For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVLGFWDIAVPIVGAPMAGGPGTPALAAAVSNAGGLGFVAGGYRTADQFADDISAARAATTGPIGANIFV PQPSVADWLQLEYYAEELAEVAEYYHVEVGQPIHGDDDEWERKLEVVADIRPELVSFTFGAPPPDVVRQL SALGLLVSVTVTSAYEAGVAIAAGADNLVVQGPGAGGHRGTFAPDTEPGEESLHQLLDHIGHTHDVPLIA AGGLGTADEVAAVLRRGAVAAQVGTALLLADEAGTSSVHRVALKNPEFDSTLVTRAFSGRYARGLANNFT RLLDRVAPLGYPEVNQMTKPIRAAAIEADDPHGTNLWAGTAYRAAQAGPAADIVAALAPDVWSL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1927 | - | - | 100% (344) | hypothetical protein MMAR_1927 |
M. marinum M | MMAR_2787 | - | 7e-18 | 25.56% (313) | hypothetical protein MMAR_2787 |
M. marinum M | MMAR_5042 | - | 5e-17 | 27.80% (295) | 2-nitropropane dioxygenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2804c | - | 1e-173 | 85.13% (343) | alanine rich oxidoreductase |
M. gilvum PYR-GCK | Mflv_2277 | - | 2e-91 | 51.80% (334) | 2-nitropropane dioxygenase, NPD |
M. tuberculosis H37Rv | Rv2781c | - | 1e-173 | 85.13% (343) | alanine rich oxidoreductase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1641 | - | 1e-61 | 42.22% (334) | putative oxidoreductase |
M. avium 104 | MAV_3673 | - | 1e-148 | 76.04% (338) | dioxygenase |
M. smegmatis MC2 155 | MSMEG_4971 | - | 1e-103 | 56.89% (341) | oxidoreductase |
M. thermoresistible (build 8) | TH_1530 | - | 3e-38 | 58.59% (128) | POSSIBLE ALANINE RICH OXIDOREDUCTASE |
M. ulcerans Agy99 | MUL_2153 | - | 0.0 | 99.42% (344) | hypothetical protein MUL_2153 |
M. vanbaalenii PYR-1 | Mvan_4389 | - | 3e-97 | 54.38% (331) | 2-nitropropane dioxygenase, NPD |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1927|M.marinum_M --MVLGFWDIAVPIVGAPMAGGPGTPALAAAVSNAGGLGFVAGGYRTADQ MUL_2153|M.ulcerans_Agy99 --MVLGFWDIAVPIVGAPMAGGPGTPALAAAVSNAGGLGFVAGGYRTADQ Mb2804c|M.bovis_AF2122/97 --MVLGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAGGYLSADR Rv2781c|M.tuberculosis_H37Rv --MVLGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAGGYLSADR MAV_3673|M.avium_104 --MVLGFWDITVPIVGAPMAGGPGTPALAAAVSNAGGLGFVPGGYVSAEQ Mflv_2277|M.gilvum_PYR-GCK MP--FDLRELTVPVLVAPMAGGPSTPELAAAGSAAGGLGFVAAGYLTADM Mvan_4389|M.vanbaalenii_PYR-1 MS--FDVRDLSVPVLVAPMAGGPSTPELAAAGTNAGGLGFVAAGYLTADV MSMEG_4971|M.smegmatis_MC2_155 MMGDFDLRGLTRPVIVAPMAGGPSTPALAAAGSNAGGLGFIAAGYLTADA TH_1530|M.thermoresistible__bu -------------------------------------------------- MAB_1641|M.abscessus_ATCC_1997 --MSTVLAGLRLPVVGAPMAGGITVPALARGVSAAGGFGLLPAGYRTITQ MMAR_1927|M.marinum_M