For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GQAEEAPLGFLLYRAAAVLRPEVSTALSPLGLTLPEFVCLRILSASPGLSSAELARHTNVTPQAMNTVLR KLEEVGAVSRPASVPSGRALPATLTAPGRALLKRAEVVVRGADDRILAKLTPAEQREFKRMLEMLGTE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1822 | - | - | 100% (139) | transcriptional regulatory protein |
| M. marinum M | MMAR_2213 | - | 8e-08 | 33.66% (101) | transcriptional regulatory protein |
| M. marinum M | MMAR_0145 | - | 5e-05 | 29.84% (124) | transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2911 | - | 2e-57 | 79.14% (139) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_2467 | - | 6e-12 | 34.15% (123) | MarR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2887 | - | 2e-57 | 79.14% (139) | transcriptional regulatory protein |
| M. leprae Br4923 | MLBr_00550 | - | 7e-06 | 30.19% (106) | putative marR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_0326 | - | 8e-35 | 52.55% (137) | MarR family transcriptional regulator |
| M. avium 104 | MAV_3741 | - | 5e-53 | 73.38% (139) | MarR-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_2538 | - | 2e-39 | 62.79% (129) | MarR-family protein transcriptional regulator |
| M. thermoresistible (build 8) | TH_0263 | - | 6e-13 | 36.36% (110) | transcriptional regulator, MarR family protein |
| M. ulcerans Agy99 | MUL_2070 | - | 6e-72 | 99.28% (139) | transcriptional regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_4187 | - | 4e-12 | 34.96% (123) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2467|M.gilvum_PYR-GCK ------------------------------MDAHDVAGIELTDNILWLLK
Mvan_4187|M.vanbaalenii_PYR-1 ------------------------------MDARDVTGIELTDNILWLLK
TH_0263|M.thermoresistible__bu --------------------------------VADDLAMEFGDNLLWHLK
MMAR_1822|M.marinum_M -----------------------------------MG-QAEEAPLGFLLY
MUL_2070|M.ulcerans_Agy99 --------------------------------MVDMG-QAEEAPLGFLLY
Mb2911|M.bovis_AF2122/97 -----------------------------------MG-LADDAPLGYLLY
Rv2887|M.tuberculosis_H37Rv -----------------------------------MG-LADDAPLGYLLY
MAV_3741|M.avium_104 MPPDWLPPDGYPVAGPAITPPNTRTGAPRYVKIVDMT-EADDAPLGYLLY
MSMEG_2538|M.smegmatis_MC2_155 --------------------------------MLDMGDILEVQPLGFLMY
MAB_0326|M.abscessus_ATCC_1997 -----------------------------------MSESDEIEPLGYLMF
MLBr_00550|M.leprae_Br4923 --------------------------------MVTDDATVADESLDDITD
:
Mflv_2467|M.gilvum_PYR-GCK QAFYFSLTSVNEAVSEHG-----VSTAQIGVLRQLANEPGLSGAELARRL
