRPFKRLAQQARSIDA-DERPQVAVRGASEAVEIAEAMRGMLQRIWKEQD MSMEG_5663|M.smegmatis_MC2_155 VRPLKRLAEQTREIEAGDEAPDVEVRGATEAVEIAEAVNGMLKRIWKEQD TH_0454|M.thermoresistible__bu VRPFKQLAAQARSIDAGDEVPDVEIRGATEAVEIADAVKGMLQRIWKEQD Mflv_1743|M.gilvum_PYR-GCK VRPFKQLARQTSAIDTGDEEPDIDVRGATEAVEIAEAINGLVQRVWEEQE Mvan_5010|M.vanbaalenii_PYR-1 VRPFKRLAQQTRQIEAGGEAPDIDIRGATEAVEIADAIKGLVERVWEEQG MAB_0955c|M.abscessus_ATCC_199 VSPFRLLAQQARLINAQSNPDDVNVRGVREAVEISEAVEGMLERINTEQE * *:: ** *: ::: .: : ::*. **:**::.:.*:::*: ** Mb0926c|M.bovis_AF2122/97 RTKEALASARDFAAVSSHELRTPLTAMRTNLEVLSTLDLPDDQRKEVLND Rv0902c|M.tuberculosis_H37Rv RTKEALASARDFAAVSSHELRTPLTAMRTNLEVLSTLDLPDDQRKEVLND MMAR_4634|M.marinum_M RTKEALASARDFAAVSSHELRTPLTAMRTNLEVLSTLDLPDDQRKEVLND MUL_0249|M.ulcerans_Agy99 RTKEALASARDFAAVSSHELRTPLTAMRTNLEVLSTLDLPDDQRKEVLND MLBr_02124|M.leprae_Br4923 RTKEALASARDFAAVSSHELRTPLTAMRTNLEVLATLDLADDQRKEVLGD MAV_1021|M.avium_104 RTKEALASARDFSAVTAHELRSPLTAMRTNLEVLSTLDMPDEQRKEVLGD MSMEG_5663|M.smegmatis_MC2_155 RTKSALASARDFASVSAHELRTPLTAMRTNLEVLSTLDLPDEQRKEVVND TH_0454|M.thermoresistible__bu RTKAALASARDFASAAAHELRTPLTAMRTNLEVLSTLDMPEEQRKEVLAD Mflv_1743|M.gilvum_PYR-GCK RTKAALTSARDFASVSAHELRTPLTAMRTNLEVLATLELSEDGRNEVLGD Mvan_5010|M.vanbaalenii_PYR-1 RTKAALASARDFASVSAHELRTPLTAMRTNVEVLATLDLSEEGRKEVVND MAB_0955c|M.abscessus_ATCC_199 KTKAALESARDFAAVASHELRTPLTAMRTNLEVLSTLNLSDDQREEIIEE :** ** *****::.::****:********:***:**::.:: *:*:: : Mb0926c|M.bovis_AF2122/97 VIRTQSRIEATLSALERLAQGELSTSDDHVPVDITDLLDRAAHDAARIYP Rv0902c|M.tuberculosis_H37Rv VIRTQSRIEATLSALERLAQGELSTSDDHVPVDITDLLDRAAHDAARIYP MMAR_4634|M.marinum_M VIRTQSRIEATLGALERLAQGELSTSEDHVPVDITELLDRAAHDAMRIYP MUL_0249|M.ulcerans_Agy99 VIRTQSRIEATLGALERLAQGELSTSEDHVPVDITELLDRAAHDAMRIYP MLBr_02124|M.leprae_Br4923 VIRTQSRIEATLSALERLAQGELSTSDDHVPVDITELLDRAAHDATRSYP MAV_1021|M.avium_104 VIRTQSRIEATLTALERLAQGELSTSEDHVPVDITELLDRAAHDAMRIYP MSMEG_5663|M.smegmatis_MC2_155 VIRTQSRIEATLGALERLAQGELSTTDDHVTVDITELLDRAAHDAMRIYP TH_0454|M.thermoresistible__bu VIRTQSRIEATLSALERLAQGELSTSDDHVPVDITELLDRAAHEAMRIYP Mflv_1743|M.gilvum_PYR-GCK VMRTQTRIEATLGALERLAQGELSTEDDHVPVDITELLDRAAHDAMRVYP Mvan_5010|M.vanbaalenii_PYR-1 VIRTQSRIEATLGALERLAQGELSTEDDHVPVDITELLDRAAHDAMRVYP MAB_0955c|M.abscessus_ATCC_199 TIRTQSRVEATLSALERLAQGQLTTEDDHVPVDITELLDRAAHDADRSYP .:***:*:**** ********:*:* :***.