For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PSEINNSETRLSWVLAVLAGVLGATAFTHSAGYFVTFMTGNAQRAMLGYFRGDVVLSVTAGVLIVCFVAG VVIASVCRRHFWVDHPHGPTVLTTFSLVAATLVDVIDEGWEENLLDFAPIMLVTFGIGALNTSFVKDGEV SVPLSYVTGTLVKMGQGIERHIAGGTAADWLGYFLLFASFVVGATVGGFISLFVNGTSMLVAATVMCALT TGYTYFHSDRRALLDEA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_5184 | - | - | 100% (228) | hypothetical protein MAV_5184 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0133 | - | 4e-94 | 72.69% (227) | transmembrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv0128 | - | 4e-94 | 72.69% (227) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3210c | - | 5e-62 | 51.98% (227) | hypothetical protein MAB_3210c |
M. marinum M | MMAR_0327 | - | 1e-106 | 81.78% (225) | hypothetical protein MMAR_0327 |
M. smegmatis MC2 155 | MSMEG_0145 | - | 4e-07 | 28.57% (203) | hypothetical protein MSMEG_0145 |
M. thermoresistible (build 8) | TH_2076 | - | 8e-05 | 26.07% (211) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb0133|M.bovis_AF2122/97 -------------------------------------MQREIYDGEARLS Rv0128|M.tuberculosis_H37Rv -------------------------------------MQREIYDGEARLS MAV_5184|M.avium_104 -------------------------------------MPSEINNSETRLS MMAR_0327|M.marinum_M -------------------------------------MRSDIFDSEARLS MAB_3210c|M.abscessus_ATCC_199 MNRKGRSATLESGPQGEIEIGSDKGAIAPLKGDDAVITREAAIGSEARLS MSMEG_0145|M.smegmatis_MC2_155 -----------------------------------MAIASPVSERLTVTA TH_2076|M.thermoresistible__bu -----------------------------------MAVASPVTPRLTVLA : : Mb0133|M.bovis_AF2122/97 WVLAALAG-ILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS Rv0128|M.tuberculosis_H37Rv WVLAALAG-ILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTAS MAV_5184|M.avium_104 WVLAVLAG-VLGATAFTHSAGYFVTFMTGNAQRAMLGYFRGDVVLSVTAG MMAR_0327|M.marinum_M WVLAVLAG-VLGATAFTHSAGYFVTFMTGNAQRAVLGYFRDDVWLSVTAG MAB_3210c|M.abscessus_ATCC_199 WLLSGLAG-MVGAVAFLHSAGYFVTFMTGNTERAVLTWFKVTDKQQVAGA MSMEG_0145|M.smegmatis_MC2_155 LLLLTVATGLVDAISVLVLGHVFVANMTGN-VIFLGFWFVPHSGVDLTAA TH_2076|M.thermoresistible__bu LLLMTFATGLVDAVSVLVLGHVFVANMTGN-VIFLGFWFVPTSGVDLTAA :* .* ::.* :. . **: **** : * .::.. Mb0133|M.bovis_AF2122/97 ------LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDI Rv0128|M.tuberculosis_H37Rv ------LLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDI MAV_5184|M.avium_104 ------VLIVCFVAGVVIASVCRRHFWVDHPHGPTVLTTFSLVAATLVDV MMAR_0327|M.marinum_M ------LLLVCFLVGVVVASVCRRHFWVDHPHGPTVLTTFSLVAATALDI MAB_3210c|M.abscessus_ATCC_199 GPIAAISMIGAFLFGVIVASYCRRKFWKNHPHGATVLTTVGLLAAAAVDF MSMEG_0145|M.smegmatis_MC2_155 -----VVAFPAFVVGTIIGGRLARHLDGQVRTWLTTALGVEVVLLTVLSI TH_2076|M.thermoresistible__bu -----VVAFLAFLVGTVIGGRLARHLAHHVRGWITSALCVETVLLLALSA : *: *.::.. *:: * . : :. Mb0133|M.bovis_AF2122/97 MLG-GWHESM--LDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLV Rv0128|M.tuberculosis_H37Rv MLG-GWHESM--LDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLV MAV_5184|M.avium_104 IDE-GWEENL--LDFAPIMLVTFGIGALNTSFVKDGEVSVPLSYVTGTLV MMAR_0327|M.marinum_M VIG-GWEGSQ--LDFLPIMLVVFGVGSLNTSFVKDGEVSVPLSYVTGTLV MAB_3210c|M.abscessus_ATCC_199 YQDRSFTANID-VHFTPILLLAFSIGALNTSFVKKGETAIPLSYVTGTVV MSMEG_0145|M.smegmatis_MC2_155 LAGTGVLDYQDNTKLFLIAGLAITFGIQNATARQFGIQELSTTVLTSTIV TH_2076|M.thermoresistible__bu LAGAGWLDYHNDQKFILIAGLAVAFGLQNASARRFGIQELSTTVLTSTIV . .: * :.. .* *:: : * :. : :*.*:* Mb0133|M.bovis_AF2122/97 KMGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLA Rv0128|M.tuberculosis_H37Rv KMGQGIERHLAG-GKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLA MAV_5184|M.avium_104 KMGQGIERHIAG-GTAADWLGYFLLFASFVVGATVGGFISLFVNGTSMLV MMAR_0327|M.marinum_M KMGQGIERHIAG-GQAADWLGYFMLLASFILGATVGGTISLVVSGTQMLA MAB_3210c|M.abscessus_ATCC_199 KLGQGIERHLFGRGSVFEWLGYAMLYLSFVLGAATGGVIASVYSGSKVIL MSMEG_0145|M.smegmatis_MC2_155 GLG--FDSRLAG-GTGEREKLRYAVVATMCLGAVIGATLSRFTVAP-VIA TH_2076|M.thermoresistible__bu GIG--FDSRLAG-GTGKREKLRYTVVLTMLGGAMVGATMTLVTVAP-VIA :* :: :: * * : :: ** *. :: . .. :: Mb0133|M.bovis_AF2122/97 VAAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTP Rv0128|M.tuberculosis_H37Rv VAAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTP MAV_5184|M.avium_104 AATVMCALTTGYTYFHSDRRALLDEA------------------------ MMAR_0327|M.marinum_M VASTVCALTTGFTYFHSDRRALLK-------------------------- MAB_3210c|M.abscessus_ATCC_199 TVGIICGATTLVTFFYSDRKTILG-------------------------- MSMEG_0145|M.smegmatis_MC2_155 LAAVVIATSACIFRFGR--------------------------------- TH_2076|M.thermoresistible__bu LAAAFVAVSAAIFWSGPSPTSENDL------------------------- . . . :: Mb0133|M.bovis_AF2122/97 ATNYGSS Rv0128|M.tuberculosis_H37Rv ATNYGSS MAV_5184|M.avium_104 ------- MMAR_0327|M.marinum_M ------- MAB_3210c|M.abscessus_ATCC_199 ------- MSMEG_0145|M.smegmatis_MC2_155 ------- TH_2076|M.thermoresistible__bu -------