For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRRDDVQGRPAVDTRIPESMAARLQRAQSWAIGSDPGLLRLRMATRTTAALGCSLLVLYLLTMATGQPLT VALIGVVITMIAARSVDDPDSRQQQITMALLPVPAALSISVAALLAPHLIAAEVAFVVIVFAAVYVRRFG PRGRALGMVAFMAYFFSLYLRAGVAQLPWMIGAVLVGTLCTFVMSTYVLPDRPESVLRATIRSLRARMAI VVDTAADTVRAGRLDERRRRRMRARIARLNETALLVQSQIEDKTHPATLWPGISAEQLAPWLFDAELSVE WVAIAGHRAMAIAEEIPAATRIELADTLTQLAWAIRGPRTEGLHQAASRAQRLLDGQPAPAPTDDPSQGA VRRLGLAIVAAATATSEVRELIGDATAAPPDPDNNDVVQPVPEDTAADGGPGEAGLAPTTRQAIQVSIAA SLAIVTGELVSPLHWYWAVIAAFVVFAGTNSWGETLTKGWQRLLGTVLGVPCGVLVATVVAGDKVFSVVM IFACLFFAVYFMQVTYSLMTFWITTMLALLYGLLGKFTFGVLMLRIEETAIGAVIGVAVAILVLPTTIGT VVRRDTRAFLTTLSELIEISIATMFDDDVTDSPTERARELDRDLQQFRVTAKPMLAGVAGFAGRRSIQHS VRLLTICDRYARILARRSEQYLDPGCPHGLSDAITTAAAQIRRNIDALVTALDGTQDVAITPAADSLDAA EAVVRQHADALDRADPGSNPRHLLAAVNSLRRIEGAVVNAAVHFGADADLMAHDQPG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_0945 | - | - | 100% (758) | hypothetical protein MMAR_0945 |
M. marinum M | MMAR_1191 | sugI | 5e-05 | 26.99% (163) | sugar-transport integral membrane protein SugI |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0746 | - | 6e-12 | 22.28% (561) | membrane protein-like protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | MLBr_02288 | - | 3e-12 | 53.23% (62) | hypothetical protein MLBr_02288 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_4566 | - | 0.0 | 65.84% (726) | hypothetical protein MAV_4566 |
M. smegmatis MC2 155 | MSMEG_0090 | - | 1e-11 | 21.83% (623) | hypothetical protein MSMEG_0090 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1444 | sugI | 1e-05 | 27.61% (163) | sugar-transport integral membrane protein SugI |
M. vanbaalenii PYR-1 | Mvan_0100 | - | 1e-13 | 21.76% (703) | membrane protein-like protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0746|M.gilvum_PYR-GCK --------------------MLSLRQRVADRVAQRDPDRDALRRAVRAAV Mvan_0100|M.vanbaalenii_PYR-1 ----------------MAAAPHELRHRLVRRVAQRDPDNDALRRALRAAA MSMEG_0090|M.smegmatis_MC2_155 ----------------MLLTPAKLWRRAAERLRERDPEYDALRRAARAGV MMAR_0945|M.marinum_M MSRRDDVQGRPAVDTRIPESMAARLQRAQSWAIGSDPGLLRLRMATRTTA MAV_4566|M.avium_104 -------------------------------MIGSDPGLLRLRMATRTTA MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 --------------------------MQRGILVALTAASVGLIYGYDLSI Mflv_0746|M.gilvum_PYR-GCK VVPAAGAVSFAVAGGSTQTPLFTIFGAVALLVFSDFPGNRQNR--AVAYG Mvan_0100|M.vanbaalenii_PYR-1 VVPLAAALSFALAGGSAQTPLFTIFGSTALLVFSDFPGNRQNR--AVAYA