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M. marinum M MMAR_3133 (fadD14_1)

annotation: medium chain fatty-acid-CoA ligase FadD14_1
coordinates: 3817480 - 3819093
length: 537

QDVQLTISAIVRHAASIHGNSEVITPDGIGYRSMSYRSVLGRAGRLANALRGLGITADQRVATFQWSNQE
HLEAYCAVPSMGAVLHTLNIRLAPEQLAYIANHASDQIILVDASVAPLLASALPAMESVHTVIATGGGDL
APLQRCGKTVLRYEEILAQQPETFDWPEIDERSAAAMCYTSGTTGNPKGVVYSHRSTYLHALTACTSNAL
AVSEADRILAIVPMFHANAWGLIYAALMSGADLVLPDRHLQAAPLVSIIEETQPTIAGAVPTIWNDVDRY
LESNPARDISSLRLVACGGSAVPVSLMRAFEDKYNVPIVQAWGMTETSPLATVARAAHGVGETRAWEMRE
SQGRPMCGVEIRLRDDHKKTVPWDGRSAGEIQARGPWITGAYFGDDDPDKFDGGWLRTGDVGRIDPDGYL
TLTDRAKDVIKSGGEWISSVELENTLIGHPAIYEAAVVAVPDDKWQERPLALVVVHRGAEVDIDRLRAFL
LDKVAKWWIPERWSFVSEIPRTSVGKYDKKAIRARHSAGEYQIETS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3133fadD14_1-100% (537)medium chain fatty-acid-CoA ligase FadD14_1
M. marinum MMMAR_4412fadD140.066.10% (534) medium chain fatty-acid-CoA ligase FadD14
M. marinum MMMAR_3151-0.062.38% (537) medium chain fatty-acid-CoA ligase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1087fadD140.066.10% (534) acyl-CoA synthetase
M. gilvum PYR-GCKMflv_4589-0.062.38% (537) acyl-CoA synthetase
M. tuberculosis H37RvRv1058fadD140.066.10% (534) acyl-CoA synthetase
M. leprae Br4923MLBr_02546fadD22e-3727.33% (494) acyl-CoA synthetase
M. abscessus ATCC 19977MAB_2080-0.085.05% (535) acyl-CoA synthetase
M. avium 104MAV_1186-0.065.17% (534) acyl-CoA synthetase
M. smegmatis MC2 155MSMEG_5291-0.065.05% (535) acyl-CoA synthetase
M. thermoresistible (build 8)TH_2961-0.065.98% (535) PUTATIVE AMP-dependent synthetase and ligase
M. ulcerans Agy99MUL_0229fadD140.064.98% (534) acyl-CoA synthetase
M. vanbaalenii PYR-1Mvan_5172-1e-13143.95% (537) AMP-dependent synthetase and ligase

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3133|M.marinum_M               --------------------------MQDVQLTISAIVRHAASIHGNSEV
MAB_2080|M.abscessus_ATCC_1997      --------------------------MQNVPLTVSAIVQHAAAIHGDSEV
Mb1087|M.bovis_AF2122/97            ----------------------MYGTMQDFPLTITAIMRHGCGVHGRRTV
Rv1058|M.tuberculosis_H37Rv         ----------------------MYGTMQDFPLTITAIMRHGCGVHGRRTV
MUL_0229|M.ulcerans_Agy99           ----------------------MYSTMQDFPLTITAIMRHGCGVHGSRQV
MAV_1186|M.avium_104                ----------------------MDGTMQDFPLTITAIMRHGCSVHGARTV
TH_2961|M.thermoresistible__bu      ----------------------MQSTMQPIPLTVAAIMRYAIEVHGDRTV
MSMEG_5291|M.smegmatis_MC2_155      --------------------------MQQWPLTITAILRHACGVNGDQTV
Mflv_4589|M.gilvum_PYR-GCK          --------------------------MQDVALTVPAIVAHAAAVHGDREV
Mvan_5172|M.vanbaalenii_PYR-1       ----------------------MFGLMQDRPLMISSLIEHAAAFHGDTEI
MLBr_02546|M.leprae_Br4923          MTKLRHYLERGAAEVHYLRSIFESGALGFEPPLTYAAMAVAMRKWGDLAM
                                                              :        : :  .    *   :

