For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_2483 (-)

annotation: antibiotic resistance ABC transporter, efflux protein
coordinates: 3022739 - 3022981
length: 80

LAGLPQLLLAGSIVAAAVVPTLLERVCNAMSASYALEALQQFGAHPELTYIALRDIVVVVVFAVASLCLA
AAALRRRTP*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_2483--100% (80)antibiotic resistance ABC transporter, efflux protein
M. marinum MMMAR_2485-2e-2983.54% (79) antibiotic resistance ABC transporter, efflux protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1712c-9e-2571.79% (78) integral membrane protein ABC transporter
M. gilvum PYR-GCK-----
M. tuberculosis H37RvRv1686c-1e-2471.79% (78) integral membrane protein ABC transporter
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. avium 104MAV_3086-6e-2467.09% (79) ABC transporter efflux protein, DrrB family protein
M. smegmatis MC2 155MSMEG_3763-5e-2166.67% (75) ABC transporter efflux protein, DrrB family protein
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_1665-1e-2983.54% (79) antibiotic resistance ABC transporter, efflux protein
M. vanbaalenii PYR-1Mvan_3297-5e-2062.67% (75) multidrug ABC transporter inner membrane protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_3763|M.smegmatis_MC2_155      MSVRRPGSRAYLATTTRILRQLAGDHRSVAMILLVPSLIITLIYFMFDDV
Mvan_3297|M.vanbaalenii_PYR-1       MTPR-----AYIATTARILRQLAGDHRSVAMILVVPTLVITLMYFMFAEV
MAV_3086|M.avium_104                ----------------------------MAMILLVPVLVITLMYFMFENA
Mb1712c|M.bovis_AF2122/97           ------------------------------MILLVPILIITLMYFMFENF
Rv1686c|M.tuberculosis_H37Rv        ------------------------------MILLVPILIITLMYFMFENV
MUL_1665|M.ulcerans_Agy99           ------------------------------MILLVPVLVITLMYFMFENA
MMAR_2483|M.marinum_M               --------------------------------------------------
                                                                                      

MSMEG_3763|M.smegmatis_MC2_155      PQRPGAPSPFNTACLIMLGVFPLIVMFLITSITMQRERVSGTLERILTTP
Mvan_3297|M.vanbaalenii_PYR-1       PQRPGAPSPFNNACLIMLGVFPLIVMFLITSITMQRERVSGTLERILTTP
MAV_3086|M.avium_104                PHRPGGPTPFNNACLVLLGLFPLFVMFIITAITMQRERASGTLERILTTP
Mb1712c|M.bovis_AF2122/97           PHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTP
Rv1686c|M.tuberculosis_H37Rv        PHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTP
MUL_1665|M.ulcerans_Agy99           PHRPGTQTPFNNACLILLGLFPLVVIFIITSFTMQRERASGTSERVLTTP
MMAR_2483|M.marinum_M               --------------------------------------------------
                                                                                      

MSMEG_3763|M.smegmatis_MC2_155      LRRFDLLAAYGTAFSLAAAAQATLACTVAFWLLGFHTEGSPLLVVGIAIV
Mvan_3297|M.vanbaalenii_PYR-1       LRRLDLLAAYGTAFALAAAAQAVFACAVSFWLLGLDTAGSALWVFAIAIV
MAV_3086|M.avium_104                LRRLDLLIAYGTAFSLAAAAQAILACIVSFWLLGFDTAGSPVWVFVIAIV
Mb1712c|M.bovis_AF2122/97           LRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV
Rv1686c|M.tuberculosis_H37Rv        LRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV
MUL_1665|M.ulcerans_Agy99           LRRLDMLAGYGTAFSLAAAAQATVACIVSFWLLGFDTAGSPVWVFVIAVV
MMAR_2483|M.marinum_M               --------------------------------------------------
                                                                                      

MSMEG_3763|M.smegmatis_MC2_155      NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIIVPRAALPEWL
Mvan_3297|M.vanbaalenii_PYR-1       NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIVVPRAQLPDWL
MAV_3086|M.avium_104                NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPHWL
Mb1712c|M.bovis_AF2122/97           NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWL
Rv1686c|M.tuberculosis_H37Rv        NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWL
MUL_1665|M.ulcerans_Agy99           NAILGVGLGLLFSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRAVMPTWL
MMAR_2483|M.marinum_M               --------------------------MLAGLPQLLLAGSIVAAAVVPTLL
                                                               *.  *****.* :*. * :*  *

MSMEG_3763|M.smegmatis_MC2_155      QWVSNALPASYALEALQEVGAYPDLTATAVRDISVVVGFAVLALCLAAAT
Mvan_3297|M.vanbaalenii_PYR-1       QWISNALPASYALEALQEVNAHPELTSVAVRDIAVVLGFTVISLTLAAAT
MAV_3086|M.avium_104                QWISNVLPASYALEALQQVGTHPELTFIAVRDIVVVLGFALAALCLAAAT
Mb1712c|M.bovis_AF2122/97           EWISNVMPASYALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVT
Rv1686c|M.tuberculosis_H37Rv        EWISNVMPASYALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVT
MUL_1665|M.ulcerans_Agy99           EWVSNAMPASYALEALQQVGAHPELTYIALRDIVVVVVFAVASLCLAAAT
MMAR_2483|M.marinum_M               ERVCNAMSASYALEALQQFGAHPELTYIALRDIVVVVVFAVASLCLAAAA
                                    : :.*.:.*********:..::*:**  *:**: **: *:: :* ***.:

MSMEG_3763|M.smegmatis_MC2_155      LRRRTP
Mvan_3297|M.vanbaalenii_PYR-1       LRRRTP
MAV_3086|M.avium_104                LRRRTP
Mb1712c|M.bovis_AF2122/97           LRRRTS
Rv1686c|M.tuberculosis_H37Rv        LRRRTS
MUL_1665|M.ulcerans_Agy99           LRRRTP
MMAR_2483|M.marinum_M               LRRRTP
                                    *****.