MSMEG_0090|M.smegmatis_MC2_155 VLPIAAAIGFAVGGGS-QTPLFSIFGAVSLLITADFPGNRPAR--ALAFA MMAR_0945|M.marinum_M ALGCSLLVLYLLTMATGQPLTVALIGVVITMIAARSVDDPDSRQQQITMA MAV_4566|M.avium_104 ALGLSLLALWLLTRATGQPLTVALLGVVITMVASRSVNEPDPRQQRITMA MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 IAGAQLFITEEFGLSTHQQELLTTMVVIGQIVG------------ALGAG Mflv_0746|M.gilvum_PYR-GCK GLGLNGFLLITLGTLVAPYPWPAVAAMFVIGVAVTFSGVLSETLAAGQRA Mvan_0100|M.vanbaalenii_PYR-1 GLGFNGFVLITLGTLVAPHPWPAVAVMFALGVVVTFSGVLSETIAAGQRA MSMEG_0090|M.smegmatis_MC2_155 GLAFNGAVLIVLGTLIAPHVWLSVVSMFVIGVVVSFSGVLSEVVAAGQRA MMAR_0945|M.marinum_M LLPVPAALSISVAALLAPHLIAAEVAFVVIVFAAVYVRRFGPRGRALGMV MAV_4566|M.avium_104 LLPVPAAVAITAAAVLAPHPVAGDVVFVLIVFAAAYIRRFGARGRALGMV MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 VLANAIGRKKSVVMLLVAYTMFAVLGALSVSLPMLLAARFLLGLAVGVSI Mflv_0746|M.gilvum_PYR-GCK TLLTFVLPACTPPGPVAERLLG--WTIALAVCVPAALFLLPPRHHGQLRR Mvan_0100|M.vanbaalenii_PYR-1 TLLTFVLPACTPAGPVGERLLG--WAIALAVCVPAALFVLPPRHHGQLRR MSMEG_0090|M.smegmatis_MC2_155 TLLLFVLPLCTPVGPIADRLLG--WVIALVVCVPAALFLFPPRHHDELRR MMAR_0945|M.marinum_M AFMAYFFSLYLRAGVAQLPWMIGAVLVGTLCTFVMSTYVLPDRPESVLRA MAV_4566|M.avium_104 AFMSYFFTLYLRARVSELPWMIGAVAVGTVCTYVMTSHVLPDRPERVLRA MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 VVVPVYVAESAPAAVRGS------LLTVYQLTTVSGLIVGYLTGYLLAGT Mflv_0746|M.gilvum_PYR-GCK RAARACTALADRLDGTVTPDDVQRAMDALRKTFLGADFRPVGLTAGSRAL Mvan_0100|M.vanbaalenii_PYR-1 RAARACRALADRLDGSATPADVQRAMDALRATFLGADFRPVGLTAGSRAL MSMEG_0090|M.smegmatis_MC2_155 TAARVCRVLAYRLEGSASARDVNRAMNELYESFLGADYRPVALTAGSRAL MMAR_0945|M.marinum_M TIRSLRARMAIVVDTAADTVRAGRLDERRRRRMRARIARLNETALLVQSQ MAV_4566|M.avium_104 TIRALRARMAIVIDTTAEAVRTGRLDERRRRRMRARTVRLNETALMVQSQ MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 HSWRWMLGLATVPAMLLLPLLIRMPDTPRWYVMKGRIQEARAALLRVDPA Mflv_0746|M.gilvum_PYR-GCK VRVVDDLEWVADRTGRGTGVTLRDK-DAVVRVLRASAAVLSISRPADREM Mvan_0100|M.vanbaalenii_PYR-1 VRVVDDLEWVADRVGRNTGVALRDK-DAVVRVLRCAAAVLQISRPADRDA MSMEG_0090|M.smegmatis_MC2_155 VRVVDDLGWISDRVTDSTGEILGEMRDPVVRVLRDSAALLRIHDPARRAE MMAR_0945|M.marinum_M IEDKTHPATLWPGISAEQLAPWLFDAELSVEWVAIAGHRAMAIAEEIPAA MAV_4566|M.avium_104 IEDRADPGTLWPGVTAEQLAPWLLDAELAIEWVATAGRRAAALGAELPEA MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 ADVEEELAEIGTALSEGSGG--------------------------VSEM Mflv_0746|M.gilvum_PYR-GCK ARAELEGALLALRTLARGRWREDIDEILG-AADDEQAVAQGRDLLRRRTI Mvan_0100|M.vanbaalenii_PYR-1 ARADLEAALITLRTVARGRWRDDLDAILS-APDDAQAVDLGRDLLRRRTI