For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRVTYEVFGPAK TAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRALT SCQVSSG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv0506 | mmpS2 | - | 100% (147) | PROBABLE CONSERVED MEMBRANE PROTEIN MMPS2 |
| M. tuberculosis H37Rv | Rv0677c | mmpS5 | 1e-26 | 42.25% (142) | hypothetical protein Rv0677c |
| M. tuberculosis H37Rv | Rv0403c | mmpS1 | 5e-26 | 42.14% (140) | membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0518 | mmpS2 | 4e-80 | 100.00% (147) | membrane protein |
| M. gilvum PYR-GCK | Mflv_3028 | - | 4e-25 | 43.80% (137) | membrane family protein |
| M. leprae Br4923 | MLBr_02377 | - | 5e-29 | 45.14% (144) | hypothetical protein MLBr_02377 |
| M. abscessus ATCC 19977 | MAB_3149 | - | 4e-25 | 39.13% (138) | MmpS family protein |
| M. marinum M | MMAR_0839 | - | 3e-54 | 68.75% (144) | MmpS-family membrane protein |
| M. avium 104 | MAV_3247 | - | 4e-29 | 43.48% (138) | MmpS4 protein |
| M. smegmatis MC2 155 | MSMEG_3495 | - | 6e-28 | 41.10% (146) | MmpS5 protein |
| M. thermoresistible (build 8) | TH_2866 | - | 6e-27 | 39.71% (136) | PUTATIVE hypothetical protein Mvan_3834 |
| M. ulcerans Agy99 | MUL_3687 | mmpS5_1 | 7e-28 | 44.20% (138) | membrane protein MmpS5_1 |
| M. vanbaalenii PYR-1 | Mvan_1058 | - | 3e-27 | 43.80% (137) | hypothetical protein Mvan_1058 |
CLUSTAL 2.0.9 multiple sequence alignment
TH_2866|M.thermoresistible__bu -----LWTSKAKDSAILTRLARAWIPLVMVVVVAIGGFAVWRIRGIFGSE
MUL_3687|M.ulcerans_Agy99 ------------------MLKRAWIPLLMVVVLAISGFVVSRLHKIFGSE
MLBr_02377|M.leprae_Br4923 ----MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASE
MAV_3247|M.avium_104 -------------------MKRLWIPLVIVAVVVAGGLTVSRLHGIFGSE
MAB_3149|M.abscessus_ATCC_1997 ---------------MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSE
Mflv_3028|M.gilvum_PYR-GCK ---------------MITVVKRVWLPVLIVVALAIGFVSISYLRSVFGS-
Mvan_1058|M.vanbaalenii_PYR-1 ---------------MITVVKRVWLPVLVIAAVAVGAVTVANLRSVFGS-
MSMEG_3495|M.smegmatis_MC2_155 MMAVDTKDKQRKKFSISALARRFWIPLLIGAVVFVGAFTVMRVRTFFGSG
Rv0506|M.tuberculosis_H37Rv ----------MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVH
Mb0518|M.bovis_AF2122/97 ----------MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVH
MMAR_0839|M.marinum_M ------------MIPVTSVVRRMWLLLAVMGVALVAGLGIYRLHRVFGVH
: *: : : . . . : :: *.
TH_2866|M.thermoresistible__bu QLPTYAGSTSVDTDKANPKRVRYEIFGAPGTVADINYIDAEGDPHQVNGA
MUL_3687|M.ulcerans_Agy99 DLNANAG-AGIDIVQFNPKVVIYEISGPAGSTANINFWDADANTHQVNAA
MLBr_02377|M.leprae_Br4923 KRESYADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGA
MAV_3247|M.avium_104 KRPSYADTRQQDTKPFNPKHVKYEVFGPAGAMADISYFDANGEPQHINGV
MAB_3149|M.abscessus_ATCC_1997 SFGASADNNAKDAVPYNPKTLVYEIFGEPGAMADVNYFNEDAQPTRVDNV
Mflv_3028|M.gilvum_PYR-GCK NGAVVTPVGSDTAEDFNPTVVTYEVFG-TGSFAVINYTDLDGLPQRTGQV
Mvan_1058|M.vanbaalenii_PYR-1 DKAIVTPVDADTAENFNPKVVTYEIFG-SGSTATINYADLDGKPQRTGEV
MSMEG_3495|M.smegmatis_MC2_155 DDPSLASAKVDDTKPFDPKVVVYEIYGEPGATADINYLDLDAQPQRVDGA
Rv0506|M.tuberculosis_H37Rv EQPTVMVKPDFDVPLFNPKRVTYEVFG-PAKTAKIAYLDPDARVHRLDSV
Mb0518|M.bovis_AF2122/97 EQPTVMVKPDFDVPLFNPKRVTYEVFG-PAKTAKIAYLDPDARVHRLDSV
MMAR_0839|M.marinum_M EQPVVQAAADTDVPQFNPKYVTYEVYG-PAPSARIAYLDPDAHVRQLSDV
. :*. : **: * .. * : : : :. : . .
TH_2866|M.thermoresistible__bu TLPWSIEIVTNSPAMAGNVLAQGDSDFIGCRIVSDGVVKDERTTQRVSAY
MUL_3687|M.ulcerans_Agy99 PLPWSFTISTTLPSVSANIMAQGDGSQIGCRITVDGVVREEKSAAGVNPQ
MLBr_02377|M.leprae_Br4923 QLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAY
MAV_3247|M.avium_104 ELPWTFDISTTLPSIVGNVVAQGNSDSLGCRILVDGVVKTERISHELNAF
MAB_3149|M.abscessus_ATCC_1997 QLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVKMERVSTEHNAY
Mflv_3028|M.gilvum_PYR-GCK SLPWTLTLETTIPSVRPDLLAQGNGQFIGCRVTVDGEVEDERTAEGVNAA
Mvan_1058|M.vanbaalenii_PYR-1 SLPWSLTLETTLPSVMPNIMAQGDGQSITCRVTVDDEVKDERTAEGLNAA
MSMEG_3495|M.smegmatis_MC2_155 TLPWSLTLSTTAPSVFPNIVAQGNGDTITCRITVDDELKDERTSNGVNAQ
Rv0506|M.tuberculosis_H37Rv SLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRAL
Mb0518|M.bovis_AF2122/97 SLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRAL
MMAR_0839|M.marinum_M PLPWSQTVSTSLPAVSVNLLAQSNAEELSCRILVNGAVKDQRSVSRPKAL
***: : :. .:: :::**.: . : **: :. :. :: .
TH_2866|M.thermoresistible__bu VYCFTKSA
MUL_3687|M.ulcerans_Agy99 TFCLVKSA
MLBr_02377|M.leprae_Br4923 TYCLVKSA
MAV_3247|M.avium_104 TYCVLTAT
MAB_3149|M.abscessus_ATCC_1997 IYCLVKSA
Mflv_3028|M.gilvum_PYR-GCK TYCLVKAA
Mvan_1058|M.vanbaalenii_PYR-1 TYCLVKAA
MSMEG_3495|M.smegmatis_MC2_155 TFCLVKSA
Rv0506|M.tuberculosis_H37Rv TSCQVSSG
Mb0518|M.bovis_AF2122/97 TSCQVSSG
MMAR_0839|M.marinum_M TFCQVTSA
* .: