For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_2828 (lipD)

annotation: lipase LipD
coordinates: 3429357 - 3430640
length: 427

MAQPSVLTTDDGLPSGVAGACDSRFSGVVRAFAGLYPGRKFGGGALSVYIEGRQVVDVWTGWADRNGEVP
WTADTGAMVFSATKGLAATVIHRLVDRGLLDYDAPVADYWPEFGVKGKSAITVSDLLRHRSGLSHLKGVG
KKEILDHLRMEEKLAAAPLDRTHGKMAYHAVTYGWLLSGLARAVTGKGMRDLFREELARPLDTDGLHLGR
PPADAPTTAAQTLLPQSKIPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSMLQDDMPFLDGEIPAVNGVV
TARALAKTYAALANDGVIDGMRLLSSDAVSGLTGKAELWPDLNLGLPFTYHQGYQSSPVPGLLGGYGHIG
LGGTIGWADPESGSAFGYVHNRLLTLLLFDIGSFAGLAPLLSSAVSTARREGPLEVPHFGASYRETGQQP
LAAGETS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_2828lipD-100% (427)lipase LipD
M. marinum MMMAR_2305lipLe-13557.21% (402) esterase LipL
M. marinum MMMAR_3810lipP4e-4033.24% (370) esterase/lipase LipP

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1958lipD0.085.88% (425) lipase LIPD
M. gilvum PYR-GCKMflv_3647-1e-13957.92% (404) beta-lactamase
M. tuberculosis H37RvRv1923lipD0.086.35% (425) lipase LIPD
M. leprae Br4923MLBr_00119lipE1e-2527.82% (363) putative hydrolase
M. abscessus ATCC 19977MAB_1386-1e-10451.26% (396) putative esterase/lipase/beta-lactamase
M. avium 104MAV_3275-1e-13757.07% (410) beta-lactamase
M. smegmatis MC2 155MSMEG_3162-1e-13958.17% (404) beta-lactamase
M. thermoresistible (build 8)TH_3778-1e-13161.31% (367) PUTATIVE beta-lactamase
M. ulcerans Agy99MUL_2951lipD0.099.06% (427) lipase LipD
M. vanbaalenii PYR-1Mvan_2765-1e-14258.91% (404) beta-lactamase

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_2828|M.marinum_M               --------------------MAQP-SVLTTDDGLPSGVAGACDSRFSGVV
MUL_2951|M.ulcerans_Agy99           --------------------MAQP-SVPTTDDGLPSGVAGACDSRFSGVV
Mb1958|M.bovis_AF2122/97            MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVI
Rv1923|M.tuberculosis_H37Rv         MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVI
MSMEG_3162|M.smegmatis_MC2_155      -------------MSGHN-RERDAALPH--------GVQGAADPNFACTA
TH_3778|M.thermoresistible__bu      --------------------------------------------------
Mflv_3647|M.gilvum_PYR-GCK          -------------MTGVNSRERDEALSHGHGGHLPRGVQGAADPNFTCAV
Mvan_2765|M.vanbaalenii_PYR-1       -------------MTGVNNPERDVALSHGHGAALPCGVQGAADPNFTLAV
MAV_3275|M.avium_104                ----------------MDARVDRRAVRVHDDLDAGHRVSGAADSHFGCVV
MAB_1386|M.abscessus_ATCC_1997      ----MAIPLGPNVAATAPVRRDGLYPGDQPGLRLPNGVEGWARPELSAVV
MLBr_00119|M.leprae_Br4923          --------------MTSDGKIRVPTDLDAVTAIGDEDHSDIDSAAVERIW
                                                                                      

