For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTENATAAEESLDMITDALLTASRLLVGISAHSIAQVDENITIPQFRTLVILSNRGPVNLATLANLLGV QPSATGRMVDRLVSAGMIDRQPHPTSRRELLAVLTKRGRDLVRRVTAHRRDEIARIVEQMPPAERQGLVR ALTAFTAAGGEPDANVEMDL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2213 | - | - | 100% (160) | transcriptional regulatory protein |
M. marinum M | MMAR_0059 | - | 7e-10 | 31.93% (119) | transcriptional regulatory protein |
M. marinum M | MMAR_1822 | - | 1e-07 | 33.66% (101) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1439 | - | 9e-69 | 83.02% (159) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_0628 | - | 2e-09 | 25.16% (155) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1404 | - | 1e-68 | 83.02% (159) | transcriptional regulatory protein |
M. leprae Br4923 | MLBr_00550 | - | 2e-66 | 79.75% (158) | putative marR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_1021 | - | 5e-52 | 69.80% (149) | MarR family transcriptional regulator |
M. avium 104 | MAV_3374 | - | 8e-65 | 79.87% (154) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_5566 | - | 3e-17 | 37.07% (116) | transcriptional regulator |
M. thermoresistible (build 8) | TH_3245 | - | 4e-09 | 29.81% (104) | PUTATIVE - |
M. ulcerans Agy99 | MUL_1800 | - | 6e-84 | 99.38% (160) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_0537 | - | 2e-09 | 25.16% (155) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2213|M.marinum_M -------------------------------------------------- MUL_1800|M.ulcerans_Agy99 MARTAIANKAISEYLRPRGSLGSGTEANTSRNSDPMSSLRSPALQWSNTS Mb1439|M.bovis_AF2122/97 -------------------------------------------------- Rv1404|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00550|M.leprae_Br4923 -------------------------------------------------- MAV_3374|M.avium_104 -------------------------------------------------- MAB_1021|M.abscessus_ATCC_1997 -------------------------------------------------- Mflv_0628|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0537|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5566|M.smegmatis_MC2_155 -------------------------------------------------- TH_3245|M.thermoresistible__bu -------------------------------------------------- MMAR_2213|M.marinum_M -------------------------------------------------- MUL_1800|M.ulcerans_Agy99 GTDDTGNTETVGTGNSRPTTNSNQLDRSPDSPCLHCGPNSAAPKIINPAH Mb1439|M.bovis_AF2122/97 -------------------------------------------------- Rv1404|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00550|M.leprae_Br4923 -------------------------------------------------- MAV_3374|M.avium_104 -------------------------------------------------- MAB_1021|M.abscessus_ATCC_1997 -------------------------------------------------- Mflv_0628|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0537|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5566|M.smegmatis_MC2_155 -------------------------------------------------- TH_3245|M.thermoresistible__bu -------------------------------------------------- MMAR_2213|M.marinum_M ----------------MSTENATAAEES-LDMITDALLTASRLLVGISAH MUL_1800|M.ulcerans_Agy99 KPANQQRRSPGGRGPLMSTENATAAEES-LDMITDALPTASRLLVGISAH Mb1439|M.bovis_AF2122/97 ---------------MMPTEYPATAEES-VDVITDALLTASRLLVAISAH Rv1404|M.tuberculosis_H37Rv ---------------MMPTEYPATAEES-VDVITDALLTASRLLVAISAH MLBr_00550|M.leprae_Br4923 ----------------MVTDDATVADES-LDDITDALLTASRLLVAVSAH MAV_3374|M.avium_104 ----------------MAADH-TTVDES-LDAITDALLTASRLLMAISAR MAB_1021|M.abscessus_ATCC_1997 ----------------MTVDD-VDLDES-LDALADSLLVASRLLLAISAR Mflv_0628|M.gilvum_PYR-GCK ---------MTTEKLTMAQQVAAKTREAGPDHDPSSLALPLALYRAVTAF Mvan_0537|M.vanbaalenii_PYR-1 ---------MTTEKLTMAQQVAAKTREAGPDHDPSSLALPLALYRAVTAF MSMEG_5566|M.smegmatis_MC2_155 ---------------------------------MVAVQLVTSDLVGVALR TH_3245|M.thermoresistible__bu ----------------------MEERSSGIAALHQRIPFLLSQLGAHLAE : . MMAR_2213|M.marinum_M SIAQVDEN----ITIPQFRTLVILS-NRGPVNLATLANLLGVQPSATGRM MUL_1800|M.ulcerans_Agy99 SIAQVDEN----ITIPQFRTLVILS-NRGPVNLATLANLLGVQPSATGRM Mb1439|M.bovis_AF2122/97 SIAQVDEN----ITIPQFRTLVILS-NHGPINLATLATLLGVQPSATGRM Rv1404|M.tuberculosis_H37Rv SIAQVDEN----ITIPQFRTLVILS-NHGPINLATLATLLGVQPSATGRM MLBr_00550|M.leprae_Br4923 SIGQVDET----ITFPQFRTLVILS-NRGPVNLATLAGLLGVQPSATGRM MAV_3374|M.avium_104 SVGQVDET----ITIPQFRTLVILS-NRGPVNLATLAGLLGVQPSATGRM MAB_1021|M.abscessus_ATCC_1997 SIAQVDET----ITFPQFRTLVILF-NEGPINLATLAQSLGVQPSTTGRM Mflv_0628|M.gilvum_PYR-GCK GRVAVDELTPVDLSMSQFNVLTVLKRADGPITMGALADSISVRQASLTSV Mvan_0537|M.vanbaalenii_PYR-1 GRVAVDELTPVDLSMSQFNVLTVLKRADGPITMGALADSISVRQASLTSV MSMEG_5566|M.smegmatis_MC2_155 SVDGLEVS------LPQFRLLRVLD-EVGEAGATRCAEMLGIGGSSITRL TH_3245|M.thermoresistible__bu DFVRRLEPFG--IEPRIYAVLTALS-EVDGQSQRELSAQLGIHRNAMVAV . : * * . : :.: : : MMAR_2213|M.marinum_M VDRLVSAGMIDRQPHPTSRRELLAVLTKRGRDLVRRVTAHRRDEIARIVE MUL_1800|M.ulcerans_Agy99 VDRLVSAGMIDRQPHPTSRRELLAVLTKRGRDLVRRVTAHRRDEIARIVE Mb1439|M.bovis_AF2122/97 VDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVE Rv1404|M.tuberculosis_H37Rv VDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVE MLBr_00550|M.leprae_Br4923 VDRLVAARLIDRLPHPTSRRELLVALTKRGREVVRRVTAQRRVEIARIVE MAV_3374|M.avium_104 VDRLVAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRAEIAAIVA MAB_1021|M.abscessus_ATCC_1997 VDRLVSAGLIDRRPHPRSRRELVAELTAHGEGVVREVMAQRRAEIAEIAA Mflv_0628|M.gilvum_PYR-GCK VDTLTKAGFVTRKVNPRDRRSVVVAISKKGDQFMTEFLPGHYDFLQRLFA Mvan_0537|M.vanbaalenii_PYR-1 VDTLTKAGFVTRKVNPRDRRSVVVAISKKGDQFMTEFLPGHYDFLQRLFA MSMEG_5566|M.smegmatis_MC2_155 VDRLHASGHLVRRPDPANRSAVVLVLTDEGRRLVRRVESRRRRELGKALD TH_3245|M.thermoresistible__bu VDKMESLGLVKRLPHPADRRAFAVTLTDKARELLPALDAEGRAQEDAVTA ** : : * .* .* . :: .. .: . MMAR_2213|M.marinum_M QMPPAERQGLVRALTAFTAAGGEPDANVEMDL-- MUL_1800|M.ulcerans_Agy99 QMPPAERQGLVRALTAFTAAGGEPDANVEMDL-- Mb1439|M.bovis_AF2122/97 QMAPAERHGLVRALTAFTEAGGEPDARYEIE--- Rv1404|M.tuberculosis_H37Rv QMAPAERHGLVRALTAFTEAGGEPDARYEIE--- MLBr_00550|M.leprae_Br4923 KMPPSERLGLVRALTAFSTAGGEPDVRLDIISI- MAV_3374|M.avium_104 KMPPAERHGLVRALTAFTAAGGEPDVHLDAEIDL MAB_1021|M.abscessus_ATCC_1997 RMPARERRGLVRALDAFTAAGGESASPVDV---- Mflv_0628|M.gilvum_PYR-GCK GINPRHRQQLLARLNELIDCLENYPSGQRTS--- Mvan_0537|M.vanbaalenii_PYR-1 GINPRHRQQLLARLNELIDCLENYPSGQRTS--- MSMEG_5566|M.smegmatis_MC2_155 RLSPKERSQCIAALERLHEVLQAPEDPRIPY--- TH_3245|M.thermoresistible__bu AMTPAERRETLRLLQKMSSTVGLVPGVHPKLG-- : . .* : * :