For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTEPLVGVVGVGYVGLTTAVCVAAAGRKTVAVDINPDRVGRLRAGVAVIDEPGLSELLGDGLAGGVLRF SADFAELADRDVVFVCVPTPSAPDGHADLAAVESVIDRLGRVLRRGAVVALKSTVPVGTTSTMAQRLCHK GIRVVSTPEFLREGRAVDDFRNPDRLVIGSHDELAAQLVHQAYGLAGHRVLRMSPESAELAKYASNAFLA VKLSYTNSLAALCARVGADIDDVTCCMGADRRIGAEFLRPGPGWGGSCLPKDTAALLDIAHRHRVSFAEV EAARQTNTAQARRIVTALRHTLGRPLSGRRITALGLTFKAATSDTRESPALAACRELAAAGAQVAGYDPQ LPNIDPAVLQQNRVTAVDDPYRAAKAADAVVVLTEWPQFRSLDWRAVAQDAPLAVVLDARNSLDPATVRE AGLRYLGNGVPQGF
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_4092 | - | - | 100% (434) | UDP-glucose 6-dehydrogenase |
M. avium 104 | MAV_4823 | - | 6e-65 | 38.55% (441) | UDP-glucose 6-dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0330 | udgA | 3e-66 | 38.32% (441) | UDP-glucose 6-dehydrogenase UdgA |
M. gilvum PYR-GCK | Mflv_0289 | - | 3e-64 | 37.70% (443) | UDP-glucose 6-dehydrogenase |
M. tuberculosis H37Rv | Rv0322 | udgA | 3e-66 | 38.32% (441) | UDP-glucose 6-dehydrogenase UdgA |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4295c | - | 6e-68 | 39.49% (433) | UDP-glucose 6-dehydrogenase (UdgA) |
M. marinum M | MMAR_0603 | udgA | 3e-65 | 38.11% (433) | UDP-glucose dehydrogenase UdgA |
M. smegmatis MC2 155 | MSMEG_5982 | - | 6e-65 | 36.96% (441) | UDP-glucose 6-dehydrogenase |
M. thermoresistible (build 8) | TH_0768 | udgA | 6e-63 | 38.14% (430) | PROBABLE UDP-GLUCOSE 6-DEHYDROGENASE UDGA (UDP-GLC |
M. ulcerans Agy99 | MUL_1511 | - | 1e-23 | 26.20% (397) | UDP-glucose 6-dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_0598 | - | 1e-63 | 38.13% (438) | UDP-glucose 6-dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0289|M.gilvum_PYR-GCK ---MRCT----VFGTGYLGATHAAGMAELGHEVVGVDIDPGKVAKLAAGE Mvan_0598|M.vanbaalenii_PYR-1 ---MRCT----VFGTGYLGATHAAGMAELGHDVLGVDIDAGKVAKLSGGE TH_0768|M.thermoresistible__bu ---MRCT----VFGAGYLGTTHAAGMAALGHEVIAVDVDAGKVAKLAAGE Mb0330|M.bovis_AF2122/97 ---MRCS----VFGTGYLGATHAVGMAQLGHEVVGVDIDPGKVAKLAGGD Rv0322|M.tuberculosis_H37Rv ---MRCS----VFGTGYLGATHAVGMAQLGHEVVGVDIDPGKVAKLAGGD MMAR_0603|M.marinum_M ---MRCT----VFGTGYLGATHAVGMAQLGHEVVGVDIDPGKVAKLAGGD MAB_4295c|M.abscessus_ATCC_199 ---MRCT----VFGTGYLGATHAACMAELGHEVLGVDIDPGKVAKLSSGD MSMEG_5982|M.smegmatis_MC2_155 ---MRMV----VMGTGYLGATHAACMAELGHEVLGVDIDPAKLAKLEAGE MAV_4092|M.avium_104 ---MSTEPLVGVVGVGYVGLTTAVCVAAAGRKTVAVDINPDRVGRLRAGV MUL_1511|M.ulcerans_Agy99 MTTQPSERICIVGGAGHVGLPLALVLADEGYNVDILDTNAEALETIMAGR * *.