MMAR_2828|M.marinum_M               RAFAGLYPGRKFGGGALSVYIEGRQVVDVWTGW--------ADRNGEVPW
MUL_2951|M.ulcerans_Agy99           RAFAGLYPGRKFGGGALSVYTEGRQVVDVWTGW--------ADRNGEVPW
Mb1958|M.bovis_AF2122/97            RAFAGLYPGRKFGGGALSVYIDDRQVVDVWTGW--------SDRQGKVPW
Rv1923|M.tuberculosis_H37Rv         RAFAGLYPGRKFGGGALSVYIDGRQVVDVWTGW--------SDRQGKVPW
MSMEG_3162|M.smegmatis_MC2_155      RAFSRLFPGRRFGGGALAVYQDGQPLVDIWTGY--------SDRAGTEYW
TH_3778|M.thermoresistible__bu      ------------------VYLHGEPVVDVWTGY--------ADRRGTEYW
Mflv_3647|M.gilvum_PYR-GCK          RAFAQMFPHRRFGGGALAVYLNGEPVVDVWTGW--------ADRRGKRRW
Mvan_2765|M.vanbaalenii_PYR-1       RAFAQMFPSRRLGGGALAVYLDGEPVVDVWTGW--------ADRRGTRRW
MAV_3275|M.avium_104                RSFASMFPARRFGGGALAVYVDGQPVVDVWTGW--------ADRAGQRPW
MAB_1386|M.abscessus_ATCC_1997      RTFEWMFTKYRLGGGGLSVYVDGEPALDIWAG---------AAAAGQG-W
MLBr_00119|M.leprae_Br4923          QATRHWYQAGMHPAIQLCIRQHGRVVLNRAIGHGWGNAPTDPHDAEKIPV
                                                      :  ...  ::   *         .        

MMAR_2828|M.marinum_M               TADTGAMVFSATKGLAATVIHRLVDRGLLDYDAPVADYWPEFGVKGKSAI
MUL_2951|M.ulcerans_Agy99           TADTGAMVFSATKGLAATVIHRLVDRGLLDYDAPVADYWPEFGVKGKSAI
Mb1958|M.bovis_AF2122/97            TADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVAEYWPEFGANGKSEV
Rv1923|M.tuberculosis_H37Rv         TADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVAEYWPEFGANGKSEV
MSMEG_3162|M.smegmatis_MC2_155      TADTGAMVFSATKGLASTVIHRLADRGLIDYDTPVSAYWPEFAANGKAHI
TH_3778|M.thermoresistible__bu      TADTGAMVFSATKGMAATVVHRLVDRGLLDYDTPVAEYWPEFGANGKAGI
Mflv_3647|M.gilvum_PYR-GCK          TADTAPMVFSATKGVAATVIHRLADRGLIDYDAPVAEYWREFGVNGKSTI
Mvan_2765|M.vanbaalenii_PYR-1       TADTGPMVFSATKGVTATVIHRLHDRGLVDYDAPVAEYWREFGANGKSAI
MAV_3275|M.avium_104                SENTAPMVFSATKGMAATVIHRLVDRGLIDYEAPVAEYWPAFAANGKANM
MAB_1386|M.abscessus_ATCC_1997      TRDTGALVFSASKGIAATVIHRLVDRGLITYDAPVARYWPEFGANGKSSI
MLBr_00119|M.leprae_Br4923          TTDTPFCAYSAAKAITATVVHMLVERGHFSLDDRVCEYLPTYTSYGKHRT
                                    : :*   .:**:*.:::**:* * :** .  :  *. *   :   **   

