For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVER TTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVGDWPRVRRDIANL GQAAEACR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1078 | - | - | 100% (148) | transcriptional repressor protein |
| M. bovis AF2122 / 97 | Mb0758 | - | 4e-05 | 28.57% (119) | transcriptional regulatory protein |
| M. bovis AF2122 / 97 | Mb2911 | - | 6e-05 | 30.89% (123) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv1049 | - | 2e-80 | 100.00% (148) | transcriptional repressor protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1924 | - | 2e-08 | 30.71% (127) | MarR family transcriptional regulator |
| M. marinum M | MMAR_1075 | - | 1e-05 | 27.94% (136) | transcriptional regulator |
| M. avium 104 | MAV_5249 | - | 2e-05 | 40.00% (70) | transcriptional regulator, MarR family protein |
| M. smegmatis MC2 155 | MSMEG_6824 | - | 1e-05 | 37.35% (83) | MarR-family protein regulatory protein |
| M. thermoresistible (build 8) | TH_3245 | - | 6e-05 | 26.62% (139) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_0833 | - | 1e-05 | 27.94% (136) | transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_1524 | - | 4e-05 | 28.97% (107) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1078|M.bovis_AF2122/97 --------------------------------------------------
Rv1049|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_1075|M.marinum_M --------------------------------------------------
MUL_0833|M.ulcerans_Agy99 --------------------------------------------------
MAB_1924|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_1524|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3245|M.thermoresistible__bu --------------------------------------------------
MAV_5249|M.avium_104 --------------------------------------------------
MSMEG_6824|M.smegmatis_MC2_155 MGGTAVLLAEDCAHPGTEQHPDRGDPDEHRGDPHGQRWSAGPAVAWHRHG
Mb1078|M.bovis_AF2122/97 ----------------------------MG--KGAAFDECACYTTRRAAR
Rv1049|M.tuberculosis_H37Rv ----------------------------MG--KGAAFDECACYTTRRAAR
MMAR_1075|M.marinum_M ----------MAPDNKRDPIAAARANWEAGGWGDVAQGMVAVTSVMRAHQ
MUL_0833|M.ulcerans_Agy99 ----------MAPDNKRDPIAAARANWEAGGWGDVAQGMVAVTSVMRAHQ
MAB_1924|M.abscessus_ATCC_1997 ---------------------------MSQDGVGVDLETSLGYLLKETSS
Mvan_1524|M.vanbaalenii_PYR-1 -------------------------------MAPLSLDEHLCFALYSASR
TH_3245|M.thermoresistible__bu --------------------------MEERSSGIAALHQRIPFLLSQLGA
MAV_5249|M.avium_104 ------------------------------------MPALVNLVAAAGAP
MSMEG_6824|M.smegmatis_MC2_155 RHDTTTRCPPCQTVILTTVTPAKKRDISPKRGWLSPKQQRAWIAFMRVQL
Mb1078|M.bovis_AF2122/97 QLGQAYDRALRPS-GLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE
Rv1049|M.tuberculosis_H37Rv QLGQAYDRALRPS-GLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE
MMAR_1075|M.marinum_M ILLARVEAALRPY-DLSFSRYELLRLLAFSRTGA---LPITKASDRLQVH
MUL_0833|M.ulcerans_Agy99 ILLARVEAALRPY-DLSFSRYELLRLLAFSRTGA---LPITKASDRLQVH
MAB_1924|M.abscessus_ATCC_1997 ALRTAMEEVLRPL-GMSITHYSCLELLAQRPGLS-----NSELARGAFVT
Mvan_1524|M.vanbaalenii_PYR-1 AMTAAYRPLLTEL-GITYPQYLVLLVLGEEGDIS-----VGRLGERLQLD
TH_3245|M.thermoresistible__bu HLAEDFVRRLEPF-GIEPRIYAVLTALSEVDGQS-----QRELSAQLGIH
MAV_5249|M.avium_104 RLRAAFAEAALD--GIRPAQSLALVPLAAGGLHA------SDLADRLRVS
MSMEG_6824|M.smegmatis_MC2_155 RMSYEMNRQLQADSGLSLSDYDVLVALSDVGDKG---MRVSDLAAQIGWE
: .: * :. . .
Mb1078|M.bovis_AF2122/97 RTTLTRNLEVMRRDGLVR-VMAGADARCKRIELTAKGRAALQKA-VPLWR
Rv1049|M.tuberculosis_H37Rv RTTLTRNLEVMRRDGLVR-VMAGADARCKRIELTAKGRAALQKA-VPLWR
MMAR_1075|M.marinum_M VTSVTHAIRRLEADGLVRRVPHPTDGRTTLVQITDLGRSTVEDATVTLNE
MUL_0833|M.ulcerans_Agy99 VTSVTHAIRRLEADGLVRRVPHPTDGRTTLVQITDLGRSTVEDATVTLNE
MAB_1924|M.abscessus_ATCC_1997 RQTMNVLLQNLERDGYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRS
Mvan_1524|M.vanbaalenii_PYR-1 SGTLSPLLKRMEAGGIVRRQRSETDERQVEVALTTEGKR-LRRKVHCIPE
TH_3245|M.thermoresistible__bu RNAMVAVVDKMESLGLVKRLPHPADRRAFAVTLTDKARELLPALDAEGRA
MAV_5249|M.avium_104 RQAVAQAVAALERHGYVTRTPDPADARARMIELTPRGRQALQVMRANAIA
MSMEG_6824|M.smegmatis_MC2_155 RSRLSHQLRRMEERGLTERCPSREDGRTSIVVLTAVGWRAIQEAAPGHVD
: : :. * . : : :* . :
Mb1078|M.bovis_AF2122/97 GVQAEVT--ASVGDWPRVRRDIANLGQAAEACR-------
Rv1049|M.tuberculosis_H37Rv GVQAEVT--ASVGDWPRVRRDIANLGQAAEACR-------
MMAR_1075|M.marinum_M HVFANIG--MSTGESEALVSSIETLRRSAGDF--------
MUL_0833|M.ulcerans_Agy99 HVFANIG--MSTGESEALVSSIETLRRSAGDF--------
MAB_1924|M.abscessus_ATCC_1997 VELRMLAG-MTTTEQSDAFRLLRLMIHALRDGA-------
Mvan_1524|M.vanbaalenii_PYR-1 KLFPLTG--LTPEQAIDLRADIVRLTEALIDSQEGNPHG-
TH_3245|M.thermoresistible__bu QEDAVTAA-MTPAERRETLRLLQKMSSTVGLVPGVHPKLG
MAV_5249|M.avium_104 MEKRWRKV-LGERRLTELRETLTMLLAAEREPGG------
MSMEG_6824|M.smegmatis_MC2_155 LVRSLFFDPLPENLLAPFTAALEHIHVNLNHNSSLPPEPR
: :