*::* . * :* * .. :* :. : : .* Mflv_0289|M.gilvum_PYR-GCK VPFYEPGLREALQRNIEAGRLRFTTDYAEAAEFADVHFLGVGTPQKKGEY Mvan_0598|M.vanbaalenii_PYR-1 VPFYEPGLREMLRRNIDAGRLRFTTDYAEAAGFADVHFLGVGTPQKKGEY TH_0768|M.thermoresistible__bu VPFYEPGLRALVTENLATGRLQFTTDYDAAADFADLHFLGVGTPQQRGDY Mb0330|M.bovis_AF2122/97 IPFYEPGLRKLLTDNLAAGRLRFTTDYDMAADFADVHFLGVGTPQKIGEY Rv0322|M.tuberculosis_H37Rv IPFYEPGLRKLLTDNLAAGRLRFTTDYDMAADFADVHFLGVGTPQKIGEY MMAR_0603|M.marinum_M IPFYEPGLRKLLRDNLAAGRLHFTTDYDMAAEFADVHFLGVGTPQKRGEY MAB_4295c|M.abscessus_ATCC_199 IPFYEPGLRKILQSNIASGRLRFTTSYAEAAEFADVHFLGVGTPQKKGEY MSMEG_5982|M.smegmatis_MC2_155 VPFFEPGLSEVLRRHTSSGRLRFSSSYQEAAEFADVFFVAVATPQKKGDY MAV_4092|M.avium_104 AVIDEPGLSELLGDGLAGGVLRFSADFAELAD-RDVVFVCVPTPSAP-DG MUL_1511|M.ulcerans_Agy99 MPFIETGAEDLLKPLLPTGRISGSTDSQVVRN-SDIVICVVGTPVDEYLT : *.* : * : ::. *: : * ** Mflv_0289|M.gilvum_PYR-GCK AADLRHVYAVIDTLVPLLRRPAVIVGKSTVPVGTAAELVERAAGLAPDGV Mvan_0598|M.vanbaalenii_PYR-1 GADLRHVYAVIDTLVPLLTRPAVIVGKSTVPVGTAADLSERAAGLAPEGV TH_0768|M.thermoresistible__bu SADLTQVHAVVDTLVPRLRRPAVIVGKSTVPVGTARDLLERARRLAPTGV Mb0330|M.bovis_AF2122/97 GADLRHVHAVIDALVPRLVRASILVGKSTVPVGTAAELGHRAGALAPRGV Rv0322|M.tuberculosis_H37Rv GADLRHVHAVIDALVPRLVRASILVGKSTVPVGTAAELGHRAGALAPRGV MMAR_0603|M.marinum_M GADLRHIHAVIDTLVPRLTRTSVLIGKSTVPVGTAAELARRAAGLAVAGV MAB_4295c|M.abscessus_ATCC_199 GADLRHVHSVIDTLVPLLSRSAVIIGKSTVPVGTARELGQRAAGFAAAGV MSMEG_5982|M.smegmatis_MC2_155 GADLCFVDAVIDNLAPLLDKPSLIIGKSTVPVGTATRLGRCVRDLAPAGD MAV_4092|M.avium_104 HADLAAVESVIDRLGRVLRRGAVVALKSTVPVGTTSTMAQRLCHKG---- MUL_1511|M.ulcerans_Agy99 PQAHTFFR-VIDEISPYFHDGQTLILRSTVYPGLSQRVHDMFSERG---I . *:* : : : :*** * : : . Mflv_0289|M.gilvum_PYR-GCK TVEVAWNPEFLREGFAVQDTLHPDRIVLGVQK-DSRIAEPVLRELYAALL Mvan_0598|M.vanbaalenii_PYR-1 TVEVAWNPEFLREGFAVADTLHPDRIVLGVQR-DSQLAEPVLREMYAPLL TH_0768|M.thermoresistible__bu DVEVAWNPEFLREGFAVRDTLHPDRIVVGAPP-DSVRAEPMLRELYAPLL Mb0330|M.bovis_AF2122/97 DVEIAWNPEFLREGFAVHDTLNPDRIVLGVQD-DSTRAEVAVRELYAPLL Rv0322|M.tuberculosis_H37Rv DVEIAWNPEFLREGFAVHDTLNPDRIVLGVQD-DSTRAEVAVRELYAPLL MMAR_0603|M.marinum_M GVEIAWNPEFLREGFAVRDTLRPDRIVLGVQE-DSILAEQFVRELYGPLL MAB_4295c|M.abscessus_ATCC_199 DVEVAWNPEFLREGYAVKDTLHPDRIVLGVQR-DSDRAEKLVRELYGPIL MSMEG_5982|M.smegmatis_MC2_155 AVELVWNPEFLREGFAVQGTLHPDRLVLGVERPGSGRAEGIVREIYADLI MAV_4092|M.avium_104 -IRVVSTPEFLREGRAVDDFRNPDRLVIGSHD---ELAAQLVHQAYG--- MUL_1511|M.ulcerans_Agy99 GVHVTFCPERIAQGHSIRELRIIPQIISGFDA----EGLRVVRELFS--- :.:. ** : :* :: ::: * . ::: :. Mflv_0289|M.gilvum_PYR-GCK ADGAPFLVSDLQTAELAKVSANAFLATKISFINAISEVCEAVGADVTLLA Mvan_0598|M.vanbaalenii_PYR-1 AAGVPFLIADLQTAELVKVSANAFLATKISFINAISEVCEAVDADVTLLA TH_0768|M.thermoresistible__bu GDGVPWLSTDLQTAELVKVSANAFLATKISFINAISDVCEAVGADVVTLA Mb0330|M.bovis_AF2122/97 AAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSQLA Rv0322|M.tuberculosis_H37Rv AAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSQLA MMAR_0603|M.marinum_M EAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSLLA MAB_4295c|M.abscessus_ATCC_199 DEEVPFLVTDLETAELVKVSANAFLATKISFINAISEVCEAVGADVTTLA MSMEG_5982|M.smegmatis_MC2_155 NDGVPFIVTDLATAELVKVSANAFLATKISFINAIAEVCEAVDADVTVLA MAV_4092|M.avium_104 LAGHRVLRMSPESAELAKYASNAFLAVKLSYTNSLAALCARVGADIDDVT MUL_1511|M.ulcerans_Agy99 GIASEIIKVEPQEAELAKLFCNSYRYIQFAVANQFYLLSREAGQDFDRVH : . ***.* .*:: ::: * : :. .. *. : Mflv_0289|M.gilvum_PYR-GCK DALGHDARIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLRE Mvan_0598|M.vanbaalenii_PYR-1 DALGHDARIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANHALTFLRE TH_0768|M.thermoresistible__bu DALGHDPRIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANHTLTLLRE Mb0330|M.bovis_AF2122/97 DALGYDPRIGRQCLNAGLGFGGGCLPKDIRAFMARAGELGADQALTFLRE Rv0322|M.tuberculosis_H37Rv DALGYDPRIGRQCLNAGLGFGGGCLPKDIRAFMARAGELGADQALTFLRE MMAR_0603|M.marinum_M DALGYDTRIGRQCLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLRE MAB_4295c|M.abscessus_ATCC_199 DALGYDPRIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGASHALTFLRE MSMEG_5982|M.smegmatis_MC2_155 DAIGYDSRIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLRE MAV_4092|M.avium_104 CCMGADRRIGAEFLRPGPGWGGSCLPKDTAALLDIAHRH--RVSFAEVEA MUL_1511|M.ulcerans_Agy99 HATTYKNSRVDSLPRAGLAAG-PCLLKDTMQLAAFS-----NNNFMLGHS . . ..* . * ** ** : : : . Mflv_0289|M.gilvum_PYR-GCK VDSINMRRRTRMVELATTACGGSLLGANIAVLGAAFKPESDDVRDSPALN Mvan_0598|M.vanbaalenii_PYR-1 VDSINMRRRTRMVELATKACGGSLLGANVAVLGAAFKPESDDVRDSPALN TH_0768|M.thermoresistible__bu VDSINMRRRARMVELATTACGGSLLGANIAVLGAAFKPDSDDVRDSPALN Mb0330|M.bovis_AF2122/97 VDSINMRRRTKMVELATTACGGSLLGANIAVLGAAFKPESDDVRDSPALN Rv0322|M.tuberculosis_H37Rv VDSINMRRRTKMVELATTACGGSLLGANIAVLGAAFKPESDDVRDSPALN MMAR_0603|M.marinum_M VDSINMRRRTRMVELATTACGGSLLGANLAVLGAAFKPESDDVRDSPALN MAB_4295c|M.abscessus_ATCC_199 VDSINMRRRTRMVELATKACGGSLLGANVAVLGAAFKPESDDVRDSPALN MSMEG_5982|M.smegmatis_MC2_155 VDSINMRRRTRVVEIAREICGGGFIGSRVAVLGAAFKPDSDDVRDSPALN MAV_4092|M.avium_104 ARQTNTAQARRIVTALRHTLGRPLSGRRITALGLTFKAATSDTRESPALA MUL_1511|M.ulcerans_Agy99 AMLINEGQPQFIVNMLKRRVN--LRDKTVGILGMTFKADCDDTRDSLSFK . * : :* . : . : ** :**. .