MMAR_2828|M.marinum_M               TVSDLLRHRSGLSHLKGVG--KKEILDHLRMEEKLAAAPLD-RTHGKMAY
MUL_2951|M.ulcerans_Agy99           TVSDLLRHRSGLSHLKGVG--KKEILDHLRMEEKLAAAPLD-RTHGKMAY
Mb1958|M.bovis_AF2122/97            TVSDVLRHRSGLAHLKGVD--KDEVMDHLLMEQKLAAAPLN-RQHGKLAY
Rv1923|M.tuberculosis_H37Rv         TVSDVLRHRSGLAHLKGVD--KDEVMDHLLMEQKLAAAPLD-RQHGKLAY
MSMEG_3162|M.smegmatis_MC2_155      TVREVMQHRAGLSQLNGVS--KADMLDHRVMEARIAEASVNRHLYGKSAY
TH_3778|M.thermoresistible__bu      TVRDVLRHRAGLSHLNGVS--KADLLDHRRMEERLAAAPVNRLQYGKPAY
Mflv_3647|M.gilvum_PYR-GCK          TVRELMRHRAGLSQLNGAA--KTDLMDHLVMEERLAAAPAS-WLVGRPAY
Mvan_2765|M.vanbaalenii_PYR-1       TVRDALRHRAGLSQLNGAG--KADLLDHAVMEQRLAAAPRS-WLYGKPAY
MAV_3275|M.avium_104                TVRQVMRHQAGLSGLRGAT--KEELLDHLVMEERLAAAAPG-RLLGKSAY
MAB_1386|M.abscessus_ATCC_1997      TVRQVLDHRAGLSRLEGIAYHAEEIVDHELMERRLAAAPVD-KFYGKRAY
MLBr_00119|M.leprae_Br4923          TIRHVLTHSAGVPFPTGPRPDVTRADDHAYAQQKLSELRPFYRPGLVHIY
                                    *: . : * :*:.   *         **   : :::             *

MMAR_2828|M.marinum_M               HAVTYGWLLSGLARAVTGKGMRDLFREELARPLDTDGLHLGRPPADAPTT
MUL_2951|M.ulcerans_Agy99           HAVTYGWLLSGLARAVTGKGMRDLFREELARPLDTDGLHLGRPPGDAPTT
Mb1958|M.bovis_AF2122/97            HAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTK
Rv1923|M.tuberculosis_H37Rv         HAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTK
MSMEG_3162|M.smegmatis_MC2_155      HALTYGWLMSGLVRAVTGQGMRELFRTELAEPLNTDGIHLGRPPVGAPTR
TH_3778|M.thermoresistible__bu      HALTYGWLLSGLVRAITGCGMRELVRTELAEPLNTDGLHLGRPPAGAPTK
Mflv_3647|M.gilvum_PYR-GCK          HAFTFGWLLSGLARSVTGTGMRELIRTEVAAPLNTDGIHLGRPPVQAPTQ
Mvan_2765|M.vanbaalenii_PYR-1       HALTFGWLLSGLARSITGKGMRELIRTEVAAPLNTDGLHLGRPPVQAPTE
MAV_3275|M.avium_104                HALTFGWLMSGLGRAVTGKGMRTLIREELAEPLGTDGLYLGRPPAGAPTR
MAB_1386|M.abscessus_ATCC_1997      HALTFGWLLAGLARSVTGKDMRELFRTEIADPLGVDGIHLGRPPRTASTK
MLBr_00119|M.leprae_Br4923          HALTWGPLMREIIWTATGKEIRDILAAEILDPLGFRWTNFGVAEEDVPLV
                                    **.*:* *:  :  : **  :* :.  *:  **.     :* .    .  

