For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLKQAWIPLVLAVVLPVSGLVVWRLHEKFGSEDLNANAGAGIEIVQFNPKILVYEVYGPPGSTAQISYFD TDANVHSVNTTLPWSVTLSTTLPTVSANLMALGSNDEIGCRVTVNGIVREEKSANGIDAQTYCLVKSA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0575 | - | - | 100% (138) | MmpS1 protein |
| M. smegmatis MC2 155 | MSMEG_0226 | - | 4e-33 | 45.71% (140) | MmpS5 protein |
| M. smegmatis MC2 155 | MSMEG_3495 | - | 2e-32 | 47.10% (138) | MmpS5 protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1582 | mmpS6 | 2e-33 | 47.86% (140) | membrane protein |
| M. gilvum PYR-GCK | Mflv_2704 | - | 4e-26 | 38.41% (138) | membrane family protein |
| M. tuberculosis H37Rv | Rv0403c | mmpS1 | 3e-33 | 47.48% (139) | membrane protein |
| M. leprae Br4923 | MLBr_02377 | - | 5e-35 | 48.57% (140) | hypothetical protein MLBr_02377 |
| M. abscessus ATCC 19977 | MAB_3149 | - | 4e-31 | 43.88% (139) | MmpS family protein |
| M. marinum M | MMAR_3743 | mmpS5_1 | 1e-53 | 69.06% (139) | membrane protein MmpS5_1 |
| M. avium 104 | MAV_1756 | - | 2e-44 | 63.85% (130) | Mmps1 protein |
| M. thermoresistible (build 8) | TH_2866 | - | 9e-32 | 42.45% (139) | PUTATIVE hypothetical protein Mvan_3834 |
| M. ulcerans Agy99 | MUL_3687 | mmpS5_1 | 2e-53 | 68.35% (139) | membrane protein MmpS5_1 |
| M. vanbaalenii PYR-1 | Mvan_3834 | - | 7e-31 | 44.53% (137) | hypothetical protein Mvan_3834 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3743|M.marinum_M ------MPTIPVTSVLKRAWIPLLMVVVLAISGLVVSRLHKIFGSEDLNA
MUL_3687|M.ulcerans_Agy99 --------------MLKRAWIPLLMVVVLAISGFVVSRLHKIFGSEDLNA
MAV_1756|M.avium_104 -----------------------MLVVVLAVSALIVSRLHKIFGSEDLNA
MSMEG_0575|M.smegmatis_MC2_155 --------------MLKQAWIPLVLAVVLPVSGLVVWRLHEKFGSEDLNA
Mb1582|M.bovis_AF2122/97 ------MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTS
Rv0403c|M.tuberculosis_H37Rv -----------MFGVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAP
MLBr_02377|M.leprae_Br4923 MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRES
MAB_3149|M.abscessus_ATCC_1997 -----------MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGA
Mflv_2704|M.gilvum_PYR-GCK ---------------MSRAWIPLVLVIVLLVAGFTVWRLRNMFASHPLPT
Mvan_3834|M.vanbaalenii_PYR-1 ---------------MTRAWIPLVLVLVLVVGGLAVWRIRNIFGSHQLPT
TH_2866|M.thermoresistible__bu -LWTSKAKDSAILTRLARAWIPLVMVVVVAIGGFAVWRIRGIFGSEQLPT
: *: :... * *:: *.*. .
MMAR_3743|M.marinum_M NAG-AGIDIVQFNPKVVIYEISGPAGSTANINFWDADANTHQVNAAPLPW
MUL_3687|M.ulcerans_Agy99 NAG-AGIDIVQFNPKVVIYEISGPAGSTANINFWDADANTHQVNAAPLPW
MAV_1756|M.avium_104 NAG-KGIEIVQFNPKVVVYEISGAPGSTANINYWDENANTHQVNNAPLPW
MSMEG_0575|M.smegmatis_MC2_155 NAG-AGIEIVQFNPKILVYEVYGPPGSTAQISYFDTDANVHSVNTT-LPW
Mb1582|M.bovis_AF2122/97 TAGGVANDIKPFNPKQVTLEVFGAPGTVATINYLDVDATPRQVLDTTLPW
Rv0403c|M.tuberculosis_H37Rv DTG-NLDPIIAFYPKHVLYEVFGPPGTVASINYLDADAQPHEVVNAAVPW
MLBr_02377|M.leprae_Br4923 YADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPW
MAB_3149|M.abscessus_ATCC_1997 SADNNAKDAVPYNPKTLVYEIFGEPGAMADVNYFNEDAQPTRVDNVQLPW
Mflv_2704|M.gilvum_PYR-GCK YAGSMSADTNKSDPKIVRYEIFGVPGATADINYIDDEGDANQIIGAPLPW
Mvan_3834|M.vanbaalenii_PYR-1 YAGSMSEDSNKSDPKIVRYEIFGDPGATADINYIDDEGDPNQIVGATLPW
TH_2866|M.thermoresistible__bu YAGSTSVDTDKANPKRVRYEIFGAPGTVADINYIDAEGDPHQVNGATLPW
:. ** : *: * .*: * :.: : :. : . :**
MMAR_3743|M.marinum_M SFTISTTLPSVSANIMAQGDGSQIGCRITVDGVVREEKSAAGVNPQTFCL
MUL_3687|M.ulcerans_Agy99 SFTISTTLPSVSANIMAQGDGSQIGCRITVDGVVREEKSAAGVNPQTFCL
MAV_1756|M.avium_104 STTISTTLPSVSANIMAQSDGSTISCKITVDGVVRDNQNSDGHNAQTFCL
MSMEG_0575|M.smegmatis_MC2_155 SVTLSTTLPTVSANLMALGSNDEIGCRVTVNGIVREEKSANGIDAQTYCL
Mb1582|M.bovis_AF2122/97 SYTITTTLPAVFANVVAQGDSNSIGCRITVNGVVKDERIVNEVRAYTFCL
Rv0403c|M.tuberculosis_H37Rv SFTIVTTLTAVVANVVARGDGASLGCRITVNEVIREERIVNAYHAHTSCL
MLBr_02377|M.leprae_Br4923 SLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCL
MAB_3149|M.abscessus_ATCC_1997 AFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVKMERVSTEHNAYIYCL
Mflv_2704|M.gilvum_PYR-GCK AIEVETDSPAMVGNIVAQGDGDFIGCRILSDGELKDERTIHNYTAYIYCF
Mvan_3834|M.vanbaalenii_PYR-1 SIEVETNSPAMVGNVVAQGDSDFIGCRISADGVVKDERTAHNVSAYVYCF
TH_2866|M.thermoresistible__bu SIEIVTNSPAMAGNVLAQGDSDFIGCRIVSDGVVKDERTTQRVSAYVYCF
: : : .:: .*::* .. :.*:: : :: :: . *:
MMAR_3743|M.marinum_M VKSA
MUL_3687|M.ulcerans_Agy99 VKSA
MAV_1756|M.avium_104 VKSA
MSMEG_0575|M.smegmatis_MC2_155 VKSA
Mb1582|M.bovis_AF2122/97 DKSS
Rv0403c|M.tuberculosis_H37Rv VKSA
MLBr_02377|M.leprae_Br4923 VKSA
MAB_3149|M.abscessus_ATCC_1997 VKSA
Mflv_2704|M.gilvum_PYR-GCK SKAT
Mvan_3834|M.vanbaalenii_PYR-1 TKSA
TH_2866|M.thermoresistible__bu TKSA
*::