FADDISAARAATTGPIGANIFVPQPSVADWLQLEYYAEELAEVAEYYHVE MUL_2153|M.ulcerans_Agy99 FADDISAARAATTGPIGANIFVPQPSVADWLQLEYYAEELAEVAEYYHVE Mb2804c|M.bovis_AF2122/97 LADDIAAARAATTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTE Rv2781c|M.tuberculosis_H37Rv LADDIAAARAATTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTE MAV_3673|M.avium_104 FADDIAAARKATTGPLGVNLFVPQPSVADWVALDYYAAELEEIAEHYQVE Mflv_2277|M.gilvum_PYR-GCK FAEKLSAAMTLTREPVGANLFVPQPSAAMPDEIAAYARALAPEAQRYGVA Mvan_4389|M.vanbaalenii_PYR-1 FAERVRAAQRLTSGPLGVNLFVPQPSAGTPAAVAAYAERLAEEARRYGTE MSMEG_4971|M.smegmatis_MC2_155 LAERIKATRELTSEPIGVNLFAPQPSAGTPEQIAAYAQALAGEAERYGVA TH_1530|M.thermoresistible__bu -------------------------------------------------- MAB_1641|M.abscessus_ATCC_1997 LEQDREAMGEL---PFGFNVFVPTPDQG--ADLREYLDKLKVWADKLEVA MMAR_1927|M.marinum_M VGQPIHGDDDEWERKLEVVADIRPELVSFTFGAPPPDVVRQLSALGLLVS MUL_2153|M.ulcerans_Agy99 VGQPIHGDDDEWERKLEVVADIRPELVSFTFGAPPPDVVRQLSALGLLVS Mb2804c|M.bovis_AF2122/97 VGQPVYGDDDDWVRKLEVVADVRPEVVSFTFGAPPPDVVQRLSALGLLVS Rv2781c|M.tuberculosis_H37Rv VGQPVYGDDDDWVRKLEVVADVRPEVVSFTFGAPPPDVVQRLSALGLLVS MAV_3673|M.avium_104 VGHPRYGDDDGWEQKLEVVADVRPELVSFTFGVPPPDVIRRLGALGLLVM Mflv_2277|M.gilvum_PYR-GCK VGEPKF-DDDDWAAKIEVLLDLRPAVVSFTFGLPSAEERRRLTGAGITTV Mvan_4389|M.vanbaalenii_PYR-1 LGAPRF-DDDHWNAKLEVVLDLRPALASFTFGLPTVEERRRLSAAGIATA MSMEG_4971|M.smegmatis_MC2_155 LGEPRY-DDDAWAAKLDVVADLRPEVVSFTFGLPDDDEVKRLRQAGITTV TH_1530|M.thermoresistible__bu -------------------------------------------------- MAB_1641|M.abscessus_ATCC_1997 PGDPVW-HDDAYADKIEYLVANPVPVVSFTFGVPTAPDAHRLREAGSEVW MMAR_1927|M.marinum_M VTVTSAYEAGVAIAAGADNLVVQGPGAGGHRGTFAPDTEPGEESLHQLLD MUL_2153|M.ulcerans_Agy99 VTVTSAYEAGVAIAAGADNLVVQGPGAGGHRGTFAPDTEPGEESLHQLLD Mb2804c|M.bovis_AF2122/97 ITVTSVYEAGVAIAAGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLD Rv2781c|M.tuberculosis_H37Rv ITVTSVYEAGVAIAAGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLD MAV_3673|M.avium_104 VTVTSAYEAGVAVAAGADSLVVQGPAAGGHRGTFAPDMEPANESLHQLID Mflv_2277|M.gilvum_PYR-GCK GTVTTVAEARAAADVGVDVLTVQGPSAGGHRGTFDATARPSDIALDDLIA Mvan_4389|M.vanbaalenii_PYR-1 ATVTTPAEARLAADCGVDILVAQGPSAGGHRGTFDPTATPSGQPLDELLA MSMEG_4971|M.smegmatis_MC2_155 ATVTSYDEAEQADGRGVDALAVQGPNAGGHRGTFDPAAAPATQSLEELLD TH_1530|M.thermoresistible__bu -------------------------------------------------- MAB_1641|M.abscessus_ATCC_1997 ITVTSAAEAKIAEGIGADALVVQGPEAGGHRSSFDAGAP--DEPLLDLIA MMAR_1927|M.marinum_M