For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_5120 (-)

annotation: oxidoreductase
coordinates: 5273203 - 5273949
length: 248

TGGSAQPPRVALVTGAAGGQGRAIAERLRGNGFAVAACDRRIDELAATVAASGDDRLIAVELDVTSEQQW
RSAVERVVDRFGALSALVNCAGVLHRTPLPQETADAFENAWRVNCFGAFLGMRAALERLRGTPGASIVNI
CSTGAIRPFPQHCAYGSSKWALRGLTQTAAAELAPAGIRVNAVFPGPIATPMLDEATQTRLAAAASFGRI
GQPGEVADAVAFLVSAEASFITGAELVVDGGQCLQIR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_5120--100% (248)oxidoreductase
M. avium 104MAV_5136-7e-3841.63% (233) 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase
M. avium 104MAV_2509-2e-3436.48% (233) 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2025fabG31e-3639.06% (233) 20-beta-hydroxysteroid dehydrogenase
M. gilvum PYR-GCKMflv_4104-2e-8868.91% (238) short-chain dehydrogenase/reductase SDR
M. tuberculosis H37RvRv2002fabG31e-3639.06% (233) 20-beta-hydroxysteroid dehydrogenase
M. leprae Br4923MLBr_01807fabG12e-2131.69% (243) 3-oxoacyl-
M. abscessus ATCC 19977MAB_4680c-2e-3638.20% (233) putative short-chain dehydrogenase/reductase
M. marinum MMMAR_0402-2e-9873.68% (247) short chain dehydrogenase
M. smegmatis MC2 155MSMEG_2566-4e-8768.49% (238) 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase
M. thermoresistible (build 8)TH_3912-4e-8567.95% (234) PUTATIVE short-chain dehydrogenase/reductase SDR
M. ulcerans Agy99MUL_1052-3e-9772.87% (247) short chain dehydrogenase
M. vanbaalenii PYR-1Mvan_2242-8e-9271.43% (238) short-chain dehydrogenase/reductase SDR

CLUSTAL 2.0.9 multiple sequence alignment


Mb2025|M.bovis_AF2122/97            -----------MSGR---LIGKVALVSGGARGMGASHVRAMVAEGAKVVF
Rv2002|M.tuberculosis_H37Rv         -----------MSGR---LIGKVALVSGGARGMGASHVRAMVAEGAKVVF
MAB_4680c|M.abscessus_ATCC_199      -----------MNGNSALLQGKNVIVTGGARGLGAAFSRHIVSQGGRVVI
MMAR_0402|M.marinum_M               -----------MTGG-----GRVALVTGAAGGQGWAIVQRLRAEGHSVAA
MUL_1052|M.ulcerans_Agy99           -----------MTGG-----GRVALVTGAAGGQGWAIVQRLRAEGHSVAA
MAV_5120|M.avium_104                -----------MTGGSA-QPPRVALVTGAAGGQGRAIAERLRGNGFAVAA
Mflv_4104|M.gilvum_PYR-GCK          -----------MAAD------RIALVTGAARGQGAAIVTRLLQDGFRVAA
Mvan_2242|M.vanbaalenii_PYR-1       -----------MAGD------RVALITGAARGQGAAIAARLIQDGFCVAA
MSMEG_2566|M.smegmatis_MC2_155      -----------MTVD------RVALVTGAARGQGAAIVAKLVADGFRVAA
TH_3912|M.thermoresistible__bu      -------------------------VTGAARGQGSAIVRRLLQDGYRVAA
MLBr_01807|M.leprae_Br4923          MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV
                                                             ::*.  * * :    :  :*  *. 

Mb2025|M.bovis_AF2122/97            GDILDEEGKAVAAELA-DAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVL
Rv2002|M.tuberculosis_H37Rv         GDILDEEGKAVAAELA-DAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVL
MAB_4680c|M.abscessus_ATCC_199      ADVLDGDGRQLAAELG-DAARFTHLDVTDAEQWRELIDTTLAGFGTITGL
MMAR_0402|M.marinum_M               CDLRADRLDALVAESGDDAVISLALDVTDEAQWQEAVERAVTRFGALTAL
MUL_1052|M.ulcerans_Agy99           CDLRADRLDALVAESGDDAVISLALDVTDEAQWQEAVERAVTRFGALTAL
MAV_5120|M.avium_104                CDRRIDELAATVAASGDDRLIAVELDVTSEQQWRSAVERVVDRFGALSAL
Mflv_4104|M.gilvum_PYR-GCK          CDLLGDDVTRTVAAHDTDHAVAIELDVTSAEQWTRAVGEVVDRFGGLSTL
Mvan_2242|M.vanbaalenii_PYR-1       CDLLVDDLGQTVERLGPDRALAVELDVTSEEQWASAVAAVVDRFGALTAL
MSMEG_2566|M.smegmatis_MC2_155      TDLMIDDLRMSTADLG-GAVIALELDVTSAEQWQWAVHATVEEFGSLGAL
TH_3912|M.thermoresistible__bu      CDVLVDELHGSVADLDGDTVLPLALDVTSAPQWADAVAATVGRFGALSAL
MLBr_01807|M.leprae_Br4923          THR---------ASVVPDWFFGVECDVTDNDAIGAAFKAVEEHQGPVEVL
                                     .               .       ***.       .  .    * :  *