MMAR_2828|M.marinum_M               AAQTLLPQSKIPTP-----LLDFIAPKVAGLS-FSGLLGAVYFPGILSML
MUL_2951|M.ulcerans_Agy99           AAQTLLPQSKIPTP-----LLDFIAPKVAGLS-FSGLLGAVYFPGILSML
Mb1958|M.bovis_AF2122/97            AAQTLLPQAKVPTP-----LLDFIAPKVAGLS-FSGLLGAVYFPGILSLL
Rv1923|M.tuberculosis_H37Rv         AAQTLLPQAKVPTP-----LLDFIAPKVAGLS-FSGLLGAVYFPGILSLL
MSMEG_3162|M.smegmatis_MC2_155      AAQILGPQRTWPNH-----VFDFLAPRFAALE-FSGFFGSTYCPGVMSLV
TH_3778|M.thermoresistible__bu      AAQILAPQGALDIP-----VVGAVVPRLAASQ-ASAMFGAMYFPGMFSVV
Mflv_3647|M.gilvum_PYR-GCK          PARIIGPQTRLQNP-----IFNAVAPHIAALP-FSAGFGAMYFPGVKSFV
Mvan_2765|M.vanbaalenii_PYR-1       AAQIIGPQTRLQNP-----VFNLVAPRIAALP-FSAGFGAIYLPGVKALV
MAV_3275|M.avium_104                VAEIVAPQNLVGSS-----IVNYVS-RKVANQ-LSGGFRAMYFPGMIAAV
MAB_1386|M.abscessus_ATCC_1997      AASMYPFLDSMANKPAVGRLLPTVIRAIDRLPGFEGAIGTMYGPGMERIL
MLBr_00119|M.leprae_Br4923          ALSHATGRP--------------------LPPIIAAIFRKAIGGTVHEVI
                                                                       . :       :   :

MMAR_2828|M.marinum_M               QDD----MPFLDGEIPAVNGVVTARALAKTYAALANDGVIDGMRLLSSDA
MUL_2951|M.ulcerans_Agy99           QDD----MPFLDGEIPAVNGVVTARALAKTYAALANDGVIDGMRLLSSDA
Mb1958|M.bovis_AF2122/97            QDD----MPFLDGEVPAVNGVVTARALAKTYGALANDGVIDGTRLLSSQA
Rv1923|M.tuberculosis_H37Rv         QDD----MPFLDGEVPAVNGVVTARALAKTYGALANDGVIDGTRLLSSQA
MSMEG_3162|M.smegmatis_MC2_155      QGD----TPFLDAEIPAANGVATARGLAKVYGAIANGGRFAGEEFLSAAT
TH_3778|M.thermoresistible__bu      QGD----IPFLDSEIPAANAVATARGLAKMYGAIANGGRIDDVRFLSPEI
Mflv_3647|M.gilvum_PYR-GCK          QGD----TPLLDGEIPAANGVATARALARMYGAIANEGRIDGLQYLSRET
Mvan_2765|M.vanbaalenii_PYR-1       QGD----TPLLDGEIPAANGVATARALARMYGAIANGGRIDGTQYLSGET
MAV_3275|M.avium_104                QGD----TPLLDAEIPAANGVATARGLARMYGAIANGGEVDGIRFLSRDL
MAB_1386|M.abscessus_ATCC_1997      ADDGTLNSALYDMQAPAANAVATAPALAKMYAALAGDGSVDGRELLSPET
MLBr_00119|M.leprae_Br4923          PYTN--TPPFLTTIVPSSNTVSTANELSRFAEIWLRGGELDGIRVLRSET
                                            .:     *: * * **  *::        * . . . *    

MMAR_2828|M.marinum_M               VSGLTGKAE-LWPDLNLGLP-------FTYHQGYQSSPVPGLLGGYGHIG
MUL_2951|M.ulcerans_Agy99           VSGLTGKAE-LWPDLNLGLP-------FTYHQGYQSPPVPGLLGGYGHIG
Mb1958|M.bovis_AF2122/97            VRGLTGKSE-LWPDLNLGLP-------FTYHQGYQSSPVPGLLEGYGHIG
Rv1923|M.tuberculosis_H37Rv         VRGLTGKSE-LWPDLNLGLP-------FTYHQGYQSSPVPGLLEGYGHIG
MSMEG_3162|M.smegmatis_MC2_155      VAGLSGRRS-LSPDRNIGVP-------LAFHLGYHSVPF-GVMAGFGHVG
TH_3778|M.thermoresistible__bu      VAGLAGRRN-LRPDRNLGVP-------MAFHLGYHGVPF-GIMPGFGHVG
Mflv_3647|M.gilvum_PYR-GCK          TAVLAGRRS-LRLDHSMVMP-------LSFHLGYHGLPIPGLLPGFGHVG
Mvan_2765|M.vanbaalenii_PYR-1       AAALIGRPS-LRPDHSMVMP-------LSFHLGYHGLPFPGVLPGFGHVG
MAV_3275|M.avium_104                VAGLTGERS-LRPDRNLYVP-------LAFHLGYHSVPIGGVMPGFGHVG
MAB_1386|M.abscessus_ATCC_1997      VAGLARKTN-LTIDRTIVFP-------MGMHLGYMSLPMNGFRGGFGHIG
MLBr_00119|M.leprae_Br4923          LLGAVAECRRLRPDFVVGLMPARWGTGFILGTNKFGPFGRNAPAAFGHLG
                                          .   *  *  : .        :    .  .    .   .:**:*

