For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LAGLPQLLLAGSIVAAAVVPTLLERVCNAMSASYALEALQQFGAHPELTYIALRDIVVVVVFAVASLCLA AAALRRRTP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2483 | - | - | 100% (80) | antibiotic resistance ABC transporter, efflux protein |
M. marinum M | MMAR_2485 | - | 2e-29 | 83.54% (79) | antibiotic resistance ABC transporter, efflux protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1712c | - | 9e-25 | 71.79% (78) | integral membrane protein ABC transporter |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1686c | - | 1e-24 | 71.79% (78) | integral membrane protein ABC transporter |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_3086 | - | 6e-24 | 67.09% (79) | ABC transporter efflux protein, DrrB family protein |
M. smegmatis MC2 155 | MSMEG_3763 | - | 5e-21 | 66.67% (75) | ABC transporter efflux protein, DrrB family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1665 | - | 1e-29 | 83.54% (79) | antibiotic resistance ABC transporter, efflux protein |
M. vanbaalenii PYR-1 | Mvan_3297 | - | 5e-20 | 62.67% (75) | multidrug ABC transporter inner membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3763|M.smegmatis_MC2_155 MSVRRPGSRAYLATTTRILRQLAGDHRSVAMILLVPSLIITLIYFMFDDV Mvan_3297|M.vanbaalenii_PYR-1 MTPR-----AYIATTARILRQLAGDHRSVAMILVVPTLVITLMYFMFAEV MAV_3086|M.avium_104 ----------------------------MAMILLVPVLVITLMYFMFENA Mb1712c|M.bovis_AF2122/97 ------------------------------MILLVPILIITLMYFMFENF Rv1686c|M.tuberculosis_H37Rv ------------------------------MILLVPILIITLMYFMFENV MUL_1665|M.ulcerans_Agy99 ------------------------------MILLVPVLVITLMYFMFENA MMAR_2483|M.marinum_M -------------------------------------------------- MSMEG_3763|M.smegmatis_MC2_155 PQRPGAPSPFNTACLIMLGVFPLIVMFLITSITMQRERVSGTLERILTTP Mvan_3297|M.vanbaalenii_PYR-1 PQRPGAPSPFNNACLIMLGVFPLIVMFLITSITMQRERVSGTLERILTTP MAV_3086|M.avium_104 PHRPGGPTPFNNACLVLLGLFPLFVMFIITAITMQRERASGTLERILTTP Mb1712c|M.bovis_AF2122/97 PHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTP Rv1686c|M.tuberculosis_H37Rv PHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTP MUL_1665|M.ulcerans_Agy99 PHRPGTQTPFNNACLILLGLFPLVVIFIITSFTMQRERASGTSERVLTTP MMAR_2483|M.marinum_M -------------------------------------------------- MSMEG_3763|M.smegmatis_MC2_155 LRRFDLLAAYGTAFSLAAAAQATLACTVAFWLLGFHTEGSPLLVVGIAIV Mvan_3297|M.vanbaalenii_PYR-1 LRRLDLLAAYGTAFALAAAAQAVFACAVSFWLLGLDTAGSALWVFAIAIV MAV_3086|M.avium_104 LRRLDLLIAYGTAFSLAAAAQAILACIVSFWLLGFDTAGSPVWVFVIAIV Mb1712c|M.bovis_AF2122/97 LRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV Rv1686c|M.tuberculosis_H37Rv LRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV MUL_1665|M.ulcerans_Agy99 LRRLDMLAGYGTAFSLAAAAQATVACIVSFWLLGFDTAGSPVWVFVIAVV MMAR_2483|M.marinum_M -------------------------------------------------- MSMEG_3763|M.smegmatis_MC2_155 NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIIVPRAALPEWL Mvan_3297|M.vanbaalenii_PYR-1 NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIVVPRAQLPDWL MAV_3086|M.avium_104 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPHWL Mb1712c|M.bovis_AF2122/97 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWL Rv1686c|M.tuberculosis_H37Rv NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWL MUL_1665|M.ulcerans_Agy99 NAILGVGLGLLFSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRAVMPTWL MMAR_2483|M.marinum_M --------------------------MLAGLPQLLLAGSIVAAAVVPTLL *. *****.* :*. * :* * MSMEG_3763|M.smegmatis_MC2_155 QWVSNALPASYALEALQEVGAYPDLTATAVRDISVVVGFAVLALCLAAAT Mvan_3297|M.vanbaalenii_PYR-1 QWISNALPASYALEALQEVNAHPELTSVAVRDIAVVLGFTVISLTLAAAT MAV_3086|M.avium_104 QWISNVLPASYALEALQQVGTHPELTFIAVRDIVVVLGFALAALCLAAAT Mb1712c|M.bovis_AF2122/97 EWISNVMPASYALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVT Rv1686c|M.tuberculosis_H37Rv EWISNVMPASYALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVT MUL_1665|M.ulcerans_Agy99 EWVSNAMPASYALEALQQVGAHPELTYIALRDIVVVVVFAVASLCLAAAT MMAR_2483|M.marinum_M ERVCNAMSASYALEALQQFGAHPELTYIALRDIVVVVVFAVASLCLAAAA : :.*.:.*********:..::*:** *:**: **: *:: :* ***.: MSMEG_3763|M.smegmatis_MC2_155 LRRRTP Mvan_3297|M.vanbaalenii_PYR-1 LRRRTP MAV_3086|M.avium_104 LRRRTP Mb1712c|M.bovis_AF2122/97 LRRRTS Rv1686c|M.tuberculosis_H37Rv LRRRTS MUL_1665|M.ulcerans_Agy99 LRRRTP MMAR_2483|M.marinum_M LRRRTP *****.