Mb2025|M.bovis_AF2122/97            VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI
Rv2002|M.tuberculosis_H37Rv         VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI
MAB_4680c|M.abscessus_ATCC_199      VNNAGISSAAMVADEPLEHFRKVIEINLVGVFIGMQAVIPAMRAHGCGSI
MMAR_0402|M.marinum_M               INNAGVLHRAALVDETAAGFESAWRVNCLGAFLGMRAALGALSAAEGPVI
MUL_1052|M.ulcerans_Agy99           INNAGVLHRAALVDETAAGFESAWRVNCLGAFLGMRAALGALSAAEGPVI
MAV_5120|M.avium_104                VNCAGVLHRTPLPQETADAFENAWRVNCFGAFLGMRAALERLRGTPGASI
Mflv_4104|M.gilvum_PYR-GCK          VNNAGVLHRASLADETPDGFEGSWRVNSLGPFLGIQAALPHLKAAEGAAI
Mvan_2242|M.vanbaalenii_PYR-1       VNNAGVLHRASLSEETPAGFEGSWRVNCLGPFLGIQASLPHLREAEGAAI
MSMEG_2566|M.smegmatis_MC2_155      VNNAGVLHRASLDDETPDGFEGSWRVNCLGPFLGIRTALPHLRRVDGAAV
TH_3912|M.thermoresistible__bu      INNAGVLHRAALPDETAEGFERSWRVNCLGPFLGIRAALDPLRHAHNASV
MLBr_01807|M.leprae_Br4923          VANAGITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQRFGRY
                                    :  **:     :   .   :.    :*  * *   :     :        

Mb2025|M.bovis_AF2122/97            INISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGL
Rv2002|M.tuberculosis_H37Rv         INISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGL
MAB_4680c|M.abscessus_ATCC_199      VNISSAAGLVGLALTSGYGASKWGVRGLSKVAAIELGRERIRVNSVHPGV
MMAR_0402|M.marinum_M               VNICSTGAIRPFPHHCAYGAAKWALRGLTQTAAAELAPAGIRVNAVFPGP
MUL_1052|M.ulcerans_Agy99           VNICSTGAIRPFPHHCAYGAAKWALRGLTQTAAAELAPAGFRVNAVFPGP
MAV_5120|M.avium_104                VNICSTGAIRPFPQHCAYGSSKWALRGLTQTAAAELAPAGIRVNAVFPGP
Mflv_4104|M.gilvum_PYR-GCK          VNTCSTGAIRPFPNHAAYGSSKWALRGLTQVAAVELAPSGIRVNAVFPGP
Mvan_2242|M.vanbaalenii_PYR-1       VNTCSTGAIRPFPNHSAYGSSKWALRGLTQVAAVELAPAGIRVNAVFPGP
MSMEG_2566|M.smegmatis_MC2_155      VNTCSTGAIRPFPNHAAYGSSKWALRGLTQVAAAELAPDGIRVNAVFPGP
TH_3912|M.thermoresistible__bu      VNTCSTGALRAFPNHAAYGSSKWALRGLTQIAAAELAAAGIRVNAVLPGP
MLBr_01807|M.leprae_Br4923          IFMGSVVGLSGVPGQANYAASKSGLIGMARSLARELGSRSITANVVAPGF
                                    :   *  .:        * ::* .: *:::  * **.   : .* : ** 

Mb2025|M.bovis_AF2122/97            VKTPMTDWV-----PEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGA
Rv2002|M.tuberculosis_H37Rv         VKTPMTDWV-----PEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGA
MAB_4680c|M.abscessus_ATCC_199      IYTPMTAKEGFREGEGNMPIAAMGRVGNADEVAGAVAYLLSDAASYVTGA
MMAR_0402|M.marinum_M               IATSMLDEP---TQARLAAVSMFGRLGRPAEVADAVAFLVSENSSFITGS
MUL_1052|M.ulcerans_Agy99           IATSMLDEP---TQARLAAVSMFGRLGRHAEVADAVAFLVSENSSFITGS
MAV_5120|M.avium_104                IATPMLDEA---TQTRLAAAASFGRIGQPGEVADAVAFLVSAEASFITGA
Mflv_4104|M.gilvum_PYR-GCK          VETPMLDAN---TQTRLAANALMGRIGKPMEIADAVAFLVSEHATFITGS
Mvan_2242|M.vanbaalenii_PYR-1       VETPMLDPT---TQSRLAATALMGRIGTPMEIADAVAFLVSEHATFITGS
MSMEG_2566|M.smegmatis_MC2_155      VATPMLDES---TQERLAARAAAGRLARPAEIADAVAFLLSEHASFITGS
TH_3912|M.thermoresistible__bu      VATPMLDDA---TQRRLAATMAAGRLGRPTEVADAVAFLVSEQASFITGS
MLBr_01807|M.leprae_Br4923          IDTEMTRAMDSKYQEAALQAIPLGRIGAVEEIAGAVSFLASEDAGYISGA
                                    : * *                  ** .   *::. * :* *  : : :*:

Mb2025|M.bovis_AF2122/97            EFVVDGGTVAGLAHNDFGAVEVSSQPEWVT
Rv2002|M.tuberculosis_H37Rv         EFVVDGGTVAGLAHNDFGAVEVSSQPEWVT
MAB_4680c|M.abscessus_ATCC_199      ELAVDGGWTAGPT-----LTTITGQ-----
MMAR_0402|M.marinum_M               ELVVDGGQCLQVP-----------------
MUL_1052|M.ulcerans_Agy99           ELVVDGGQCLQVP-----------------
MAV_5120|M.avium_104                ELVVDGGQCLQIR-----------------
Mflv_4104|M.gilvum_PYR-GCK          ELIVDGGQSLQIG-----------------
Mvan_2242|M.vanbaalenii_PYR-1       ELTVDGGQSLQIG-----------------
MSMEG_2566|M.smegmatis_MC2_155      ELVVDGGQCLQIG-----------------
TH_3912|M.thermoresistible__bu      ELVVDGGQSLTIG-----------------
MLBr_01807|M.leprae_Br4923          VIPVDGGLGMGH------------------
                                     : ****