For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTVDDVDLDESLDALADSLLVASRLLLAISARSIAQVDETITFPQFRTLVILFNEGPINLATLAQSLGVQ PSTTGRMVDRLVSAGLIDRRPHPRSRRELVAELTAHGEGVVREVMAQRRAEIAEIAARMPARERRGLVRA LDAFTAAGGESASPVDV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1021 | - | - | 100% (157) | MarR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0879 | - | 2e-09 | 28.68% (136) | putative HTH-type transcriptional regulator MarR |
M. abscessus ATCC 19977 | MAB_2472c | - | 4e-08 | 30.89% (123) | MarR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1439 | - | 4e-49 | 71.13% (142) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_0628 | - | 2e-09 | 28.46% (130) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1404 | - | 4e-49 | 71.13% (142) | transcriptional regulatory protein |
M. leprae Br4923 | MLBr_00550 | - | 2e-52 | 68.15% (157) | putative marR-family transcriptional regulator |
M. marinum M | MMAR_2213 | - | 7e-52 | 69.80% (149) | transcriptional regulatory protein |
M. avium 104 | MAV_3374 | - | 3e-55 | 72.67% (150) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_5566 | - | 1e-13 | 34.19% (117) | transcriptional regulator |
M. thermoresistible (build 8) | TH_3245 | - | 2e-07 | 31.03% (87) | PUTATIVE - |
M. ulcerans Agy99 | MUL_1800 | - | 3e-51 | 69.13% (149) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_6049 | - | 8e-10 | 28.10% (121) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb1439|M.bovis_AF2122/97 -------------------------------------------------- Rv1404|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2213|M.marinum_M -------------------------------------------------- MUL_1800|M.ulcerans_Agy99 MARTAIANKAISEYLRPRGSLGSGTEANTSRNSDPMSSLRSPALQWSNTS MLBr_00550|M.leprae_Br4923 -------------------------------------------------- MAV_3374|M.avium_104 -------------------------------------------------- MAB_1021|M.abscessus_ATCC_1997 -------------------------------------------------- MSMEG_5566|M.smegmatis_MC2_155 -------------------------------------------------- TH_3245|M.thermoresistible__bu -------------------------------------------------- Mvan_6049|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0628|M.gilvum_PYR-GCK -------------------------------------------------- Mb1439|M.bovis_AF2122/97 -------------------------------------------------- Rv1404|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2213|M.marinum_M -------------------------------------------------- MUL_1800|M.ulcerans_Agy99 GTDDTGNTETVGTGNSRPTTNSNQLDRSPDSPCLHCGPNSAAPKIINPAH MLBr_00550|M.leprae_Br4923 -------------------------------------------------- MAV_3374|M.avium_104 -------------------------------------------------- MAB_1021|M.abscessus_ATCC_1997 -------------------------------------------------- MSMEG_5566|M.smegmatis_MC2_155 -------------------------------------------------- TH_3245|M.thermoresistible__bu -------------------------------------------------- Mvan_6049|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0628|M.gilvum_PYR-GCK -------------------------------------------------- Mb1439|M.bovis_AF2122/97 ---------------MMPTEYPATAEESVDVITDALLTASRLLVAISAHS Rv1404|M.tuberculosis_H37Rv ---------------MMPTEYPATAEESVDVITDALLTASRLLVAISAHS MMAR_2213|M.marinum_M ----------------MSTENATAAEESLDMITDALLTASRLLVGISAHS MUL_1800|M.ulcerans_Agy99 KPANQQRRSPGGRGPLMSTENATAAEESLDMITDALPTASRLLVGISAHS MLBr_00550|M.leprae_Br4923 ----------------MVTDDATVADESLDDITDALLTASRLLVAVSAHS MAV_3374|M.avium_104 ----------------MAADH-TTVDESLDAITDALLTASRLLMAISARS MAB_1021|M.abscessus_ATCC_1997 ----------------MTVDD-VDLDESLDALADSLLVASRLLLAISARS MSMEG_5566|M.smegmatis_MC2_155 --------------------------------MVAVQLVTSDLVGVALRS TH_3245|M.thermoresistible__bu -----------------MEERSSGIAALHQRIPFLLSQLGAHLAEDFVRR Mvan_6049|M.vanbaalenii_PYR-1 --------------------MVPTEARVSELASELQRVLSKVLSVMRHTG Mflv_0628|M.gilvum_PYR-GCK ----MTTEKLTMAQQVAAKTREAGPDHDPSSLALPLALYRAVTAFGRVAV Mb1439|M.bovis_AF2122/97 IAQVDENITIPQFRTLVILS-NHGPINLATLATLLGVQPSATGRMVDRLV Rv1404|M.tuberculosis_H37Rv IAQVDENITIPQFRTLVILS-NHGPINLATLATLLGVQPSATGRMVDRLV MMAR_2213|M.marinum_M IAQVDENITIPQFRTLVILS-NRGPVNLATLANLLGVQPSATGRMVDRLV MUL_1800|M.ulcerans_Agy99 IAQVDENITIPQFRTLVILS-NRGPVNLATLANLLGVQPSATGRMVDRLV MLBr_00550|M.leprae_Br4923 IGQVDETITFPQFRTLVILS-NRGPVNLATLAGLLGVQPSATGRMVDRLV MAV_3374|M.avium_104 VGQVDETITIPQFRTLVILS-NRGPVNLATLAGLLGVQPSATGRMVDRLV MAB_1021|M.abscessus_ATCC_1997 IAQVDETITFPQFRTLVILF-NEGPINLATLAQSLGVQPSTTGRMVDRLV MSMEG_5566|M.smegmatis_MC2_155 VDGL--EVSLPQFRLLRVLD-EVGEAGATRCAEMLGIGGSSITRLVDRLH TH_3245|M.thermoresistible__bu LEPFG--IEPRIYAVLTALS-EVDGQSQRELSAQLGIHRNAMVAVVDKME Mvan_6049|M.vanbaalenii_PYR-1 RTATSGDLTLAQLSILLTLF-DQGPMRMTELAAHEKVRTPTTTVAIRRLE Mflv_0628|M.gilvum_PYR-GCK DELTPVDLSMSQFNVLTVLKRADGPITMGALADSISVRQASLTSVVDTLT : * * . : : : : : Mb1439|M.bovis_AF2122/97 GAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPA Rv1404|M.tuberculosis_H37Rv GAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPA MMAR_2213|M.marinum_M SAGMIDRQPHPTSRRELLAVLTKRGRDLVRRVTAHRRDEIARIVEQMPPA MUL_1800|M.ulcerans_Agy99 SAGMIDRQPHPTSRRELLAVLTKRGRDLVRRVTAHRRDEIARIVEQMPPA MLBr_00550|M.leprae_Br4923 AARLIDRLPHPTSRRELLVALTKRGREVVRRVTAQRRVEIARIVEKMPPS MAV_3374|M.avium_104 AAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRAEIAAIVAKMPPA MAB_1021|M.abscessus_ATCC_1997 SAGLIDRRPHPRSRRELVAELTAHGEGVVREVMAQRRAEIAEIAARMPAR MSMEG_5566|M.smegmatis_MC2_155 ASGHLVRRPDPANRSAVVLVLTDEGRRLVRRVESRRRRELGKALDRLSPK TH_3245|M.thermoresistible__bu SLGLVKRLPHPADRRAFAVTLTDKARELLPALDAEGRAQEDAVTAAMTPA Mvan_6049|M.vanbaalenii_PYR-1 KLGLVKRDRDPSDLRAVLVDITPEGLAQHREALASRQAHLASLLSKLSDE Mflv_0628|M.gilvum_PYR-GCK KAGFVTRKVNPRDRRSVVVAISKKGDQFMTEFLPGHYDFLQRLFAGINPR : * .* . . :: .. : Mb1439|M.bovis_AF2122/97 ERHGLVRALTAFTEAGGEPDARYEIE--- Rv1404|M.tuberculosis_H37Rv ERHGLVRALTAFTEAGGEPDARYEIE--- MMAR_2213|M.marinum_M ERQGLVRALTAFTAAGGEPDANVEMDL-- MUL_1800|M.ulcerans_Agy99 ERQGLVRALTAFTAAGGEPDANVEMDL-- MLBr_00550|M.leprae_Br4923 ERLGLVRALTAFSTAGGEPDVRLDIISI- MAV_3374|M.avium_104 ERHGLVRALTAFTAAGGEPDVHLDAEIDL MAB_1021|M.abscessus_ATCC_1997 ERRGLVRALDAFTAAGGESASPVDV---- MSMEG_5566|M.smegmatis_MC2_155 ERSQCIAALERLHEVLQAPEDPRIPY--- TH_3245|M.thermoresistible__bu ERRETLRLLQKMSSTVGLVPGVHPKLG-- Mvan_6049|M.vanbaalenii_PYR-1 ELDALTKALAPLERIAE------------ Mflv_0628|M.gilvum_PYR-GCK HRQQLLARLNELIDCLENYPSGQRTS--- . * :