For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NRKGRSATLESGPQGEIEIGSDKGAIAPLKGDDAVITREAAIGSEARLSWLLSGLAGMVGAVAFLHSAGY FVTFMTGNTERAVLTWFKVTDKQQVAGAGPIAAISMIGAFLFGVIVASYCRRKFWKNHPHGATVLTTVGL LAAAAVDFYQDRSFTANIDVHFTPILLLAFSIGALNTSFVKKGETAIPLSYVTGTVVKLGQGIERHLFGR GSVFEWLGYAMLYLSFVLGAATGGVIASVYSGSKVILTVGIICGATTLVTFFYSDRKTILG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3210c | - | - | 100% (272) | hypothetical protein MAB_3210c |
| M. abscessus ATCC 19977 | MAB_3407 | - | 1e-19 | 29.77% (215) | hypothetical protein MAB_3407 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0133 | - | 2e-62 | 53.02% (232) | transmembrane protein |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv0128 | - | 2e-62 | 53.02% (232) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_0327 | - | 3e-63 | 52.79% (233) | hypothetical protein MMAR_0327 |
| M. avium 104 | MAV_5184 | - | 6e-62 | 51.98% (227) | hypothetical protein MAV_5184 |
| M. smegmatis MC2 155 | MSMEG_0145 | - | 8e-06 | 26.03% (219) | hypothetical protein MSMEG_0145 |
| M. thermoresistible (build 8) | TH_2076 | - | 5e-06 | 27.36% (212) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0327|M.marinum_M -------------------------------------MRSDIFDSEARLS
MAV_5184|M.avium_104 -------------------------------------MPSEINNSETRLS
Mb0133|M.bovis_AF2122/97 -------------------------------------MQREIYDGEARLS
Rv0128|M.tuberculosis_H37Rv -------------------------------------MQREIYDGEARLS
MAB_3210c|M.abscessus_ATCC_199 MNRKGRSATLESGPQGEIEIGSDKGAIAPLKGDDAVITREAAIGSEARLS
MSMEG_0145|M.smegmatis_MC2_155 -----------------------------------MAIASPVSERLTVTA
TH_2076|M.thermoresistible__bu -----------------------------------MAVASPVTPRLTVLA
: :
MMAR_0327|M.marinum_M WVLAVLAG-VLGATAFTHSAGYFVTFMTGNAQRAVLGYFRDDVWLSVTAG
MAV_5184|M.avium_104 WVLAVLAG-VLGATAFTHSAGYFVTFMTGNAQRAMLGYFRGDVVLSVTAG
Mb0133|M.bovis_AF2122/97 WVLAALAG-ILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS
Rv0128|M.tuberculosis_H37Rv WVLAALAG-ILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS
MAB_3210c|M.abscessus_ATCC_199 WLLSGLAG-MVGAVAFLHSAGYFVTFMTGNTERAVLTWFKVTDKQQVAGA
MSMEG_0145|M.smegmatis_MC2_155 LLLLTVATGLVDAISVLVLGHVFVANMTGN-VIFLGFWFVPHSGVDLTAA
TH_2076|M.thermoresistible__bu LLLMTFATGLVDAVSVLVLGHVFVANMTGN-VIFLGFWFVPTSGVDLTAA
:* .* ::.* :. . **: **** : * .::..
MMAR_0327|M.marinum_M ------LLLVCFLVGVVVASVCRRHFWVDHPHGPTVLTTFSLVAATALDI
MAV_5184|M.avium_104 ------VLIVCFVAGVVIASVCRRHFWVDHPHGPTVLTTFSLVAATLVDV
Mb0133|M.bovis_AF2122/97 ------LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDI
Rv0128|M.tuberculosis_H37Rv ------LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDI
MAB_3210c|M.abscessus_ATCC_199 GPIAAISMIGAFLFGVIVASYCRRKFWKNHPHGATVLTTVGLLAAAAVDF
MSMEG_0145|M.smegmatis_MC2_155 -----VVAFPAFVVGTIIGGRLARHLDGQVRTWLTTALGVEVVLLTVLSI
TH_2076|M.thermoresistible__bu -----VVAFLAFLVGTVIGGRLARHLAHHVRGWITSALCVETVLLLALSA
: *: *.::.. *:: * . : :.
MMAR_0327|M.marinum_M VIG-GWEGSQ--LDFLPIMLVVFGVGSLNTSFVKDGEVSVPLSYVTGTLV
MAV_5184|M.avium_104 IDE-GWEENL--LDFAPIMLVTFGIGALNTSFVKDGEVSVPLSYVTGTLV
Mb0133|M.bovis_AF2122/97 MLG-GWHESM--LDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLV
Rv0128|M.tuberculosis_H37Rv MLG-GWHESM--LDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLV
MAB_3210c|M.abscessus_ATCC_199 YQDRSFTANID-VHFTPILLLAFSIGALNTSFVKKGETAIPLSYVTGTVV
MSMEG_0145|M.smegmatis_MC2_155 LAGTGVLDYQDNTKLFLIAGLAITFGIQNATARQFGIQELSTTVLTSTIV
TH_2076|M.thermoresistible__bu LAGAGWLDYHNDQKFILIAGLAVAFGLQNASARRFGIQELSTTVLTSTIV
. .: * :.. .* *:: : * :. : :*.*:*
MMAR_0327|M.marinum_M KMGQGIERHIAG-GQAADWLGYFMLLASFILGATVGGTISLVVSGTQMLA
MAV_5184|M.avium_104 KMGQGIERHIAG-GTAADWLGYFLLFASFVVGATVGGFISLFVNGTSMLV
Mb0133|M.bovis_AF2122/97 KMGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLA
Rv0128|M.tuberculosis_H37Rv KMGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLA
MAB_3210c|M.abscessus_ATCC_199 KLGQGIERHLFGRGSVFEWLGYAMLYLSFVLGAATGGVIASVYSGSKVIL
MSMEG_0145|M.smegmatis_MC2_155 GLG--FDSRLAG-GTGEREKLRYAVVATMCLGAVIGATLSRFTVAP-VIA
TH_2076|M.thermoresistible__bu GIG--FDSRLAG-GTGKREKLRYTVVLTMLGGAMVGATMTLVTVAP-VIA
:* :: :: * * : :: ** *. :: . .. ::
MMAR_0327|M.marinum_M VASTVCALTTGFTYFHSDRRALLK--------------------------
MAV_5184|M.avium_104 AATVMCALTTGYTYFHSDRRALLDEA------------------------
Mb0133|M.bovis_AF2122/97 VAAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTP
Rv0128|M.tuberculosis_H37Rv VAAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTP
MAB_3210c|M.abscessus_ATCC_199 TVGIICGATTLVTFFYSDRKTILG--------------------------
MSMEG_0145|M.smegmatis_MC2_155 LAAVVIATSACIFRFGR---------------------------------
TH_2076|M.thermoresistible__bu LAAAFVAVSAAIFWSGPSPTSENDL-------------------------
. . . ::
MMAR_0327|M.marinum_M -------
MAV_5184|M.avium_104 -------
Mb0133|M.bovis_AF2122/97 ATNYGSS
Rv0128|M.tuberculosis_H37Rv ATNYGSS
MAB_3210c|M.abscessus_ATCC_199 -------
MSMEG_0145|M.smegmatis_MC2_155 -------
TH_2076|M.thermoresistible__bu -------