MMAR_3133|M.marinum_M               ITPDGIG-----------YRSMSYRSVLGRAGRLANALRGLGITADQRVA
MAB_2080|M.abscessus_ATCC_1997      VTPTGNG-----------YRRTPYRIVLARVARLANALRSLGVTADQRVA
Mb1087|M.bovis_AF2122/97            TTATGEG-----------YRHSSYRDVGQRAGQLANALRRLGVTGDQRVA
Rv1058|M.tuberculosis_H37Rv         TTATGEG-----------YRHSSYRDVGQRAGQLANALRRLGVTGDQRVA
MUL_0229|M.ulcerans_Agy99           ITATGDA-----------YRQTTYREVGQRAAQLANALRGLGISGDQRVA
MAV_1186|M.avium_104                TTATGDG-----------YRRTSYRELGDRAAQLANALRGLGVTGDQRVA
TH_2961|M.thermoresistible__bu      TTATGDGG----------YRHATYADLGREAARLANALRRLGITGDERVA
MSMEG_5291|M.smegmatis_MC2_155      TTATGQGG----------FRTTTYREVGERAAQLAHLLREVGITGDERVG
Mflv_4589|M.gilvum_PYR-GCK          LTARGPQQ----------ISGVSYHELGQRAARLANALREIGVRGDERVA
Mvan_5172|M.vanbaalenii_PYR-1       VSRLPEGP----------VRRTTWREINEHSKQVANALAELGIEQGDRVA
MLBr_02546|M.leprae_Br4923          LPAMPARRSPHRAALIDEEGTLTYKELDRAAHALANGLIAKGVRGGDGIA
                                     .                    .:  :      :*: *   *:  .: :.

MMAR_3133|M.marinum_M               TFQWSNQEHLEAYCAVPSMGAVLHTLNIRLAPEQLAYIANHASDQIILVD
MAB_2080|M.abscessus_ATCC_1997      TFQWSNQEHLEAYCAIPSMGAVLHTLNIRLAPEQLAYIANHASDQIVLVD
Mb1087|M.bovis_AF2122/97            TFMWNNTEHLVTYFAVPSMGAVLHTLNIRLFPEQIAYVTNEAEDRVILVD
Rv1058|M.tuberculosis_H37Rv         TFMWNNTEHLVTYFAVPSMGAVLHTLNIRLFPEQIAYVTNEAEDRVILVD
MUL_0229|M.ulcerans_Agy99           TFMWNNAEHLVTYLAVPSMGAVLHTLNIRLFAEQIAYVANEAEDQVVLVD
MAV_1186|M.avium_104                TFMWNNAEHLAAYLAVPSMGAVLHTLNIRLFPEQIAYVANEAGDQVVLVD
TH_2961|M.thermoresistible__bu      TFQWNNQEHLATYVAVPSMGAVLHTLNIRLFPEQLQFIAYEAQDRVVIVD
MSMEG_5291|M.smegmatis_MC2_155      TFMWNNTEHLTAYLAIPAMGAVLHTLNIRLSPEQIGFIAREAEDRVIITD
Mflv_4589|M.gilvum_PYR-GCK          TLQWSNQEHLDCYAAVPSMGAVLHTLNLRLPPEQLTWIANHAEDQVIIVD
Mvan_5172|M.vanbaalenii_PYR-1       TLAWNSDRHLALYFGVSGSGAVMHTVNPRLFPEQIAYIVNHAEDRVLFFD
MLBr_02546|M.leprae_Br4923          ILARNHRWFVIANYGCARVGARIILLNSEFSGPQIKEVSEREGAKVIIYD
                                     :  .   .:    . .  ** :  :* .:   *:  :  .   :::: *

