For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GYDLSLVRAPLGPAQTVLEAARKLGLLIVHTREGHRPDLSDLPANKRWRSARIGAEIGVAGPCGRVLTRG EPGWEIIPEMEPLPGEMVVDKLGKGSFYATDLELILTTRRITHLIFTGIATDVCVHTTMREANDRGYECL LLSDCTGATDYANHLAALKMITMQGGVFGAHATNGALLEAFNKVRDRRG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_2657 | - | - | 100% (190) | isochorismatase family protein |
| M. marinum M | MMAR_3790 | - | 2e-09 | 29.08% (141) | isochorismatase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4334 | - | 1e-09 | 26.22% (164) | isochorismatase hydrolase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3431c | - | 8e-80 | 75.14% (181) | isochorismatase hydrolase |
| M. avium 104 | MAV_1602 | - | 2e-09 | 27.74% (155) | isochorismatase family protein |
| M. smegmatis MC2 155 | MSMEG_2243 | - | 4e-10 | 28.22% (163) | isochorismatase family protein |
| M. thermoresistible (build 8) | TH_0553 | - | 2e-11 | 29.17% (168) | isochorismatase family protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3053 | - | 9e-44 | 47.03% (185) | isochorismatase hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_1602|M.avium_104 ----------MTDLAELVAPAHTAVITQEVQGAVVGPDAGLGALAAEARR
MSMEG_2243|M.smegmatis_MC2_155 -------------MRELVTPGRTAVVTQECQGAVIGPDAGLRALADEAQR
Mflv_4334|M.gilvum_PYR-GCK ---------MRIPLAELVAPGHTAVVTQECQEAVVGTNAGLAALADAARG
TH_0553|M.thermoresistible__bu ----MFILMPQPRLSDLIDPRSTALVTQECQGGVIGPQAGLPHLAAEAQR
MMAR_2657|M.marinum_M -------------------------------------------MGYDLSL
MAB_3431c|M.abscessus_ATCC_199 MTGQVDAQPYPWPFDGPVDPGRTAVLCIDWQVDFCGRGGYVDTMGYDLSL
Mvan_3053|M.vanbaalenii_PYR-1 MNHTVDVPAEPSSFP--LVAGRTALIVIDMQRDFLLPGGFGESLGNDVGR
:.
MAV_1602|M.avium_104 --VALPNIVRLLPPARAAGVRIVHCLVQRRPDG---------LGSNHNAK
MSMEG_2243|M.smegmatis_MC2_155 --VALPNIKRLLPAARAASVHVVHCLVQRRPDG---------LGSNRNAK
Mflv_4334|M.gilvum_PYR-GCK --EALPNISRLLPVARRAGVDVVHCLVQRRADG---------RGANHNAK
TH_0553|M.thermoresistible__bu --EAIPNIGKLLDAARSAGVTVVHCLIQRRPDG---------RGSNTNAR
MMAR_2657|M.marinum_M VRAPLGPAQTVLEAARKLGLLIVHTREGHRPDLSDLPANKRWRSARIGAE
MAB_3431c|M.abscessus_ATCC_199 TRAGLEPTARVLAAARAVGMTIIHTREGHRPDLSDLPANKRWRSARIGAE
Mvan_3053|M.vanbaalenii_PYR-1 LLKVVPPLASLIAAARAAGVMVVHTREGHQPDLSDCPPAKLNRGTPS-KR
: :: ** .: ::* ::.* .: .
MAV_1602|M.avium_104 IFALGRRSGQGRVDISPGTPGATLLPELGPAPSDLVLSRWHGVGPMGGTD
MSMEG_2243|M.smegmatis_MC2_155 IFAIGRND----VAIAPGTPGAALLPELGPEAGDLVLTRWHGLGPMGGTD
Mflv_4334|M.gilvum_PYR-GCK LFTVGASG----VDITPDSPGTQLVPEIDVQPSDLVLRRWHGLGPMGGTD
TH_0553|M.thermoresistible__bu LFAAATSFD---ADLTPGTPGASVLPEFGPEPEDLVLTRMHGVGPMTGTD
MMAR_2657|M.marinum_M IGVAGPCG----RVLTRGEPGWEIIPEMEPLPGEMVVDKL-GKGSFYATD
MAB_3431c|M.abscessus_ATCC_199 IGVAGPCG----RILVKGEPGWEIVPEVAPLPGEPIIDKP-GKGAFYATD
Mvan_3053|M.vanbaalenii_PYR-1 IGDPGRYG----RILIRGEYGHDIIDELAPIDGEIVIDKP-GKGAFYATS
: . : . * :: *. : :: : * *.: .*.
MAV_1602|M.avium_104 LDAVLRNLGVSTLVVVGVSLNIAIPNVVMDAVNAAYRVVVPRDAVAGVPA
MSMEG_2243|M.smegmatis_MC2_155 LDAVLRNLGVTTIVAVGVSVNVAITNLVMDAVNAGYHVVLPRDAVAGVPT
Mflv_4334|M.gilvum_PYR-GCK LDAILRNLGVTTIVAVGVSVNVAILNLVMDAVNAGYRVVLPRDGVAGIPA
TH_0553|M.thermoresistible__bu LDSVLRNLGIETIVGVGVSVNIAIPNFVMDAVNRGYRFVLPRDAVAGYPR
MMAR_2657|M.marinum_M LELILTTRRITHLIFTGIATDVCVHTTMREANDRGYECLLLSDCTGATDY
MAB_3431c|M.abscessus_ATCC_199 LDLVLRTRGIRYIVLTGITTDVCVHTTMREANDRGFECLILSDCTGATDA
Mvan_3053|M.vanbaalenii_PYR-1 LSDVLTEAGITQLLITGVTTEVCVHTTTREANDRGYQCLVVSDCVGSYFP
*. :* : :: .*:: ::.: . :* : .:. :: * ...
MAV_1602|M.avium_104 EYGEA---VIANTLSLLATITTTDELLRAWSRP----------
MSMEG_2243|M.smegmatis_MC2_155 DYADA---VIDNTLSLLATVTSTDQLLQIWQP-----------
Mflv_4334|M.gilvum_PYR-GCK EYATA---VIDNTLSLLATLTITDDLISAWAATC---------
TH_0553|M.thermoresistible__bu EYAEA---VIDNSLALLATVTSTDEVTGVWNGATDRRLDVDTR
MMAR_2657|M.marinum_M ANHLAALKMITMQGGVFGAHATNGALLEAFNKVRDRRG-----
MAB_3431c|M.abscessus_ATCC_199 GNHAAALKMVTMQGGVFGAVADSNQLLGAL-------------
Mvan_3053|M.vanbaalenii_PYR-1 EFQRVGLEMIKAQGGIFGWVADTSSVIPALARLSSIPA-----
. :: .::. : .. :