MMAR_2828|M.marinum_M               LGGTIGWADPESGSAFGYVHNRLLT-LLLFDIGSFAGLAPLLSSAVSTAR
MUL_2951|M.ulcerans_Agy99           LGGTIGWADPESGSAFGYVHNRLLT-LLLFDIGSFAGLAPLLSSAVSTAR
Mb1958|M.bovis_AF2122/97            LGGTIGWADPETGSAFGYVHNRLLT-LLLFDIGSFAGLAALLNSAVVAAR
Rv1923|M.tuberculosis_H37Rv         LGGTIGWADPETGSAFGYVHNRLLT-LLLFDIGSFAGLAALLNSAVVAAR
MSMEG_3162|M.smegmatis_MC2_155      LGGSVGWADPASGLAVGFVHNRLLTPMVF-DMGAFVGLHAVIRNDLARAR
TH_3778|M.thermoresistible__bu      LGGSYGWAEPETGLAIGYVHNRLLTPMLI-DQAAFVGLNALIRRDAAAAR
Mflv_3647|M.gilvum_PYR-GCK          LGGSLGWADPETGLAFGFVHNRLLTPMVVSDQAGFVATAALLRRGASQAR
Mvan_2765|M.vanbaalenii_PYR-1       LGGSLGWADPRSGLSFGYVHNRLLTPLVLSDQAGFVATAALIRRGAAAAR
MAV_3275|M.avium_104                MGGSLGWADPASGVAFSLVHNRLLTPLVMTDHAAFVGIYALIRRAAEQVR
MAB_1386|M.abscessus_ATCC_1997      LGGSMGWADPKRKIAVGFAHNRLPLTMAL-DQISFAFLWPQIVKAVG---
MLBr_00119|M.leprae_Br4923          LVNIAIWADPQRSMAAGLISSGKPG--QDPNAGRYGALMNTITAEIPVH-
                                    : .   **:*    : .   .         :   :      :        

MMAR_2828|M.marinum_M               REGPLEVPHFG-ASYRETGQQPLAAGETS
MUL_2951|M.ulcerans_Agy99           REGPLEVPHFG-ASYRETGQQPLAAGETS
Mb1958|M.bovis_AF2122/97            RDDPLEVPHFG-APYSEPRHEQAASGA--
Rv1923|M.tuberculosis_H37Rv         RDDPLEVPHFG-APYSEPRHEQAASGA--
MSMEG_3162|M.smegmatis_MC2_155      RRGFEPVPDLGAAPYELSK---PVAG---
TH_3778|M.thermoresistible__bu      RRGYRPVGDLG-APFDMRK---RVAG---
Mflv_3647|M.gilvum_PYR-GCK          KNGYRRVREYG-SPFSDVA---ATAV---
Mvan_2765|M.vanbaalenii_PYR-1       RNGYRPVREYG-APFTDLT---ATAV---
MAV_3275|M.avium_104                KHGFRPVTEFG-APFREPG---AVAG---
MAB_1386|M.abscessus_ATCC_1997      -----------------------------
MLBr_00119|M.leprae_Br4923          -----------------------------