*.*:* :: Mflv_0289|M.gilvum_PYR-GCK VAGMLQLHGATVNVYDPKAMDNSRRLFP--TLNYSASALDACERADAVLV Mvan_0598|M.vanbaalenii_PYR-1 VAGMLQLNGATVNVYDPQAIENSRRLFP--TLNYATTVVEACDRADAVLV TH_0768|M.thermoresistible__bu VAGMLQLNGATVTVYDPKAMENSRRVFP--TLTYSTSVAEACDRADAVLV Mb0330|M.bovis_AF2122/97 VAGQLQLNGATVHVYDPKALDNAHRLFP--TLNYAVSVAEACERADAVLV Rv0322|M.tuberculosis_H37Rv VAGQLQLNGATVHVYDPKALDNAHRLFP--TLNYAVSVAEACERADAVLV MMAR_0603|M.marinum_M VAGQLQLNGAAVNVYDPKALDNANRLFP--TLNYAVSVAEACERADAVLI MAB_4295c|M.abscessus_ATCC_199 VAGLLQLNGAAVNVYDPKALENSRRLFP--TLNYATSVLEAADRADAVLL MSMEG_5982|M.smegmatis_MC2_155 VAGQIQLQGACVNVFDPQAMDNSRTLFP--TLNYATSAFEACDGADVVLV MAV_4092|M.avium_104 ACRELAAAGAQVAGYDPQLPNIDPAVLQQNRVTAVDDPYRAAKAADAVVV MUL_1511|M.ulcerans_Agy99 LRHLLMLEAKEVILHDPFLEGKDYHPLQ-----------TVVDRSDVIVV : . * .** : . . :*.::: Mflv_0289|M.gilvum_PYR-GCK LTEWSEFVGMHPDELSAAVRTKVIVDGRNCLDIGVWRDAGWQVHALGRTV Mvan_0598|M.vanbaalenii_PYR-1 LTEWREFVELDPVLLADTVRAKVVVDGRNCLDVGRWQQAGWQVFALGRFG TH_0768|M.thermoresistible__bu LTEWQEFIDLNPAELADIVRAKVIVDGRNCLDVRRWQRAGWKVFCLGRTP Mb0330|M.bovis_AF2122/97 LTEWREFIDLEPADLANRVRARVIVDGRNCLDVTRWRRAGWRVFRLG--V Rv0322|M.tuberculosis_H37Rv LTEWREFIDLEPADLANRVRARVIVDGRNCLDVTRWRRAGWRVFRLG--V MMAR_0603|M.marinum_M LTEWQEFVDLDPDDLADRVRARVIVDGRNCLDVSRWERAGWRVFRLG--A MAB_4295c|M.abscessus_ATCC_199 LTEWQEFVDFDPDALAKVVRTKVIVDGRNCLDAAKWVNAGWRVFCLGKRV MSMEG_5982|M.smegmatis_MC2_155 LTEWEEFRSIDPAELKTTVRSAAVIDGRNCLDAAAWCAAGWYYRALGRPA MAV_4092|M.avium_104 LTEWPQFRSLDWRAVAQDAPLAVVLDARNSLDPATVREAGLRYLGNGVPQ MUL_1511|M.ulcerans_Agy99 GVPHSAYRGLR------VPRGKVVEDVWGCLDVTEFDVDPCNGANLAELG . : : .: * ..** . Mflv_0289|M.gilvum_PYR-GCK EVGA-------- Mvan_0598|M.vanbaalenii_PYR-1 GEPAAA------ TH_0768|M.thermoresistible__bu ------------ Mb0330|M.bovis_AF2122/97 PRLGH------- Rv0322|M.tuberculosis_H37Rv PRLGH------- MMAR_0603|M.marinum_M RIRAAS------ MAB_4295c|M.abscessus_ATCC_199 EELAHT------ MSMEG_5982|M.smegmatis_MC2_155 APRGANASVVTK MAV_4092|M.avium_104 GF---------- MUL_1511|M.ulcerans_Agy99 TAAAR-------