HIGHTHDVPLIAAGGLGTADEVAAVLRRGAVAAQVGTALLLADEAGTSSV MUL_2153|M.ulcerans_Agy99 HIGHTHDVPLIGAGGLGTADEVAAVLRRGAVAAQVGTALLLADEAGTSSV Mb2804c|M.bovis_AF2122/97 RIGSAHDVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAA Rv2781c|M.tuberculosis_H37Rv RIGSAHDVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAA MAV_3673|M.avium_104 RIRHTHDIPIIAAGGLGTADEVGAALRRGAVAAQVGTALLLADEAGTNAA Mflv_2277|M.gilvum_PYR-GCK RVTAAVGLPVVAAGGIMDAADIRRVRDAGAVAAQLGTAFLLADEAGSTPV Mvan_4389|M.vanbaalenii_PYR-1 AVTADHAIPVVAAGGLMTATDIRRVRQAGAAAAQLGTAFLLSDEAGSSPV MSMEG_4971|M.smegmatis_MC2_155 DVVAAMDMPVIAAGGLVTADDVAGVLAAGAVAAQLGTAFLLAEEAGSSDV TH_1530|M.thermoresistible__bu ---------------LVTAXGVAGAISAGAVAVQAGTAFLLADEAGTGPT MAB_1641|M.abscessus_ATCC_1997 SVRSVTALPVVAAGGIMDGADIARVLAAGAAAAQLGTALVVTDESGAKQV : . : . ** *.* ***:::::*:*: . MMAR_1927|M.marinum_M HRVALKNPEFDSTLVTRAFSGRYARGLANNFTRLLDRVAPLGYPEVNQMT MUL_2153|M.ulcerans_Agy99 HRVALKNPEFDSTLVTRAFSGRYARGLANNFTRLLDRVAPLGYPEVNQMT Mb2804c|M.bovis_AF2122/97 HRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAPLGYPEVHQMT Rv2781c|M.tuberculosis_H37Rv HRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAPLGYPEVHQMT MAV_3673|M.avium_104 HRTALKNPLFAT-----------ARGLENDFTRMLDHVAPLGYPEVNQMT Mflv_2277|M.gilvum_PYR-GCK HRAALQSSQFTETVVTRAFSGRYARGLRNRFIIEHESQAPFGYPEVHYLT Mvan_4389|M.vanbaalenii_PYR-1 HRAALIDPQFTETAVTKAFSGRYARGLRNRFIVEHEAEAPFGYPEVHYLT MSMEG_4971|M.smegmatis_MC2_155 HRAALQNPEFTETVVTRAFSGRYARGLRNRFVVDHEAQAPFGYPEVHYLT TH_1530|M.thermoresistible__bu QRAALRDPQFTETALTRAFSGRYARGLRNRFIDEHEDAAPFGYPQVHHLT MAB_1641|M.abscessus_ATCC_1997 YKDALLQP--ADTVVTRVFSGRPARSISNAFQRDMEAVAPVSFPALNSAT : ** .. **.: * * : **..:* :: * MMAR_1927|M.marinum_M KPIRAAAIEADDPHGTNLWAGTAYRAAQAGPAADIVAALAPDVWSL-- MUL_2153|M.ulcerans_Agy99 KPIRAAAIEADDPHGTNLWAGTAYRAAQAGPAADIVAALAPNVWSL-- Mb2804c|M.bovis_AF2122/97 KPIRAAAVQADDPHGTNLWAGSAHRKTRPGPAADIIASLTPDVCSA-- Rv2781c|M.tuberculosis_H37Rv KPIRAAAVQADDPHGTNLWAGSAHRKTRPGPAADIIASLTPDVCSA-- MAV_3673|M.avium_104 TPIVEAAAAIEDPNGIPLWAGAAFKHASAGPAADIIAGLAATG----- Mflv_2277|M.gilvum_PYR-GCK SPLRKASANAGDPGAVNIWAGTGFRRARTGSVADIVGSLVGDG----- Mvan_4389|M.vanbaalenii_PYR-1 SPLRAAAVRAGDPQAVNIWAGTGFRQAGGGSVRDIMDTLIGRD----- MSMEG_4971|M.smegmatis_MC2_155 SPVRKASVAAGDPHATNIWAGTGFRAIGPGTVAEIMGRLVP------- TH_1530|M.thermoresistible__bu SPVRAAAARAGDPHGTNVWAGTGYRSITAGPAADILTGLAAELPARS- MAB_1641|M.abscessus_ATCC_1997 KELRAS----GDPDVMSLWAGTEHHRARALPVAELMATLATELSAAQG . : : ** :***: .: .. ::: *