MMAR_3133|M.marinum_M               ASVAPLLASALPAMESVHTVIATGGGDLAP--LQRCGKTVLRYEEILAQQ
MAB_2080|M.abscessus_ATCC_1997      ASVAPLLARALPAMASVHTVIVTGEGDLAP--LQGCGKTVLRYEEVLAGQ
Mb1087|M.bovis_AF2122/97            LSLARLLAPVLPKLDTVHTVIAVGEGDTTP--LREAGKTVLRFAELIDAE
Rv1058|M.tuberculosis_H37Rv         LSLARLLAPVLPKLDTVHTVIAVGEGDTTP--LREAGKTVLRFAELIDAE
MUL_0229|M.ulcerans_Agy99           LSLTNLLAPVLPNLDTVHTVIAVGEGDTAA--LEESGKTVLRYDELLDGQ
MAV_1186|M.avium_104                ASLVKLLAPVLPGLHTVHTVIVVGDGDTEP--LRASGKTVLRYADVIGAE
TH_2961|M.thermoresistible__bu      ASLVPLLAPVLPTMETVHTVIVVGAGDLSP--LQVPGKQVLRYEEILAAE
MSMEG_5291|M.smegmatis_MC2_155      SSLIPLLAPVLPLVDSVHTVIVVGDGDLEP--LRGADRTVLRYDEAMAGR
Mflv_4589|M.gilvum_PYR-GCK          GTVLNLLAGALPSMTSVHTVLVTGTGDLAA--VQGCGKDVLRYDDVVGAQ
Mvan_5172|M.vanbaalenii_PYR-1       ITFAPLVAQLAGELGTVETFVAMTDRDHMPDIPQIPDGRLRCWDDFIGGQ
MLBr_02546|M.leprae_Br4923          DEYTKVVSKAEPALGKLRALGVNPDEEEPP------GSTDETLAELIAR-
                                         :::     : .:.:. .    :  .      .       : :   

MMAR_3133|M.marinum_M               PETFDWPEIDERSAAAMCYTSGTTGNPKGVVYSHRSTYLHALTACTSNAL
MAB_2080|M.abscessus_ATCC_1997      EESFDWPRLDELSAAAMCYTSGTTGDPKGVVYSHRSTYLHSLTACTANAL
Mb1087|M.bovis_AF2122/97            SPDFGWPQIDENSAAAMCYTSGTTGNPKGVVYSHRSSFLHTMAACTTNGI
Rv1058|M.tuberculosis_H37Rv         SPDFGWPQIDENSAAAMCYTSGTTGNPKGVVYSHRSSFLHTMAACTTNGI
MUL_0229|M.ulcerans_Agy99           STEFDWPHIDENSAAAMCYTSGTTGHPKGVVYSHRSSFLHSMATCTANGI
MAV_1186|M.avium_104                PAEFDWPRIDENSAAAMCYTSGTTGNPKGVVYSHRSSFLHTMAACTANGI
TH_2961|M.thermoresistible__bu      SDEFDWPELDENSAAAMCYTSGTTGHPKGVVYSHRSSYLHSTAVCSGNGL
MSMEG_5291|M.smegmatis_MC2_155      PTRFDWPDIDENSAAAMCYTSGTTGNPKGVVYSHRSSYLHSLNTCTANAL
Mflv_4589|M.gilvum_PYR-GCK          SSTFDWPDVDEQSAAAMCYTSGTTGRPKGVVYSHRSTWLHSQAACTSNAL
Mvan_5172|M.vanbaalenii_PYR-1       STAFDWPEFDERSASSLCYTSGTTGNPKGVLYSHRSTMLHTLMIAARDAI
MLBr_02546|M.leprae_Br4923          SSSAPAPKVRKR-ASIIILTSGTTGTPKGANRNTPASLAPLGGILS--KV
                                          * . :  *: :  ****** ***.  .  ::        :   :

