For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIPVTSVVRRMWLLLAVMGVALVAGLGIYRLHRVFGVHEQPVVQAAADTDVPQFNPKYVTYEVYGPAPSA RIAYLDPDAHVRQLSDVPLPWSQTVSTSLPAVSVNLLAQSNAEELSCRILVNGAVKDQRSVSRPKALTFC QVTSA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_0839 | - | - | 100% (145) | MmpS-family membrane protein |
| M. marinum M | MMAR_0774 | - | 8e-33 | 43.45% (145) | hypothetical protein MMAR_0774 |
| M. marinum M | MMAR_3743 | mmpS5_1 | 1e-32 | 46.21% (145) | membrane protein MmpS5_1 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0518 | mmpS2 | 2e-54 | 68.75% (144) | membrane protein |
| M. gilvum PYR-GCK | Mflv_3028 | - | 8e-23 | 37.32% (142) | membrane family protein |
| M. tuberculosis H37Rv | Rv0506 | mmpS2 | 2e-54 | 68.75% (144) | membrane protein |
| M. leprae Br4923 | MLBr_02377 | - | 1e-23 | 35.81% (148) | hypothetical protein MLBr_02377 |
| M. abscessus ATCC 19977 | MAB_4383c | - | 4e-25 | 41.01% (139) | putative membrane protein, MmpS |
| M. avium 104 | MAV_3864 | - | 1e-28 | 42.66% (143) | MmpS4 protein |
| M. smegmatis MC2 155 | MSMEG_0575 | - | 2e-27 | 44.29% (140) | MmpS1 protein |
| M. thermoresistible (build 8) | TH_2866 | - | 5e-23 | 34.31% (137) | PUTATIVE hypothetical protein Mvan_3834 |
| M. ulcerans Agy99 | MUL_3687 | mmpS5_1 | 2e-29 | 43.57% (140) | membrane protein MmpS5_1 |
| M. vanbaalenii PYR-1 | Mvan_1058 | - | 3e-25 | 38.57% (140) | hypothetical protein Mvan_1058 |
CLUSTAL 2.0.9 multiple sequence alignment
MLBr_02377|M.leprae_Br4923 MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRES
MAV_3864|M.avium_104 ------MKGFSIASLVKRGWMVLVVVVVVGVAGFCVYRLHGIFGSHNNTS
TH_2866|M.thermoresistible__bu -LWTSKAKDSAILTRLARAWIPLVMVVVVAIGGFAVWRIRGIFGSEQLPT
MSMEG_0575|M.smegmatis_MC2_155 --------------MLKQAWIPLVLAVVLPVSGLVVWRLHEKFGSEDLNA
MUL_3687|M.ulcerans_Agy99 --------------MLKRAWIPLLMVVVLAISGFVVSRLHKIFGSEDLNA
Mflv_3028|M.gilvum_PYR-GCK -----------MITVVKRVWLPVLIVVALAIGFVSISYLRSVFGSNGAVV
Mvan_1058|M.vanbaalenii_PYR-1 -----------MITVVKRVWLPVLVIAAVAVGAVTVANLRSVFGSDKAIV
MAB_4383c|M.abscessus_ATCC_199 -----------MIRVAKRVWLPMLVVAAVAIGSITVMHLRTNFGATPFVV
Mb0518|M.bovis_AF2122/97 ------MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPT
Rv0506|M.tuberculosis_H37Rv ------MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPT
MMAR_0839|M.marinum_M --------MIPVTSVVRRMWLLLAVMGVALVAGLGIYRLHRVFGVHEQPV
: *: : : . :. . : :: *.
MLBr_02377|M.leprae_Br4923 YADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPW
MAV_3864|M.avium_104 AAGGISDQTEPFSPKHITLEVFGNPGAVATINYVDINVQPRQVLNAALPW
TH_2866|M.thermoresistible__bu YAGSTSVDTDKANPKRVRYEIFGAPGTVADINYIDAEGDPHQVNGATLPW
MSMEG_0575|M.smegmatis_MC2_155 NAG-AGIEIVQFNPKILVYEVYGPPGSTAQISYFDTDANVHSVNTT-LPW
MUL_3687|M.ulcerans_Agy99 NAG-AGIDIVQFNPKVVIYEISGPAGSTANINFWDADANTHQVNAAPLPW
Mflv_3028|M.gilvum_PYR-GCK TPV-GSDTAEDFNPTVVTYEVFGT-GSFAVINYTDLDGLPQRTGQVSLPW
Mvan_1058|M.vanbaalenii_PYR-1 TPV-DADTAENFNPKVVTYEIFGS-GSTATINYADLDGKPQRTGEVSLPW
MAB_4383c|M.abscessus_ATCC_199 TPR-NSDTAERFNPKVVTYEVFGS-AATAVINYRDLNAIPQRVSEVPLPW
Mb0518|M.bovis_AF2122/97 VMVKPDFDVPLFNPKRVTYEVFGP-AKTAKIAYLDPDARVHRLDSVSLPW
Rv0506|M.tuberculosis_H37Rv VMVKPDFDVPLFNPKRVTYEVFGP-AKTAKIAYLDPDARVHRLDSVSLPW
MMAR_0839|M.marinum_M VQAAADTDVPQFNPKYVTYEVYGP-APSARIAYLDPDAHVRQLSDVPLPW
.*. : *: * . * * : * : : . ***
MLBr_02377|M.leprae_Br4923 SLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCL
MAV_3864|M.avium_104 SLTMVTTQPGAFSNLVAQGNSDSLGCRITVDGDVKDERIVNQVNAYTFCL
TH_2866|M.thermoresistible__bu SIEIVTNSPAMAGNVLAQGDSDFIGCRIVSDGVVKDERTTQRVSAYVYCF
MSMEG_0575|M.smegmatis_MC2_155 SVTLSTTLPTVSANLMALGSNDEIGCRVTVNGIVREEKSANGIDAQTYCL
MUL_3687|M.ulcerans_Agy99 SFTISTTLPSVSANIMAQGDGSQIGCRITVDGVVREEKSAAGVNPQTFCL
Mflv_3028|M.gilvum_PYR-GCK TLTLETTIPSVRPDLLAQGNGQFIGCRVTVDGEVEDERTAEGVNAATYCL
Mvan_1058|M.vanbaalenii_PYR-1 SLTLETTLPSVMPNIMAQGDGQSITCRVTVDDEVKDERTAEGLNAATYCL
MAB_4383c|M.abscessus_ATCC_199 SLTLSTTLPSVMPTLFAQGDGQDIGCRITVDNDVKDERVVTGVNAETYCL
Mb0518|M.bovis_AF2122/97 SVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRALTSCQ
Rv0506|M.tuberculosis_H37Rv SVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRALTSCQ
MMAR_0839|M.marinum_M SQTVSTSLPAVSVNLLAQSNAEELSCRILVNGAVKDQRSVSRPKALTFCQ
: : *. . :.* .. . : **: :. *. :: . . *
MLBr_02377|M.leprae_Br4923 VKSA
MAV_3864|M.avium_104 VKSA
TH_2866|M.thermoresistible__bu TKSA
MSMEG_0575|M.smegmatis_MC2_155 VKSA
MUL_3687|M.ulcerans_Agy99 VKSA
Mflv_3028|M.gilvum_PYR-GCK VKAA
Mvan_1058|M.vanbaalenii_PYR-1 VKAA
MAB_4383c|M.abscessus_ATCC_199 VKAA
Mb0518|M.bovis_AF2122/97 VSSG
Rv0506|M.tuberculosis_H37Rv VSSG
MMAR_0839|M.marinum_M VTSA
..:.