For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDAQPGTAVLMYIAHREVESRVMAALARSGVGDVTVAQSRLLQRLDPGGMRLTDLAEQARVTKQTAGALV DQLERAGYVTRQPDPSDARARLVTLTDKGAEMCRRAGAEVARVEQEWRQHLGDDAYGALRAALLSLREIT DPYL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4344 | - | - | 100% (144) | MarR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_6049 | - | 3e-12 | 35.88% (131) | MarR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_3807 | - | 2e-09 | 34.86% (109) | MarR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0043c | - | 2e-10 | 36.03% (136) | MarR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_2302 | - | 1e-55 | 75.00% (136) | MarR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv0042c | - | 2e-10 | 36.03% (136) | MarR family transcriptional regulator |
| M. leprae Br4923 | MLBr_02696 | - | 7e-09 | 44.93% (69) | putative MarR-family regulatory protein |
| M. abscessus ATCC 19977 | MAB_1924 | - | 3e-07 | 34.04% (94) | MarR family transcriptional regulator |
| M. marinum M | MMAR_0228 | - | 5e-18 | 35.38% (130) | hypothetical protein MMAR_0228 |
| M. avium 104 | MAV_5249 | - | 7e-19 | 40.52% (116) | transcriptional regulator, MarR family protein |
| M. smegmatis MC2 155 | MSMEG_6913 | - | 3e-10 | 35.38% (130) | putative transcriptional regulatory protein |
| M. thermoresistible (build 8) | TH_0729 | - | 1e-08 | 32.38% (105) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_4886 | - | 7e-18 | 35.38% (130) | hypothetical protein MUL_4886 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_4344|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_2302|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_0228|M.marinum_M --------------------------------------------------
MUL_4886|M.ulcerans_Agy99 --------------------------------------------------
MAV_5249|M.avium_104 --------------------------------------------------
Mb0043c|M.bovis_AF2122/97 ---MSVVRSIG-KKMQRISGPNALAVKG----------------------
Rv0042c|M.tuberculosis_H37Rv ---MSVVRSIG-KKMQRISGPNALAVKG----------------------
MLBr_02696|M.leprae_Br4923 MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP
MSMEG_6913|M.smegmatis_MC2_155 --------------------------------------------------
TH_0729|M.thermoresistible__bu --------------------------------------------------
MAB_1924|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_4344|M.vanbaalenii_PYR-1 ----------------------------------MDAQPGTAVLMYIAHR
Mflv_2302|M.gilvum_PYR-GCK ----------------------------------MDEIPATAVLMFMAHR
MMAR_0228|M.marinum_M ----------------------------MRRVLDAAWEPTVPALMQLVAA
MUL_4886|M.ulcerans_Agy99 ----------------------------MRRVLDAAWEPTVPALMQLVAA
MAV_5249|M.avium_104 ----------------------------------------MPALVNLVAA
Mb0043c|M.bovis_AF2122/97 ---RPTQVYGHT------HVRLDCRFMADSEFTAPEVTQLAEGLHRALSK
Rv0042c|M.tuberculosis_H37Rv ---RPTQVYGHT------HVRLDCRFMADSEFTAPEVTQLAEGLHRALSK
MLBr_02696|M.leprae_Br4923 PHLRPPLQLAHTRSLNARHIALNCRLMADSEFTAHEVTELADGLHRALSK