MMAR_3133|M.marinum_M               AVSEADRILAIVPMFHANAWGLIYAALMSGADLVLPDRHLQAAPLVSIIE
MAB_2080|M.abscessus_ATCC_1997      SVSEADRVLAIVPMFHANAWGLIYAALMSGADLVLPDRYLQAEPLVSIIE
Mb1087|M.bovis_AF2122/97            GVGSSDKVLPIVPMFHANGWGLPYAALMAGADLVLPDRHLDARSLIHMVE
Rv1058|M.tuberculosis_H37Rv         GVGSSDKVLPIVPMFHANGWGLPYAALMAGADLVLPDRHLDARSLIHMVE
MUL_0229|M.ulcerans_Agy99           GLGSSDRVLPIVPMFHANAWGLPYAALMAGADLVLPDRHLDARSLVHMVE
MAV_1186|M.avium_104                GIGATDSLLPIVPMFHANAWGLPYAALMAGADLVLPDCHLDPRSLVRMVE
TH_2961|M.thermoresistible__bu      GLGFEDRVLPIVPMFHANAWGLPYAALMAGADLVMPDRYLDAKSLVNLIE
MSMEG_5291|M.smegmatis_MC2_155      DVSCGDVVLPIVPMFHANAWGLPYAALMAGAGLVMPDRFLDGASLIELIE
Mflv_4589|M.gilvum_PYR-GCK          GIGHDDTVLAIVPMFHANAWGLPYAAMMAGAQLLLPDRFLQAGPLVEMIE
Mvan_5172|M.vanbaalenii_PYR-1       DIHSGSVILLVVPMFHANAWGTPYTAAMVGAKLVMPGPHLDGQSVYELMK
MLBr_02546|M.leprae_Br4923          PFRAHEVTLLPAPMFHALGYLHATLAMFLGSTLVLR-RRFKPATVLEDIE
                                     .   .  *  .***** .:     * : *: *::    :.  .:   ::

MMAR_3133|M.marinum_M               ETQPTIAGAVPTIWNDVDRYLE-SNPARDISSL--RLVACGGSAVPVSLM
MAB_2080|M.abscessus_ATCC_1997      DTRPTVAGAVPTIWNDVDRYLD-SHPERDISSL--RLVACGGSAVPLSLM
Mb1087|M.bovis_AF2122/97            TLKPTLAGAVPTIWNDVMHYLE-KDPDHDMSSL--RLVACGGSAVPESLM
Rv1058|M.tuberculosis_H37Rv         TLKPTLAGAVPTIWNDVMHYLE-KDPDHDMSSL--RLVACGGSAVPESLM
MUL_0229|M.ulcerans_Agy99           NLRPTRAGAVPTIWNDVMHYLE-KNPGHDVSSL--GLVACGGSAVPESLM
MAV_1186|M.avium_104                DLRPTVTGAVPTIWNAVLHHLE-DDPDHDMSSL--RLVVCGGSAVPVSLM
TH_2961|M.thermoresistible__bu      TQRPTVAGAVPTIWNDVLHHLD-SEPDHDISSL--RLVGCGGSAVPVSLM
MSMEG_5291|M.smegmatis_MC2_155      TQRPTLAGAVPTIWNDVLNCLE-KSPGHDISSL--RLVACGGSAVPLSLM
Mflv_4589|M.gilvum_PYR-GCK          AARPTMAGAVPTIWTDVLHYLR-DNPGHDLSSL--KMVACGGSAVPRSLM
Mvan_5172|M.vanbaalenii_PYR-1       AEGVNQSQGVPTVWMMLFSYLD-EHPEIDAHELGLRVAGTGGAALPLSMI
MLBr_02546|M.leprae_Br4923          KHQATAMVVVPVMLSRILDTLENLETKSDLSSL--RVVFVSGSQLGAELA
                                        .    **.:   :   *    .  *  .*   :.  .*: :  .: 

