For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPNISVLNALKRTWIALVILAVVVIAAFSVNRLRSYFGVHDDRPLTSGVSDDIKPFNPKHVVYEVFGPPG TVANINYLDIEAQPQRVSGVTLPWTLAVTTTLPSVSVNVVAQGDTDQIGCRIIVNGEVKDERSENEVNAQ TFCLVKSA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_0774 | - | - | 100% (148) | hypothetical protein MMAR_0774 |
| M. marinum M | MMAR_0772 | mmpS4_2 | 7e-43 | 58.27% (139) | membrane protein MmpS4_2 |
| M. marinum M | MMAR_0095 | mmpS5_3 | 3e-42 | 53.10% (145) | membrane protein MmpS5_3 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1582 | mmpS6 | 1e-47 | 60.81% (148) | membrane protein |
| M. gilvum PYR-GCK | Mflv_3434 | - | 5e-35 | 50.00% (138) | membrane family protein |
| M. tuberculosis H37Rv | Rv0451c | mmpS4 | 9e-44 | 57.14% (140) | membrane protein |
| M. leprae Br4923 | MLBr_02377 | - | 9e-44 | 57.24% (145) | hypothetical protein MLBr_02377 |
| M. abscessus ATCC 19977 | MAB_3149 | - | 4e-37 | 49.65% (143) | MmpS family protein |
| M. avium 104 | MAV_3864 | - | 9e-43 | 52.03% (148) | MmpS4 protein |
| M. smegmatis MC2 155 | MSMEG_0226 | - | 2e-46 | 59.86% (142) | MmpS5 protein |
| M. thermoresistible (build 8) | TH_0185 | mmpS5 | 8e-38 | 48.95% (143) | POSSIBLE CONSERVED MEMBRANE PROTEIN MMPS5 |
| M. ulcerans Agy99 | MUL_1935 | - | 2e-38 | 57.25% (131) | hypothetical protein MUL_1935 |
| M. vanbaalenii PYR-1 | Mvan_3188 | - | 2e-34 | 48.25% (143) | hypothetical protein Mvan_3188 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1582|M.bovis_AF2122/97 ------MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTS
MUL_1935|M.ulcerans_Agy99 --------------------MMIVAVAVVVIAGFAIYRLHGIFGSHNNAS
MAV_3864|M.avium_104 ------MKGFSIASLVKRGWMVLVVVVVVGVAGFCVYRLHGIFGSHNNTS
MMAR_0774|M.marinum_M ------MPNISVLNALKRTWIALVILAVVVIAAFSVNRLRSYFGVHDDRP
Rv0451c|M.tuberculosis_H37Rv --------------MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPS
MLBr_02377|M.leprae_Br4923 MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRES
Mflv_3434|M.gilvum_PYR-GCK -----------MIAIGKKVWLPLLIVVVVVIAGATVSRIRTFFGSEGIIE
Mvan_3188|M.vanbaalenii_PYR-1 -----------MIAIAKKVWLPLLIVVVVAIAGLTVARIRTFFGAEGIIE
MSMEG_0226|M.smegmatis_MC2_155 ------------MKLLKRFWIPLLIGVVVLVGAFTVMRVRTFFGSGDDPS
TH_0185|M.thermoresistible__bu -----------MIKTLRRFWMPLLIAAVVAVGAFAVDRVRQIFAAESHIV
MAB_3149|M.abscessus_ATCC_1997 -----------MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGA
: :: .*: :.. : *:: *.
Mb1582|M.bovis_AF2122/97 TAGGVANDIKPFNPKQVTLEVFGAPGTVATINYLDVDATPRQVLDTTLPW
MUL_1935|M.ulcerans_Agy99 GANGISNEIVPFNPKQVVLDVFGAPGAVATINYLDVNAQPQQVVDAPLPW
MAV_3864|M.avium_104 AAGGISDQTEPFSPKHITLEVFGNPGAVATINYVDINVQPRQVLNAALPW
MMAR_0774|M.marinum_M LTSGVSDDIKPFNPKHVVYEVFGPPGTVANINYLDIEAQPQRVSGVTLPW
Rv0451c|M.tuberculosis_H37Rv YSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPW
MLBr_02377|M.leprae_Br4923 YADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPW
Mflv_3434|M.gilvum_PYR-GCK TPRNFADLPEPFDPKVVRYEIIGN-GSYADVNYLDLDAKPQRVDGAALPW
Mvan_3188|M.vanbaalenii_PYR-1 TPRNFADLPEPFDPKVVRYEITGS-GSYADVNYLDLDAKPQRVDGAALPW
MSMEG_0226|M.smegmatis_MC2_155 LASAKVDDTKPFDPKVVIYEIYGEPGATADVNYLDLDAQPQRVDGVSLPW
TH_0185|M.thermoresistible__bu TPIVFADDPEPFDPKVVTYEIFGTPGAVVDINYLDLDARTQRVNDVTLPW
MAB_3149|M.abscessus_ATCC_1997 SADNNAKDAVPYNPKTLVYEIFGEPGAMADVNYFNEDAQPTRVDNVQLPW
. *:.** : :: * *: . :.*.: : . :: .. ***
Mb1582|M.bovis_AF2122/97 SYTITTTLPAVFANVVAQGDSNSIGCRITVNGVVKDERIVNEVRAYTFCL
MUL_1935|M.ulcerans_Agy99 SFTITTTEPAVLGNMVAQGNGGTIGCRITVNGEVKDERIVNTPDAYTFCL
MAV_3864|M.avium_104 SLTMVTTQPGAFSNLVAQGNSDSLGCRITVDGDVKDERIVNQVNAYTFCL
MMAR_0774|M.marinum_M TLAVTTTLPSVSVNVVAQGDTDQIGCRIIVNGEVKDERSENEVNAQTFCL
Rv0451c|M.tuberculosis_H37Rv SLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCL
MLBr_02377|M.leprae_Br4923 SLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCL
Mflv_3434|M.gilvum_PYR-GCK SLTLETTEPSAAPNIVAQGDSSTITCRIFVDDELKDERTTDGLNAQTFCF
Mvan_3188|M.vanbaalenii_PYR-1 SLTLETTEPSAAPNIVAQGDGSTITCRIFVDDELKDERTTDGLNAQTFCF
MSMEG_0226|M.smegmatis_MC2_155 TLTLSTTAPSVFPNIVAQGNGDSITCRITVDDELKDERTSNGVNAQTFCL
TH_0185|M.thermoresistible__bu SITLSTTAPSALAHIVAQGNADHIGCRIIVDGELRVESVSTGVNAQTYCI
MAB_3149|M.abscessus_ATCC_1997 AFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVKMERVSTEHNAYIYCL
: : :. .. ::****: . : *** *:. :: * * :*:
Mb1582|M.bovis_AF2122/97 DKSS
MUL_1935|M.ulcerans_Agy99 DKSG
MAV_3864|M.avium_104 VKSA
MMAR_0774|M.marinum_M VKSA
Rv0451c|M.tuberculosis_H37Rv VKSA
MLBr_02377|M.leprae_Br4923 VKSA
Mflv_3434|M.gilvum_PYR-GCK VKSA
Mvan_3188|M.vanbaalenii_PYR-1 VKSA
MSMEG_0226|M.smegmatis_MC2_155 VKSA
TH_0185|M.thermoresistible__bu EKSA
MAB_3149|M.abscessus_ATCC_1997 VKSA
**.