For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRRVLDAAWEPTVPALMQLVAATAAPRLRSAFAEAGLDGIRPAQAIGLVPLAGGGLHASDLADRLGVSRQ AVAQAVTALERHGYVLRAPDPADARARIIELTPRGRQALRVMRANALDAQRRWQKILGPQRLGELRETLQ LLLDAESGA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_0228 | - | - | 100% (149) | hypothetical protein MMAR_0228 |
M. marinum M | MMAR_4237 | - | 2e-10 | 33.33% (96) | putative regulatory protein |
M. marinum M | MMAR_2939 | - | 7e-06 | 38.89% (72) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1078 | - | 2e-05 | 44.07% (59) | transcriptional repressor protein |
M. gilvum PYR-GCK | Mflv_2302 | - | 5e-16 | 33.33% (132) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1049 | - | 2e-05 | 44.07% (59) | transcriptional repressor protein |
M. leprae Br4923 | MLBr_02696 | - | 5e-05 | 31.58% (95) | putative MarR-family regulatory protein |
M. abscessus ATCC 19977 | MAB_0157 | - | 4e-07 | 36.90% (84) | putative transcriptional regulator MarR |
M. avium 104 | MAV_5249 | - | 1e-54 | 78.36% (134) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_0469 | - | 2e-09 | 35.71% (98) | transcriptional regulatory protein PadR- |
M. thermoresistible (build 8) | TH_0263 | - | 2e-08 | 31.91% (94) | transcriptional regulator, MarR family protein |
M. ulcerans Agy99 | MUL_4886 | - | 3e-78 | 98.66% (149) | hypothetical protein MUL_4886 |
M. vanbaalenii PYR-1 | Mvan_4344 | - | 6e-18 | 35.38% (130) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0228|M.marinum_M -------------------------------------------------- MUL_4886|M.ulcerans_Agy99 -------------------------------------------------- MAV_5249|M.avium_104 -------------------------------------------------- Mflv_2302|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4344|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1078|M.bovis_AF2122/97 -------------------------------------------------- Rv1049|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_02696|M.leprae_Br4923 MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP MAB_0157|M.abscessus_ATCC_1997 -------------------------------------------------- MSMEG_0469|M.smegmatis_MC2_155 -------------------------------------------------- TH_0263|M.thermoresistible__bu -------------------------------------------------- MMAR_0228|M.marinum_M -----------------------MRRVLDAAWEPTVPALMQLVAATAAPR MUL_4886|M.ulcerans_Agy99 -----------------------MRRVLDAAWEPTVPALMQLVAATAAPR MAV_5249|M.avium_104 -----------------------------------MPALVNLVAAAGAPR Mflv_2302|M.gilvum_PYR-GCK -----------------------------MDEIPATAVLMFMAHRDVETR Mvan_4344|M.vanbaalenii_PYR-1 -----------------------------MDAQPGTAVLMYIAHREVESR Mb1078|M.bovis_AF2122/97 -------------------------MGKGAAFDECACYTTRRAARQLGQA Rv1049|M.tuberculosis_H37Rv -------------------------MGKGAAFDECACYTTRRAARQLGQA MLBr_02696|M.leprae_Br4923 PHLRPPLQLAHTRSLNARHIALNCRLMADSEFTAHEVTELADGLHRALSK MAB_0157|M.abscessus_ATCC_1997 ---------------------------------MSTTDGLTADVLTVIAR MSMEG_0469|M.smegmatis_MC2_155 ---------------------------------MSVTSVLRRFNRTYTQR TH_0263|M.thermoresistible__bu -----------------------VADDLAMEFGDNLLWHLKQAWYFSLTA MMAR_0228|M.marinum_M LRSAFAE-----AGLDGIRPAQAIGLVPLAGGG---LHASDLADRLGVSR MUL_4886|M.ulcerans_Agy99 LRSAFAA-----AGLDGIRPAQAIGLVPLAGGG---LHASDLADRLGVSR MAV_5249|M.avium_104 LRAAFAE-----AALDGIRPAQSLALVPLAAGG---LHASDLADRLRVSR Mflv_2302|M.gilvum_PYR-GCK VMAALGQ-----AGHDDITMAQSRLMQRLDPGG---MRLTELAEQARVTK Mvan_4344|M.vanbaalenii_PYR-1 VMAALAR-----SGVGDVTVAQSRLLQRLDPGG---MRLTDLAEQARVTK Mb1078|M.bovis_AF2122/97 YDRALRP-----SGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVER Rv1049|M.tuberculosis_H37Rv YDRALRP-----SGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVER MLBr_02696|M.leprae_Br4923 LFSILRRRTPNGAVSGELTLAQLSILVTLLDQG--PIRMTDLAAHERVRT MAB_0157|M.abscessus_ATCC_1997 LNRWVSS-------YADLPVPTGQARLLALVGEMEDARISDLAQADHCSQ MSMEG_0469|M.smegmatis_MC2_155 IGVLDES-------YLGTGRPLNVSRVLFEIGGLGAVTIRDLRDRLGLDS TH_0263|M.thermoresistible__bu VNDAVSK--------HGVSTAQIGVLRQLSNEP--GLSGAELARRLLITP . :* MMAR_0228|M.marinum_M QAVAQAVTALERHGYVLRAPDPADARARIIELTPRGRQALRVMRANALDA MUL_4886|M.ulcerans_Agy99 QAVAQAVAALERHGYVLRAPDPADARARIIELTPRGRQALRVMRANALDA MAV_5249|M.avium_104 QAVAQAVAALERHGYVTRTPDPADARARMIELTPRGRQALQVMRANAIAM Mflv_2302|M.gilvum_PYR-GCK QTAGALIDQLERSGYVTRLPDPTDARARLVTLSDRGVEMCRRAGAEVGRV Mvan_4344|M.vanbaalenii_PYR-1 QTAGALVDQLERAGYVTRQPDPSDARARLVTLTDKGAEMCRRAGAEVARV Mb1078|M.bovis_AF2122/97 TTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGV Rv1049|M.tuberculosis_H37Rv TTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGV MLBr_02696|M.leprae_Br4923 PTTTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHGESLANRRAA MAB_0157|M.abscessus_ATCC_1997 PTMTVQLKRLQDVGYVERRVDPADKRAQRIKLTSKGREALVAMRAQRQGV MSMEG_0469|M.smegmatis_MC2_155 GYVTRILTRLENEGLVRVVPDPADGRRRIVELTDAGREAVNELEDRSESR TH_0263|M.thermoresistible__bu QGVQLALKSLEQRGLIERRPDPQHARILKVYLTREGRSVAKAVVGDAIAA : :. * : . . * : :: * MMAR_0228|M.marinum_M QRRWQKILGPQRLGELRETLQLLLDAESGA-------------------- MUL_4886|M.ulcerans_Agy99 QRRWQKILGPQRLGELRETLQLLLDAESGA-------------------- MAV_5249|M.avium_104 EKRWRKVLGERRLTELRETLTMLLAAEREPGG------------------ Mflv_2302|M.gilvum_PYR-GCK EAEWRERLGDTAFDAMRDALVTLASE------------------------ Mvan_4344|M.vanbaalenii_PYR-1 EQEWRQHLGDDAYGALRAALLSLREITDPYL------------------- Mb1078|M.bovis_AF2122/97 QAEVTASVGD--WPRVRRDIANLGQAAEACR------------------- Rv1049|M.tuberculosis_H37Rv QAEVTASVGD--WPRVRRDIANLGQAAEACR------------------- MLBr_02696|M.leprae_Br4923 LTTMLSQLPTSDLNILKNALAPLQRLASGEPVSSPAGDSPACKQA----- MAB_0157|M.abscessus_ATCC_1997 LDPWLSTLPAEEQRTLAEAAAILERLTRRMAAQSG--------------- MSMEG_0469|M.smegmatis_MC2_155 AADLVAPLTARQRERLADALATAELLVRAATVRLVEVDQDSDVARTALTH TH_0263|M.thermoresistible__bu HEAVFGVLTPEEQRTLRDLLARVVEKGTGHTLADDHITD----------- : : MMAR_0228|M.marinum_M -------------------------------------------------- MUL_4886|M.ulcerans_Agy99 -------------------------------------------------- MAV_5249|M.avium_104 -------------------------------------------------- Mflv_2302|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4344|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1078|M.bovis_AF2122/97 -------------------------------------------------- Rv1049|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_02696|M.leprae_Br4923 -------------------------------------------------- MAB_0157|M.abscessus_ATCC_1997 -------------------------------------------------- MSMEG_0469|M.smegmatis_MC2_155 YYDELNRRFPQGFDPGAPSGPEHGAHYIAAISDGQPVGFGGIRPLESGDD TH_0263|M.thermoresistible__bu -------------------------------------------------- MMAR_0228|M.marinum_M -------------------------------------------------- MUL_4886|M.ulcerans_Agy99 -------------------------------------------------- MAV_5249|M.avium_104 -------------------------------------------------- Mflv_2302|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4344|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1078|M.bovis_AF2122/97 -------------------------------------------------- Rv1049|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_02696|M.leprae_Br4923 -------------------------------------------------- MAB_0157|M.abscessus_ATCC_1997 -------------------------------------------------- MSMEG_0469|M.smegmatis_MC2_155 GPVAEVKRMWVDDRWRGAGLGSRILRHLETLAAEHGFARVRLDTNGNLGE TH_0263|M.thermoresistible__bu -------------------------------------------------- MMAR_0228|M.marinum_M ------------------------------ MUL_4886|M.ulcerans_Agy99 ------------------------------ MAV_5249|M.avium_104 ------------------------------ Mflv_2302|M.gilvum_PYR-GCK ------------------------------ Mvan_4344|M.vanbaalenii_PYR-1 ------------------------------ Mb1078|M.bovis_AF2122/97 ------------------------------ Rv1049|M.tuberculosis_H37Rv ------------------------------ MLBr_02696|M.leprae_Br4923 ------------------------------ MAB_0157|M.abscessus_ATCC_1997 ------------------------------ MSMEG_0469|M.smegmatis_MC2_155 AIALYERTGYAQIDRYNDNPYAQFFFEKRL TH_0263|M.thermoresistible__bu ------------------------------