MMAR_3133|M.marinum_M               RAFEDKYNVPIVQAWGMTETSPLATVARAAH---GVGETRAWEMRESQGR
MAB_2080|M.abscessus_ATCC_1997      RAFEEKYNVPIVQAWGMTETSPLATVARPAH---RADATRRWEMRASQGR
Mb1087|M.bovis_AF2122/97            RTFEDKHDVQIRQLWGMTETSPLATMAWPPP---GTPDDQHWAFRITQGQ
Rv1058|M.tuberculosis_H37Rv         RTFEDKHDVQIRQLWGMTETSPLATMAWPPP---GTPDDQHWAFRITQGQ
MUL_0229|M.ulcerans_Agy99           RTFEEKYGVQIRQLWGMTETSPLATMAWPPP---GTPPDRHWAIRSTQGQ
MAV_1186|M.avium_104                RTFEEKHGVQIRQLWGMTETSPLATMAWPPP---GTPEDQHWAYRGTQGQ
TH_2961|M.thermoresistible__bu      QSFEEKFGVQIRQLWGMTETSPVCTLAWPAP---NTPADRHWEVRGSQGR
MSMEG_5291|M.smegmatis_MC2_155      QAFQERHDVYIQQAWGMTETSPLATVAKPLP---GVTDERHWAMRITQGR
Mflv_4589|M.gilvum_PYR-GCK          TAYDELG-IRIVQAWGMTETSPLAAVALPRD---TDTPERSLYLRGTQGR
Mvan_5172|M.vanbaalenii_PYR-1       ERFHRDFGAESMQGWGMTETSPLCVVGRLLPKHEGLSDAEKNQIRLKQGR
MLBr_02546|M.leprae_Br4923          TRALEELGPVIYNMYGSTEIA-FATIAGPKD---------LQINSATVGP
                                                : :* ** : ...:.                   . * 

MMAR_3133|M.marinum_M               PMCGVEIRLRDDHKKTVPWDGRSAGEIQARGPWITGAYFGDDDPDKFD-G
MAB_2080|M.abscessus_ATCC_1997      PICGVEIRLRDDDGKDVPWDGQSVGEIQARGPWITGSYFGDNDTEKFD-E
Mb1087|M.bovis_AF2122/97            PVCGVETRIVDDDGQVLPNDGNAVGEVEVRGPWIAGSYYGGRDESKFD-S
Rv1058|M.tuberculosis_H37Rv         PVCGVETRIVDDDGQVLPNDGNAVGEVEVRGPWIAGSYYGGRDESKFD-S
MUL_0229|M.ulcerans_Agy99           PVCGVETRIVDDNGEALPNDGQAVGEVEVRGPWITGAYYLGYDQSEFD-S
MAV_1186|M.avium_104                PVCGVQMRIVDDDGRVLPNDGTAVGEVEVRGPWIAGSYYLGRDDSKFD-S
TH_2961|M.thermoresistible__bu      PICGVEARIVDDEGNVLPRDNEAVGELEVRGPWITGSYYHDADPSKFE-N
MSMEG_5291|M.smegmatis_MC2_155      PMCGVEVRIVDDAGNPLPSDGKAVGELEVRGPWITGGYYLGRDAEKFD-S
Mflv_4589|M.gilvum_PYR-GCK          VVAGVQARIVDDSGAEQPWDGKSVGEIQIRGPWITQSYYEYDSPAVSP-D
Mvan_5172|M.vanbaalenii_PYR-1       GVWGVDLKIVDDDGNRLPWDGKAFGEVWVRGPWIASGYFRGEGGEKLDAE
MLBr_02546|M.leprae_Br4923          VVKGVKVKILDDSGKEVPRG--QVGRIFVGNAFPFEGYTGGGGKQIID--
                                     : **. :: **     * .    *.:   ..:   .*    .       

MMAR_3133|M.marinum_M               GWLRTGDVGRIDPDGYLTLTDRAKDVIKSGGEWISSVELENTLIGHPAIY
MAB_2080|M.abscessus_ATCC_1997      GWLRTGDVGKIDAEGYLTLTDRSKDVIKSGGEWISSVELENTLIGHPAVY
Mb1087|M.bovis_AF2122/97            GWLRTGDVGRIDEQGFITLTDRAKDVIKSGGEWISSVELENCLIAHPDVL
Rv1058|M.tuberculosis_H37Rv         GWLRTGDVGRIDEQGFITLTDRAKDVIKSGGEWISSVELENCLIAHPDVL
MUL_0229|M.ulcerans_Agy99           GWLRTGDVGRIDELGFITLTDRAKDVIKSGGEWISSVELENCLIAHPDVV
MAV_1186|M.avium_104                GWLRTGDVGRIDERGFVTLTDRAKDVIKSGGEWISSVELENCLIGHPDVV
TH_2961|M.thermoresistible__bu      GWLRTGDVGRMDAQSYITLTDRAKDVIKSGGEWISSVELENHLIGHPKVR
MSMEG_5291|M.smegmatis_MC2_155      GWLRTGDVGVIDELGYVTLTDRAKDVIKSGGEWISSVELENHLIGHPAVL
Mflv_4589|M.gilvum_PYR-GCK          GWLCTGDVGTISADAFITLTDRAKDVIKSGGEWISSVELENELAAHPAVR
Mvan_5172|M.vanbaalenii_PYR-1       GFFPTGDVATIDPDGYLQLVDRAKDVIKSGGEWVSSIDLENAALGHPAVA
MLBr_02546|M.leprae_Br4923          GLLSSGDVGYFDEHDLLYISGRDDEMIVSGGENVFPAEVEDLISGHPEVV
                                    * : :***. :.    : : .* .::* **** : . ::*:   .** : 

