For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2076 | - | - | 100% (231) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0701 | - | 3e-19 | 60.00% (75) | hypothetical protein Mflv_0701 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3407 | - | 1e-06 | 25.55% (227) | hypothetical protein MAB_3407 |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_5004 | - | 2e-70 | 63.33% (210) | hypothetical protein MAV_5004 |
M. smegmatis MC2 155 | MSMEG_0145 | - | 4e-88 | 75.57% (221) | hypothetical protein MSMEG_0145 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1320 | - | 3e-18 | 28.99% (207) | hypothetical protein Mvan_1320 |
CLUSTAL 2.0.9 multiple sequence alignment TH_2076|M.thermoresistible__bu MAVASPVTPRLTVLALLLMTFATGLVDAVSVLVLGHVFVANMTGNVIFLG MSMEG_0145|M.smegmatis_MC2_155 MAIASPVSERLTVTALLLLTVATGLVDAISVLVLGHVFVANMTGNVIFLG MAV_5004|M.avium_104 ------------MAALLLLTFATGLADAISILVLGHVFVANMTGNVIFLG Mvan_1320|M.vanbaalenii_PYR-1 --MMADAPADRALAATVALTFVTGVVDAVGFLGLDRVFTGNMTGNIVILG Mflv_0701|M.gilvum_PYR-GCK ------------------MRSACWCWDMCSSRTLPERCVPRLFGTCHIP- MAB_3407|M.abscessus_ATCC_1997 ----MWSIRRREMVLATGLSTVAGFLDAIGFVHLGGYFLSFMSGNTTRMA : . * . * : *. TH_2076|M.thermoresistible__bu FWFVPTSGVDLTAAVVAFLAFLVGTVIGGRLARHLAHHVR----GWITSA MSMEG_0145|M.smegmatis_MC2_155 FWFVPHSGVDLTAAVVAFPAFVVGTIIGGRLARHLDGQVR----TWLTTA MAV_5004|M.avium_104 FWLAPRTSIDLTAVVVALPTFACTTILSGRLARHFGERVR----AWISTV Mvan_1320|M.vanbaalenii_PYR-1 MGVAGADELPVLGPAVALGAFTAAAYLAGLVLRGPGGARQPGWQHRVTVL Mflv_0701|M.gilvum_PYR-GCK -------GVDLTAALVAFVGFFDGTIIGGRLSRHLDSNVR----VWLTTA MAB_3407|M.abscessus_ATCC_1997 ASTATLNWESAYKAAGLIGMFFIGVMIGAIASRVSGEHER---------- : * . :.. * : TH_2076|M.thermoresistible__bu LCVETVLLLALSALAGAGWLDYHNDQKFILIAGLAVAFGLQNASARRFGI MSMEG_0145|M.smegmatis_MC2_155 LGVEVVLLTVLSILAGTGVLDYQDNTKLFLIAGLAITFGIQNATARQFGI MAV_5004|M.avium_104 LATEIVLLVGLSVLAGSGILSYQQDSKLLMIGILAVTFGLQHSSARQFGI Mvan_1320|M.vanbaalenii_PYR-1 LTLGAATLTVLTVVAVVTGRHPEPVVQIPMAAATAAVMGSQAMVARAVAV Mflv_0701|M.gilvum_PYR-GCK LGLEVVALAVLAAVAGANLVHYHDYSKLILIVGLAVVSAARTQPPGSLAS MAB_3407|M.abscessus_ATCC_1997 ----IAVLAVASTTVAAAAITQESGAGVAALLVTSLAMGAMNSVFQRSGE . * : . . . : . . . TH_2076|M.thermoresistible__bu QELSTTVLTSTIVGIGF---DSRLAGGT----GKREKLRYTVVLTMLGGA MSMEG_0145|M.smegmatis_MC2_155 QELSTTVLTSTIVGLGF---DSRLAGGT----GEREKLRYAVVATMCLGA MAV_5004|M.avium_104 QELSTTVLTSTIVSLGL---DSRLAGGT----GERQRLRIGVVATMCAGA Mvan_1320|M.vanbaalenii_PYR-1 ADMTTVVVTSTLASLAG---ETWTRGGR----GAVANRRLAAIVVIFAGA Mflv_0701|M.gilvum_PYR-GCK RCAPRFCRPYSPESLRP---LFRAGGCASHSLASPDNHDQGNESRAEIAG MAB_3407|M.abscessus_ATCC_1997 VQVGLTYITGTVVKAGQRLVDAFFGGPR-----WVWLRYITLWAGLTVGA . : * .. TH_2076|M.thermoresistible__bu MVGATMTLVTVAPVIALAAAFVAVSAAIFWSGPSPTSENDL--- MSMEG_0145|M.smegmatis_MC2_155 VIGATLSRFTVAPVIALAAVVIATSACIFRFGR----------- MAV_5004|M.avium_104 FLGATMSRYVVAPVFVVAAAVIAASLLIFRFGPPAAKPSAAEAN Mvan_1320|M.vanbaalenii_PYR-1 VVGALLMRIHIAVPFGLAAATTAAVALLGHLRLSPPVRSR---- Mflv_0701|M.gilvum_PYR-GCK TDGQWVRQQKVSPRSIEDFRSVVESDRIFQL------------- MAB_3407|M.abscessus_ATCC_1997 VLGAATYHRIGLDALWVGLVLLVVSTVSTWVARRVSSPVSNSD- * .