MSMEG_0090|M.smegmatis_MC2_155 RSADLRAALEELRTVSQGTYREGIAAILG-TPDDADAVEVGKALLVRRTI MMAR_0945|M.marinum_M TRIELADTLTQLAWAIRGPRTEGLHQAASRAQRLLDGQPAPAPTDDPSQG MAV_4566|M.avium_104 VRAELVSALTQLGRAIRLPEPGGLRDAASRARRLLD----AATDDRPAGT MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 LRPPFLRATIFVITLGFLIQITGINAIIYYSPRIFEAMGFTGDFALLG-- Mflv_0746|M.gilvum_PYR-GCK AATVSATGRVIAAAAAADARPVWARALGLRLPPTGASDRLLPETVAAAKI Mvan_0100|M.vanbaalenii_PYR-1 AATIGATGRVISAAAAADARPVWARALGLRLPPTGASDRLLPETVAAAQI MSMEG_0090|M.smegmatis_MC2_155 AATVAVTGRVIRNAALADARPVWARVLGRRLPETGSADWIMPETTAVAEI MMAR_0945|M.marinum_M AVRRLGLAIVAAATATSEVRELIGDAT-AAPPDPDNND----VVQPVPED MAV_4566|M.avium_104 EVRRLALAIINAATATADVRAIVDGAAGAAVPDVAGSERPPAAAGVAAEE MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 ---LPALVQIAGVAAVITSLLLVDRVGRRPILLSGIAIMIVADVALMAVF Mflv_0746|M.gilvum_PYR-GCK TTG----FVENRSVAVRNSLRTGLGLALAVTVTHVFPVEHGFWVVLGALS Mvan_0100|M.vanbaalenii_PYR-1 TSG----FLANRSVAVRNSLRTGLGLALAVAVTHLFPVEHGFWVVLGALS MSMEG_0090|M.smegmatis_MC2_155 AKG----FLSTRAVVLRNSLRTGLGLALAVAVTHVFPVEHGFWVVLGAMS MMAR_0945|M.marinum_M TAADGGPGEAGLAPTTRQAIQVSIAASLAIVTGELVSPLHWYWAVIAAFV MAV_4566|M.avium_104 PAEQEEEQPAGLRPTTRQAIQVSVAASLAIITGELVSPARWYWAVIAAFV MLBr_02288|M.leprae_Br4923 --------------------------------------------MVAAFV MUL_1444|M.ulcerans_Agy99 ARG-------------QGAAILGFAGILLFIIGYTMGFGSLGWVYASESF . Mflv_0746|M.gilvum_PYR-GCK VLR--SSALTTGTRVWRAVVGTGIGFLLGALLISLVGVDPVVMWILMPLA Mvan_0100|M.vanbaalenii_PYR-1 VLR--SSALTTGTRVWRAVFGTAIGFLFGAVLISLVGVNPVLLWLLMPVV MSMEG_0090|M.smegmatis_MC2_155 VLR--SSALTTGTRVVRAVAGTALGFVIGAVLIELVGVQPVVLWILLPIV MMAR_0945|M.marinum_M VFAGTNSWGETLTKGWQRLLGTVLGVPCGVLVATVVAGDKVFSVVMIFAC MAV_4566|M.avium_104 IFAGTNSWGETLTKGWQRLLGTMLGVPAGVLVATLLTGHEAAALAGIFVC MLBr_02288|M.leprae_Br4923 ILAVTNSWGETLTRGWQQLLVNTVG----VLVTTLFSGNTTVSPAAIFVC MUL_1444|M.ulcerans_Agy99 PTR-LRSIGSSTMLTANLIANAIVAAVFLTMLHSLGGSGAFAVFGVLALV * : . : :. .:: : : Mflv_0746|M.gilvum_PYR-GCK VFGSAYVPEIASFIAAQAAFTMMVLISFNLIAPTGWEVGLIRVEDVFVGA Mvan_0100|M.vanbaalenii_PYR-1 VFGSAYVPEIASFTAAQAAFTMMVLIFFNLIAPTGWQVGLIRVEDVVMGT MSMEG_0090|M.smegmatis_MC2_155 AFGSAYVPEVASFIAGQAAFTMMVLINFNLIAPTGWQVGLIRIEDVVVGA MMAR_0945|M.marinum_M LFFAVYFMQVTYSLMTFWITTMLALL-YGLLGKFTFGVLMLRIEETAIGA MAV_4566|M.avium_104 LFCAFYFMTVTYSLMTFWITTMLALL-YGLLGQFSFGVLMLRIEETALGA MLBr_02288|M.leprae_Br4923 LFCAFYIYDGN-----------------------------LQPDARCMGN MUL_1444|M.ulcerans_Agy99 