****:*******:* * ** Mb0926c|M.bovis_AF2122/97 DLDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGATLVQLSAVSSRA Rv0902c|M.tuberculosis_H37Rv DLDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGATLVQLSAVSSRA MMAR_4634|M.marinum_M DLDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGSTRVQLSAVSSRA MUL_0249|M.ulcerans_Agy99 DLDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGSTRVQLSAVSSRA MLBr_02124|M.leprae_Br4923 ELKVSLVPSPTCIIVGLPAGLRLAVDNAVANAVKHGGATRVQLSAVSSRA MAV_1021|M.avium_104 GLDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGATRVQLSAVSSRA MSMEG_5663|M.smegmatis_MC2_155 DLEVSLAPSPTVIIVGLPTGLRLSVDNAIANAVKHGGATRVQLSAVSSRE TH_0454|M.thermoresistible__bu DLEVSLVPAPTVIIVGLPAGLRLAVDNAIANAVKHGGATRVQLSAVSSRE Mflv_1743|M.gilvum_PYR-GCK DLDVSLVPAPTVIIVGLPAGLRLAVDNAIANAVKHGGATRVQLSAVSSRD Mvan_5010|M.vanbaalenii_PYR-1 DLEVSLVPAPTVIIVGLPAGLRLAVDNAIANAVKHGGASRVQLSAVSSRE MAB_0955c|M.abscessus_ATCC_199 NLEISLVPSSTILMLGLPAGLRLVIDNAIKNAVKHGGASKIQLSATSTVH *.:**.*:.* :::***:**** :***: *******:: :****.*: Mb0926c|M.bovis_AF2122/97 GVEIAIDDNGSGVPEGERQVVFERFSRGSTASHSGSGLGLALVAQQAQLH Rv0902c|M.tuberculosis_H37Rv GVEIAIDDNGSGVPEGERQVVFERFSRGSTASHSGSGLGLALVAQQAQLH MMAR_4634|M.marinum_M GVEIAVDDNGSGVPEAERQMVFERFSRGSTASHSGSGLGLALVAQQAHLH MUL_0249|M.ulcerans_Agy99 GVEIAVDDNGSGVPEAERQMVFERFSRGSTASHSGSGLGLALVAQQAHLH MLBr_02124|M.leprae_Br4923 GVEIAVDDNGSGVPEDERQVVFERFSRGSTASHSGSGLGLALVAQQAQLH MAV_1021|M.avium_104 GVEIAVDDNGSGVPEDERQVVFDRFSRGSTASQSGSGLGLALVAQQAQLH MSMEG_5663|M.smegmatis_MC2_155 GVEIAIDDNGVGVPEGERALVFDRFARGSTASRSGSGLGLALVAQQAELH TH_0454|M.thermoresistible__bu GVEIAIDDNGTGVPEEERERVFDRFTRGSTASHSGSGLGLALVAQQAEIH Mflv_1743|M.gilvum_PYR-GCK GVEIAIDDDGVGVPEAEREVVFDRFSRGSTASQSGSGLGLALVAQQAELH Mvan_5010|M.vanbaalenii_PYR-1 GVEIAIDDDGVGVPEEERTVVFDRFSRGSTASHSGSGLGLALVAQQAELH MAB_0955c|M.abscessus_ATCC_199 GVEIAVDDNGSGIPEAERVQVFERFSRGSTASHSGSGLGLALVAQQAELH *****:**:* *:** ** **:**:******:**************.:* Mb0926c|M.bovis_AF2122/97 GGTASLENSPLGGARLVLRLPGPS Rv0902c|M.tuberculosis_H37Rv GGTASLENSPLGGARLVLRLPGPS MMAR_4634|M.marinum_M GGTASLQNSPLGGARLLLKLPGPS MUL_0249|M.ulcerans_Agy99 GGTASLQNSPLGGARLLLKLPGPS MLBr_02124|M.leprae_Br4923 GGTASLETSPLGGARLLLRISAPS MAV_1021|M.avium_104 GGTAALENSPLGGARLVLRLPGPS MSMEG_5663|M.smegmatis_MC2_155 GGTATLAESPLGGARLLLRLPGPR TH_0454|M.thermoresistible__bu GGTASLEASPLGGARLVLRLPGPR Mflv_1743|M.gilvum_PYR-GCK GGTASLGSSPLGGARLLLRLPGPH Mvan_5010|M.vanbaalenii_PYR-1 GGTASLEASPLGGARLLLRLPGPR MAB_0955c|M.abscessus_ATCC_199 GGTAALESSPLGGARLVLRLPGH- ****:* ********:*::..