MSMEG_6913|M.smegmatis_MC2_155 --------------------------MAE---TEPQVTELAGELQRVLSK
TH_0729|M.thermoresistible__bu --------------------------------MKPPAVDPSTSLGADLLW
MAB_1924|M.abscessus_ATCC_1997 ------------------------------MSQDGVGVDLETSLGYLLKE
*
Mvan_4344|M.vanbaalenii_PYR-1 EVESRVMAALARSGVGDVTVAQSRLLQRLDPGG-MRLTDLAEQARVTKQT
Mflv_2302|M.gilvum_PYR-GCK DVETRVMAALGQAGHDDITMAQSRLMQRLDPGG-MRLTELAEQARVTKQT
MMAR_0228|M.marinum_M TAAPRLRSAFAEAGLDGIRPAQAIGLVPLAGGG-LHASDLADRLGVSRQA
MUL_4886|M.ulcerans_Agy99 TAAPRLRSAFAAAGLDGIRPAQAIGLVPLAGGG-LHASDLADRLGVSRQA
MAV_5249|M.avium_104 AGAPRLRAAFAEAALDGIRPAQSLALVPLAAGG-LHASDLADRLRVSRQA
Mb0043c|M.bovis_AF2122/97 LISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT
Rv0042c|M.tuberculosis_H37Rv LISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT
MLBr_02696|M.leprae_Br4923 LFSILRRRTPNGAVSGELTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT
MSMEG_6913|M.smegmatis_MC2_155 VFSVLRRGDTHRGTAGDLTLAQLSILLTLLEGGPIRMTELAARERVRTPT
TH_0729|M.thermoresistible__bu VVSRINRLATQRIRLP-LPVAQARLLSTIQDRGSARISDLAVLDHCSQPT
MAB_1924|M.abscessus_ATCC_1997 TSSALRTAMEEVLRPLGMSITHYSCLELLAQRPGLSNSELARGAFVTRQT
: :: : : ::** :
Mvan_4344|M.vanbaalenii_PYR-1 AGALVDQLERAGYVTRQPDPSDARARLVTLTDKGAEMCRRAGAEVARVEQ
Mflv_2302|M.gilvum_PYR-GCK AGALIDQLERSGYVTRLPDPTDARARLVTLSDRGVEMCRRAGAEVGRVEA
MMAR_0228|M.marinum_M VAQAVTALERHGYVLRAPDPADARARIIELTPRGRQALRVMRANALDAQR
MUL_4886|M.ulcerans_Agy99 VAQAVAALERHGYVLRAPDPADARARIIELTPRGRQALRVMRANALDAQR
MAV_5249|M.avium_104 VAQAVAALERHGYVTRTPDPADARARMIELTPRGRQALQVMRANAIAMEK
Mb0043c|M.bovis_AF2122/97 TTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGESLANRRAALA
Rv0042c|M.tuberculosis_H37Rv TTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGESLANRRAALA
MLBr_02696|M.leprae_Br4923 TTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHGESLANRRAALT
MSMEG_6913|M.smegmatis_MC2_155 TTVAIRRLEKLGLVKRSRDPSDLRAVLVDVTPQGLVQHRESLAARRADLA
TH_0729|M.thermoresistible__bu MTTQVRRLEEAGLVSRTVDPDDGRAVRISITPEGVRTLAQVRADRAAAID
MAB_1924|M.abscessus_ATCC_1997 MNVLLQNLERDGYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRSVEL
: **. * * * : :. : :: .* *
Mvan_4344|M.vanbaalenii_PYR-1 EWRQHLGDDAYGALRAALLSLREITDPYL--------------------
Mflv_2302|M.gilvum_PYR-GCK EWRERLGDTAFDAMRDALVTLASE-------------------------
MMAR_0228|M.marinum_M RWQKILGPQRLGELRETLQLLLDAESGA---------------------
MUL_4886|M.ulcerans_Agy99 RWQKILGPQRLGELRETLQLLLDAESGA---------------------
MAV_5249|M.avium_104 RWRKVLGERRLTELRETLTMLLAAEREPGG-------------------
Mb0043c|M.bovis_AF2122/97 ALLSQLPRSDLETLRKALAPLERLASGEPASGPASNS--PARKRA----
Rv0042c|M.tuberculosis_H37Rv ALLSQLPRSDLETLRKALAPLERLASGEPASGPASNS--PARKRA----
MLBr_02696|M.leprae_Br4923 TMLSQLPTSDLNILKNALAPLQRLASGEPVSSPAGDS--PACKQA----
MSMEG_6913|M.smegmatis_MC2_155 ERLSKLSDEDLATLARALGPLERLAGQDEDKKNERETPKPAEQTS----
TH_0729|M.thermoresistible__bu PYIDRLSDTDRAVLADAVRVMRQLLADAADPAVLPADPPSRPHESTELR
MAB_1924|M.abscessus_ATCC_1997 RMLAGMTTTEQSDAFRLLRLMIHALRDGA--------------------
: : :