Mvan_4187|M.vanbaalenii_PYR-1 QAFYFSLTTVNEAISEHG-----VSTAQIGVLRQLANEPGLSGAELARRL
TH_0263|M.thermoresistible__bu QAWYFSLTAVNDAVSKHG-----VSTAQIGVLRQLSNEPGLSGAELARRL
MMAR_1822|M.marinum_M RAAAVLRPEVSTALSPLG-----LTLPEFVCLRILSASPGLSSAELARHT
MUL_2070|M.ulcerans_Agy99 RAAAVLRPEVSTALSPLG-----LTLPEFVCLRILSASPGLSSAELARHT
Mb2911|M.bovis_AF2122/97 RVGAVLRPEVSAALSPLG-----LTLPEFVCLRMLSQSPGLSSAELARHA
Rv2887|M.tuberculosis_H37Rv RVGAVLRPEVSAALSPLG-----LTLPEFVCLRMLSQSPGLSSAELARHA
MAV_3741|M.avium_104 RVGAALRPEVSGALGPLG-----LTLPEFVCLRILSMFPGMSSAELSRRA
MSMEG_2538|M.smegmatis_MC2_155 RVMAVLQPAVAAQLQQLG-----LTLPEFVCLRILSAQPRQSNAELARHI
MAB_0326|M.abscessus_ATCC_1997 RAGAVMRPRVLAVLRPLG-----LGMPEFMCLRMLNENPGRTSAELAREN
MLBr_00550|M.leprae_Br4923 ALLTASRLLVAVSAHSIGQVDETITFPQFRTLVILSNRGPVNLATLAGLL
* * : .:: * * . * *:
Mflv_2467|M.gilvum_PYR-GCK LISPQGVQLALTALERRGLVERKQNPSHGRILQAFLTDQGRDVAAAVVQD
Mvan_4187|M.vanbaalenii_PYR-1 LISPQGVQLALTALERQGLVERKQNPAHGRILQAFLTDKGRKVAAAVLHD
TH_0263|M.thermoresistible__bu LITPQGVQLALKSLEQRGLIERRPDPQHARILKVYLTREGRSVAKAVVGD
MMAR_1822|M.marinum_M NVTPQAMNTVLRKLEEVGAVSRPASVPSGRALPATLTAPGRALLKRAEVV
MUL_2070|M.ulcerans_Agy99 NVTSQAMNTVLRKLEEVGAVSRPASVPSGRALPATLTAPGRALLKRAEVV
Mb2911|M.bovis_AF2122/97 SVTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAV
Rv2887|M.tuberculosis_H37Rv SVTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAV
MAV_3741|M.avium_104 GVTPQAMNTVLRRLQEVGAVARPSSVSSGRSLPAHLTGAGRTLLKRAEAA
MSMEG_2538|M.smegmatis_MC2_155 NVSPQAMNNVVRALQEKGAVRRPEAASSGRALPAELTTEGAKLLKRAEAA
MAB_0326|M.abscessus_ATCC_1997 NVSAQAMNQVLNGLQNISLVSRPAVPASGRALPAKVTAKGKALLKRVESA
MLBr_00550|M.leprae_Br4923 GVQPSATGRMVDRLVAARLIDRLPHPTSRRELLVALTKRGREVVRRVTAQ
: ... : * : * * * . :* * : .
Mflv_2467|M.gilvum_PYR-GCK AIAAHDKVFGVLSKAEQKTLRELLGRVVEQGTGHELFADHVDT
Mvan_4187|M.vanbaalenii_PYR-1 AIAAHDRVFGVLSKAEQQTLRELLGRVVEQGTGHELYTDHVDP
TH_0263|M.thermoresistible__bu AIAAHEAVFGVLTPEEQRTLRDLLARVVEKGTGHTLADDHITD
MMAR_1822|M.marinum_M VRGADDRILAKLTPAEQREFKRMLEMLGTE-------------
MUL_2070|M.ulcerans_Agy99 VRGADDRILAKLTPAEQREFKRMLEMLGTE-------------
Mb2911|M.bovis_AF2122/97 VRAADARVLARLTAPQQREFKRMLEKLGSD-------------
Rv2887|M.tuberculosis_H37Rv VRAADARVLARLTAPQQREFKRMLEKLGSD-------------
MAV_3741|M.avium_104 VRGADARILAKLTETQQREFKRMLQKLGSDG------------
MSMEG_2538|M.smegmatis_MC2_155 ALAAEEEALANLTEAQRRELKRLLAHAVD--------------
MAB_0326|M.abscessus_ATCC_1997 IWAAEDEMFSRLGVDDQRELRRILGRLIDAASENE--------
MLBr_00550|M.leprae_Br4923 RRVEIARIVEKMPPSERLGLVRALTAFSTAGGEPDVRLDIISI
. : :: : *