AFGVVYRYAPET-------------------------------KGRQLEE * * . : Mflv_0746|M.gilvum_PYR-GCK LVGVVVSVLLWPRGATASVTRAIDSARFVAARYLRAAVLRITRGAYEERT Mvan_0100|M.vanbaalenii_PYR-1 LVAAAVSMLLWPRGATASVTRAIDSARTVFATYLRTAVLRITRGASEART MSMEG_0090|M.smegmatis_MC2_155 LVGIVVSILLWPRGARASVTKAIDAARAAGAELLEAAVLRVTRGASEEAT MMAR_0945|M.marinum_M VIGVAVAILVLPTTIGTVVRRDTRAFLTTLSELIEISIATMFDDDVTDSP MAV_4566|M.avium_104 VIGATVAVVVLPTNTRTAIRADTRAFLTSLSALIEACAAAMSGG--AASP MLBr_02288|M.leprae_Br4923 T------------------------------------------------- MUL_1444|M.ulcerans_Agy99 IRHFWENGGRWPEKLTEAP------------------------------- Mflv_0746|M.gilvum_PYR-GCK NEVVTLGHAALDASRVVDDAVRHYLSESSGETDFR-------------AP Mvan_0100|M.vanbaalenii_PYR-1 DEVATRSHAALAASRVIDDAVRQYLSESSGETDFR-------------AP MSMEG_0090|M.smegmatis_MC2_155 DRVIALSHSALEASRTLDDTVRHYLSESGGPSDQR-------------AP MMAR_0945|M.marinum_M TERARELDRDLQQFRVTAKPMLAGVAGFAGRRSIQHSVRLLTICDRYARI MAV_4566|M.avium_104 SEQARQLDRDLQQFRVTAKPLLAGVAGLAGRRGIRRALRIFTACDRYGRA MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 -------------------------------------------------- Mflv_0746|M.gilvum_PYR-GCK VVRSSNRATRLRGAADLIADIPTPPPLGTYPKVRSVLEAHADAICARVSG Mvan_0100|M.vanbaalenii_PYR-1 IVRSFNRAIRLRGAADLVADIPTPPPLGTYPSVRAVVESHADAICERVAG MSMEG_0090|M.smegmatis_MC2_155 IVRSATRAIRVRAAAELIADV-VPPPLEAYQETRKTIEAHARIICARLTG MMAR_0945|M.marinum_M LARRSEQYLD-PGCPHGLSDAITTAAAQIRRNIDALVTALDGTQDVAITP MAV_4566|M.avium_104 LARSSEQYRGSPGPGPQLAQAFSAAAAQTRRNLDALLEAIDSGHPPTLVS MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 -------------------------------------------------- Mflv_0746|M.gilvum_PYR-GCK TSEPVGAWAPISEDFVRALRSEAPEDT----LGVAAALPLLTAAAALGEL Mvan_0100|M.vanbaalenii_PYR-1 RADPDHSWEPISDDFVRALRSEARGDD----LGLSAALPLLTAAAALGEL MSMEG_0090|M.smegmatis_MC2_155 -EDTTSVFVPIGETFVLALRAEATGGD----LAVSAALPLVTVAAHIGEL MMAR_0945|M.marinum_M AADSLDAAEAVVRQHADALDRADPGSNPRHLLAAVNSLRRIEGAVVNAAV MAV_4566|M.avium_104 AADELDAAETAARQHDSDGD-GETRPDVRRFLTAVHALRQIERAVISTAT MLBr_02288|M.leprae_Br4923 -------------------------------------------------- MUL_1444|M.ulcerans_Agy99 -------------------------------------------------- Mflv_0746|M.gilvum_PYR-GCK ELIYPWDTGPS----- Mvan_0100|M.vanbaalenii_PYR-1 ELIYPRPATG------ MSMEG_0090|M.smegmatis_MC2_155 ELLYPQPVESVH---- MMAR_0945|M.marinum_M HFGADADLMAHDQPG- MAV_4566|M.avium_104 NLGGREDVRTATAAPR MLBr_02288|M.leprae_Br4923 ---------------- MUL_1444|M.ulcerans_Agy99 ----------------