MMAR_3133|M.marinum_M               EAAVVAVPDDKWQERPLALVVVHRGAEVDIDRLRAFLLDKVAKWWIPERW
MAB_2080|M.abscessus_ATCC_1997      EAAVVGVADDKWQERPLALVVVHPGTDVDIDQLRSFLADKVAKWWIPERW
Mb1087|M.bovis_AF2122/97            EAAVVGVPDERWQERPLAVVVVREGATVSAGDLRAFLADKVVRWWLPERW
Rv1058|M.tuberculosis_H37Rv         EAAVVGVPDERWQERPLAVVVVREGATVSAGDLRAFLADKVVRWWLPERW
MUL_0229|M.ulcerans_Agy99           EAAVVGVPDERWQERPLAVVVRREGATVSAAELRKFLADRVVRWWLPERW
MAV_1186|M.avium_104                EAAVVGVPDERWEERPLAVVVVKDGASVDADQLRKFLADKVVRWWLPERW
TH_2961|M.thermoresistible__bu      EAAVVGVPDDRWQERPLAAVVLHEGQQATPEELREFLSDKVVRWWLPERW
MSMEG_5291|M.smegmatis_MC2_155      EAAVVGVPDERWQERPLAVVVLHEGSSADPGELREFLADKVVRWWLPERW
Mflv_4589|M.gilvum_PYR-GCK          TATVIGVPDDKWQERPLAVVVLAADCTATAAELTEFLRARVAKWWLPERW
Mvan_5172|M.vanbaalenii_PYR-1       EAAVIGVPHPKWQERPLLIVVLRKGHHATREDILEYLAGEVVKWWLPDDV
MLBr_02546|M.leprae_Br4923          EATAIGVDDKEWGARLRAFVVKKQDATIDEDAIKAYVRDHLARYKVPREV
                                     *:.:.* . .*  *    **   .       :  ::  .:.:: :*   

MMAR_3133|M.marinum_M               SFVSEIPRTSVGKYDKKAIRARHSAGEYQIETS--
MAB_2080|M.abscessus_ATCC_1997      SFVSDIPRTSVGKYDKKAIRARHSAGEYLIEIETS
Mb1087|M.bovis_AF2122/97            AFVDEIPRTSVGKYDKKAIRSRYAEGAYQITEVHT
Rv1058|M.tuberculosis_H37Rv         AFVDEIPRTSVGKYDKKAIRSRYAEGAYQITEVHT
MUL_0229|M.ulcerans_Agy99           AFADQVPRTSVGKYDKKTIRAGYAESVYQVTDVHN
MAV_1186|M.avium_104                TFVDEIPRTSVGKYDKKAVRSRYADGGYRVIEARD
TH_2961|M.thermoresistible__bu      TFVEEIPRTSVGKYDKKTIRARYADGAYQVTHLGG
MSMEG_5291|M.smegmatis_MC2_155      AFVDQVPRTSVGKYDKKTIRARHAEGAYEVIHL--
Mflv_4589|M.gilvum_PYR-GCK          AFVADVPLTSTGKFDKKKLRSQHADGDLAVETLA-
Mvan_5172|M.vanbaalenii_PYR-1       VFVDELPHTATGKVLKLKLREQYRDHRLSQPE---
MLBr_02546|M.leprae_Br4923          IFLEELPRNPTGKVLKRELRDFEVH----------
                                     *  ::* ...**  *  :*