For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SWVMREMFDREARLSWILAALAGLVGAAAFTHTAGYFVTFMTGNSERAVLGFFTNDRWLSISAALLLASF VAGVVIASLCRQHIWVDHPHGPTVLTTLCLGIAAALDIVVHGWSTGRVTFLPILAVTFGIGALNTSFVKN GEVSISLSYMTGTLVKLGQGIQRHLSGGQATAWLGYLLLYASYIVGATVGGVLSLVIGGSQMLAVATVAC ALTTGYTYFHADRRALLKERNGERRSGKVIADNDLERVVADEAPDRSE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2141 | - | - | 100% (259) | hypothetical protein MMAR_2141 |
M. marinum M | MMAR_0327 | - | 2e-93 | 68.58% (226) | hypothetical protein MMAR_0327 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0133 | - | 7e-90 | 66.23% (228) | transmembrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv0128 | - | 7e-90 | 66.23% (228) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3210c | - | 6e-61 | 52.21% (226) | hypothetical protein MAB_3210c |
M. avium 104 | MAV_5184 | - | 1e-87 | 65.64% (227) | hypothetical protein MAV_5184 |
M. smegmatis MC2 155 | MSMEG_0145 | - | 6e-08 | 27.01% (211) | hypothetical protein MSMEG_0145 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb0133|M.bovis_AF2122/97 ------------------------------------MQREIYD-GEARLS Rv0128|M.tuberculosis_H37Rv ------------------------------------MQREIYD-GEARLS MAV_5184|M.avium_104 ------------------------------------MPSEINN-SETRLS MMAR_2141|M.marinum_M ---------------------------------MSWVMREMFD-REARLS MAB_3210c|M.abscessus_ATCC_199 MNRKGRSATLESGPQGEIEIGSDKGAIAPLKGDDAVITREAAIGSEARLS MSMEG_0145|M.smegmatis_MC2_155 ----------------------------------MAIASPVSERLTVTAL : . Mb0133|M.bovis_AF2122/97 WVLAALAGILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS- Rv0128|M.tuberculosis_H37Rv WVLAALAGILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS- MAV_5184|M.avium_104 WVLAVLAGVLGATAFTHSAGYFVTFMTGNAQRAMLGYFRGDVVLSVTAG- MMAR_2141|M.marinum_M WILAALAGLVGAAAFTHTAGYFVTFMTGNSERAVLGFFTNDRWLSISAA- MAB_3210c|M.abscessus_ATCC_199 WLLSGLAGMVGAVAFLHSAGYFVTFMTGNTERAVLTWFKVTDKQQVAGAG MSMEG_0145|M.smegmatis_MC2_155 LLLTVATGLVDAISVLVLGHVFVANMTGN-VIFLGFWFVPHSGVDLTAA- :*: :*::.* :. . **: **** : * .::.. Mb0133|M.bovis_AF2122/97 -----LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDIM Rv0128|M.tuberculosis_H37Rv -----LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDIM MAV_5184|M.avium_104 -----VLIVCFVAGVVIASVCRRHFWVDHPHGPTVLTTFSLVAATLVDVI MMAR_2141|M.marinum_M -----LLLASFVAGVVIASLCRQHIWVDHPHGPTVLTTLCLGIAAALDIV MAB_3210c|M.abscessus_ATCC_199 PIAAISMIGAFLFGVIVASYCRRKFWKNHPHGATVLTTVGLLAAAAVDFY MSMEG_0145|M.smegmatis_MC2_155 ----VVAFPAFVVGTIIGGRLARHLDGQVRTWLTTALGVEVVLLTVLSIL : *: *.::.. ::: *. . : : :.. Mb0133|M.bovis_AF2122/97 L-GGWHES--MLDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLVK Rv0128|M.tuberculosis_H37Rv L-GGWHES--MLDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLVK MAV_5184|M.avium_104 D-EGWEEN--LLDFAPIMLVTFGIGALNTSFVKDGEVSVPLSYVTGTLVK MMAR_2141|M.marinum_M V-HGWSTG--RVTFLPILAVTFGIGALNTSFVKNGEVSISLSYMTGTLVK MAB_3210c|M.abscessus_ATCC_199 Q-DRSFTANIDVHFTPILLLAFSIGALNTSFVKKGETAIPLSYVTGTVVK MSMEG_0145|M.smegmatis_MC2_155 AGTGVLDYQDNTKLFLIAGLAITFGIQNATARQFGIQELSTTVLTSTIVG : * :.: :* *:: : * :. : :*.*:* Mb0133|M.bovis_AF2122/97 MGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLAV Rv0128|M.tuberculosis_H37Rv MGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLAV MAV_5184|M.avium_104 MGQGIERHIAG-GTAADWLGYFLLFASFVVGATVGGFISLFVNGTSMLVA MMAR_2141|M.marinum_M LGQGIQRHLSG-GQATAWLGYLLLYASYIVGATVGGVLSLVIGGSQMLAV MAB_3210c|M.abscessus_ATCC_199 LGQGIERHLFGRGSVFEWLGYAMLYLSFVLGAATGGVIASVYSGSKVILT MSMEG_0145|M.smegmatis_MC2_155 LG--FDSRLAG-GTGEREKLRYAVVATMCLGAVIGATLSRFTVAPVIALA :* :: :: * * : : :**. *. :: . .. : . Mb0133|M.bovis_AF2122/97 AAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTPA Rv0128|M.tuberculosis_H37Rv AAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTPA MAV_5184|M.avium_104 ATVMCALTTGYTYFHSDRRALLDEA------------------------- MMAR_2141|M.marinum_M ATVACALTTGYTYFHADRRALLKERNGE--RRSGKVIADNDLERVVADEA MAB_3210c|M.abscessus_ATCC_199 VGIICGATTLVTFFYSDRKTILG--------------------------- MSMEG_0145|M.smegmatis_MC2_155 AVVIATSACIFRFGR----------------------------------- . : . : : Mb0133|M.bovis_AF2122/97 TNYGSS Rv0128|M.tuberculosis_H37Rv TNYGSS MAV_5184|M.avium_104 ------ MMAR_2141|M.marinum_M PDRSE- MAB_3210c|M.abscessus_ATCC_199 ------ MSMEG_0145|M.smegmatis_MC2_155 ------