For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3245 | - | - | 100% (158) | - |
| M. thermoresistible (build 8) | TH_0263 | - | 1e-07 | 30.48% (105) | transcriptional regulator, MarR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2911 | - | 8e-12 | 32.03% (128) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_2467 | - | 5e-06 | 27.62% (105) | MarR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2887 | - | 8e-12 | 32.03% (128) | transcriptional regulatory protein |
| M. leprae Br4923 | MLBr_00550 | - | 6e-10 | 30.77% (104) | putative marR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_2293 | - | 3e-13 | 31.01% (129) | MarR family transcriptional regulator |
| M. marinum M | MMAR_1822 | - | 4e-12 | 32.81% (128) | transcriptional regulatory protein |
| M. avium 104 | MAV_3374 | - | 9e-12 | 33.64% (110) | transcriptional regulator, MarR family protein |
| M. smegmatis MC2 155 | MSMEG_2538 | - | 3e-09 | 30.71% (127) | MarR-family protein transcriptional regulator |
| M. ulcerans Agy99 | MUL_2070 | - | 2e-12 | 32.81% (128) | transcriptional regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_1559 | - | 3e-09 | 30.00% (100) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2911|M.bovis_AF2122/97 -----MG-LADDAPLGYLLYRVGAVLRPEVSAALSPLG-----LTLPEFV
Rv2887|M.tuberculosis_H37Rv -----MG-LADDAPLGYLLYRVGAVLRPEVSAALSPLG-----LTLPEFV
MMAR_1822|M.marinum_M -----MG-QAEEAPLGFLLYRAAAVLRPEVSTALSPLG-----LTLPEFV
MUL_2070|M.ulcerans_Agy99 --MVDMG-QAEEAPLGFLLYRAAAVLRPEVSTALSPLG-----LTLPEFV
MSMEG_2538|M.smegmatis_MC2_155 --MLDMGDILEVQPLGFLMYRVMAVLQPAVAAQLQQLG-----LTLPEFV
MAB_2293|M.abscessus_ATCC_1997 ---MAQQNLDGRPDIAALLVPLGRSFMRAELPLLETHG-----VSMWAYA
Mvan_1559|M.vanbaalenii_PYR-1 ---MGKRAGAPRQDLAAMLAPLMRELLAAEQSVLAKHG-----LTMWGYA
MLBr_00550|M.leprae_Br4923 --MVTDDATVADESLDDITDALLTASRLLVAVSAHSIGQVDETITFPQFR
MAV_3374|M.avium_104 ---MAADHTTVDESLDAITDALLTASRLLMAISARSVGQVDETITIPQFR
Mflv_2467|M.gilvum_PYR-GCK MDAHDVAGIELTDNILWLLKQAFYFSLTSVNEAVSEHG-----VSTAQIG
TH_3245|M.thermoresistible__bu MEERSSGIAALHQRIPFLLSQLGAHLAEDFVRRLEPFG-----IEPRIYA
: : * :
Mb2911|M.bovis_AF2122/97 CLRMLSQSPGLSSAELARHASVTPQAMNTVLRKLEDAGAVARPASVSSGR
Rv2887|M.tuberculosis_H37Rv CLRMLSQSPGLSSAELARHASVTPQAMNTVLRKLEDAGAVARPASVSSGR
MMAR_1822|M.marinum_M CLRILSASPGLSSAELARHTNVTPQAMNTVLRKLEEVGAVSRPASVPSGR
MUL_2070|M.ulcerans_Agy99 CLRILSASPGLSSAELARHTNVTSQAMNTVLRKLEEVGAVSRPASVPSGR
MSMEG_2538|M.smegmatis_MC2_155 CLRILSAQPRQSNAELARHINVSPQAMNNVVRALQEKGAVRRPEAASSGR
MAB_2293|M.abscessus_ATCC_1997 VLTALRDNEASSQASLADAIGADRTRIIAVLDDLQERKLINRQPDPSDRR
Mvan_1559|M.vanbaalenii_PYR-1 VLSTLDRSAFRTQAALAEAINADKTRIIRTLDDLQDDGYIERHPDPDDRR
MLBr_00550|M.leprae_Br4923 TLVILSNRGPVNLATLAGLLGVQPSATGRMVDRLVAARLIDRLPHPTSRR
MAV_3374|M.avium_104 TLVILSNRGPVNLATLAGLLGVQPSATGRMVDRLVAAGLIDRLPHPTSRR
Mflv_2467|M.gilvum_PYR-GCK VLRQLANEPGLSGAELARRLLISPQGVQLALTALERRGLVERKQNPSHGR
TH_3245|M.thermoresistible__bu VLTALSEVDGQSQRELSAQLGIHRNAMVAVVDKMESLGLVKRLPHPADRR
* * . *: : : : * *
Mb2911|M.bovis_AF2122/97 SLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQREFKRMLEKLGSD
Rv2887|M.tuberculosis_H37Rv SLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQREFKRMLEKLGSD
MMAR_1822|M.marinum_M ALPATLTAPGRALLKRAEVVVRGADDRILAKLTPAEQREFKRMLEMLGTE
MUL_2070|M.ulcerans_Agy99 ALPATLTAPGRALLKRAEVVVRGADDRILAKLTPAEQREFKRMLEMLGTE
MSMEG_2538|M.smegmatis_MC2_155 ALPAELTTEGAKLLKRAEAAALAAEEEALANLTEAQRRELKRLLAHAVD-
MAB_2293|M.abscessus_ATCC_1997 SNLLSLTPAGRKTVTAVQKAIQDNENRILAGVSSVDRGAFLRVLEYLAHL
Mvan_1559|M.vanbaalenii_PYR-1 VRLLAITDKGRDVKDAVQDEIQRGEERWLGELTQEERRVFLRALARMAPG
MLBr_00550|M.leprae_Br4923 ELLVALTKRGREVVRRVTAQRRVEIARIVEKMPPSERLGLVRALTAFSTA
MAV_3374|M.avium_104 ELLAALTTRGRDVVHQVTAHRRAEIAAIVAKMPPAERHGLVRALTAFTAA
Mflv_2467|M.gilvum_PYR-GCK ILQAFLTDQGRDVAAAVVQDAIAAHDKVFGVLSKAEQKTLRELLGRVVEQ
TH_3245|M.thermoresistible__bu AFAVTLTDKARELLPALDAEGRAQEDAVTAAMTPAERRETLRLLQKMSST
:* . :. :: . *
Mb2911|M.bovis_AF2122/97 --------------
Rv2887|M.tuberculosis_H37Rv --------------
MMAR_1822|M.marinum_M --------------
MUL_2070|M.ulcerans_Agy99 --------------
MSMEG_2538|M.smegmatis_MC2_155 --------------
MAB_2293|M.abscessus_ATCC_1997 DDPQFSPRN-----
Mvan_1559|M.vanbaalenii_PYR-1 --------------
MLBr_00550|M.leprae_Br4923 GGEPDVRLD-IISI
MAV_3374|M.avium_104 GGEPDVHLDAEIDL
Mflv_2467|M.gilvum_PYR-GCK GTGHELFADHVDT-
TH_3245|M.thermoresistible__bu VGLVPGVHPKLG--