For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VQREIYDGEARLSWVLAALAGILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTASLLILFFVA GVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDIMLGGWHESMLDFVPILFVVFGIGALNTSFVKDGE VSVPLSYVTGTLVKMGQGIERHLAGGKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLAVAAVVCAA TTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTPATNYGSS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0128 | - | - | 100% (259) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0133 | - | 1e-148 | 100.00% (259) | transmembrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3210c | - | 2e-62 | 53.02% (232) | hypothetical protein MAB_3210c |
M. marinum M | MMAR_0327 | - | 1e-100 | 74.67% (225) | hypothetical protein MMAR_0327 |
M. avium 104 | MAV_5184 | - | 6e-94 | 72.69% (227) | hypothetical protein MAV_5184 |
M. smegmatis MC2 155 | MSMEG_0145 | - | 9e-07 | 28.50% (207) | hypothetical protein MSMEG_0145 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv0128|M.tuberculosis_H37Rv -------------------------------------MQREIYDGEARLS Mb0133|M.bovis_AF2122/97 -------------------------------------MQREIYDGEARLS MMAR_0327|M.marinum_M -------------------------------------MRSDIFDSEARLS MAV_5184|M.avium_104 -------------------------------------MPSEINNSETRLS MAB_3210c|M.abscessus_ATCC_199 MNRKGRSATLESGPQGEIEIGSDKGAIAPLKGDDAVITREAAIGSEARLS MSMEG_0145|M.smegmatis_MC2_155 ----------------------------------MAIASPVSERLTVTAL . Rv0128|M.tuberculosis_H37Rv WVLAALAGILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS- Mb0133|M.bovis_AF2122/97 WVLAALAGILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS- MMAR_0327|M.marinum_M WVLAVLAGVLGATAFTHSAGYFVTFMTGNAQRAVLGYFRDDVWLSVTAG- MAV_5184|M.avium_104 WVLAVLAGVLGATAFTHSAGYFVTFMTGNAQRAMLGYFRGDVVLSVTAG- MAB_3210c|M.abscessus_ATCC_199 WLLSGLAGMVGAVAFLHSAGYFVTFMTGNTERAVLTWFKVTDKQQVAGAG MSMEG_0145|M.smegmatis_MC2_155 LLLTVATGLVDAISVLVLGHVFVANMTGN-VIFLGFWFVPHSGVDLTAA- :*: :*::.* :. . **: **** : * .::.. Rv0128|M.tuberculosis_H37Rv -----LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDIM Mb0133|M.bovis_AF2122/97 -----LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDIM MMAR_0327|M.marinum_M -----LLLVCFLVGVVVASVCRRHFWVDHPHGPTVLTTFSLVAATALDIV MAV_5184|M.avium_104 -----VLIVCFVAGVVIASVCRRHFWVDHPHGPTVLTTFSLVAATLVDVI MAB_3210c|M.abscessus_ATCC_199 PIAAISMIGAFLFGVIVASYCRRKFWKNHPHGATVLTTVGLLAAAAVDFY MSMEG_0145|M.smegmatis_MC2_155 ----VVAFPAFVVGTIIGGRLARHLDGQVRTWLTTALGVEVVLLTVLSIL : *: *.::.. *:: *. . :: : :.. Rv0128|M.tuberculosis_H37Rv LG-GWHESM--LDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLVK Mb0133|M.bovis_AF2122/97 LG-GWHESM--LDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLVK MMAR_0327|M.marinum_M IG-GWEGSQ--LDFLPIMLVVFGVGSLNTSFVKDGEVSVPLSYVTGTLVK MAV_5184|M.avium_104 DE-GWEENL--LDFAPIMLVTFGIGALNTSFVKDGEVSVPLSYVTGTLVK MAB_3210c|M.abscessus_ATCC_199 QDRSFTANID-VHFTPILLLAFSIGALNTSFVKKGETAIPLSYVTGTVVK MSMEG_0145|M.smegmatis_MC2_155 AGTGVLDYQDNTKLFLIAGLAITFGIQNATARQFGIQELSTTVLTSTIVG . .: * :.: .* *:: : * :. : :*.*:* Rv0128|M.tuberculosis_H37Rv MGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLAV Mb0133|M.bovis_AF2122/97 MGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLAV MMAR_0327|M.marinum_M MGQGIERHIAG-GQAADWLGYFMLLASFILGATVGGTISLVVSGTQMLAV MAV_5184|M.avium_104 MGQGIERHIAG-GTAADWLGYFLLFASFVVGATVGGFISLFVNGTSMLVA MAB_3210c|M.abscessus_ATCC_199 LGQGIERHLFGRGSVFEWLGYAMLYLSFVLGAATGGVIASVYSGSKVILT MSMEG_0145|M.smegmatis_MC2_155 LG--FDSRLAG-GTGEREKLRYAVVATMCLGAVIGATLSRFTVAPVIALA :* :: :: * * : :: :**. *. :: . .. : . Rv0128|M.tuberculosis_H37Rv AAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTPA Mb0133|M.bovis_AF2122/97 AAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTPA MMAR_0327|M.marinum_M ASTVCALTTGFTYFHSDRRALLK--------------------------- MAV_5184|M.avium_104 ATVMCALTTGYTYFHSDRRALLDEA------------------------- MAB_3210c|M.abscessus_ATCC_199 VGIICGATTLVTFFYSDRKTILG--------------------------- MSMEG_0145|M.smegmatis_MC2_155 AVVIATSACIFRFGR----------------------------------- . :. : : Rv0128|M.tuberculosis_H37Rv TNYGSS Mb0133|M.bovis_AF2122/97 TNYGSS MMAR_0327|M.marinum_M ------ MAV_5184|M.avium_104 ------ MAB_3210c|M.abscessus_ATCC_199 ------ MSMEG_0145|M.smegmatis_MC2_155 ------