For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KADPSGLDKAPGAGRPRDPRIDSAILSATAELLVQTGYSNISLAAVAERAGTTKSALYRRWSSKAELVHE AAFPTAPTALEAPAGDIAADMRMMIEATRDVFTTPVVRAALPGLVADMTADPALNARVMSRFADLFTAVR VRLGEAVDRGEAHPDVDPDRLIELIGGATMLRMLLRPEEELDDAWVEQTTAIVVHGVRR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_4057 | - | - | 100% (200) | transcriptional regulator, TetR family protein |
| M. avium 104 | MAV_5165 | - | 3e-46 | 49.19% (185) | transcriptional regulator, TetR family protein |
| M. avium 104 | MAV_5267 | - | 1e-13 | 30.15% (199) | transcriptional regulator, TetR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3192c | - | 3e-95 | 88.00% (200) | TetR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_4496 | - | 1e-72 | 66.16% (198) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv3167c | - | 3e-95 | 88.00% (200) | TetR family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0260 | - | 5e-20 | 35.06% (174) | transcriptional regulator TetR |
| M. marinum M | MMAR_1394 | - | 5e-92 | 83.00% (200) | TetR family transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_2043 | - | 1e-75 | 70.20% (198) | transcriptional regulator, TetR family protein |
| M. thermoresistible (build 8) | TH_0688 | - | 3e-57 | 53.00% (200) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
| M. ulcerans Agy99 | MUL_2482 | - | 9e-92 | 82.50% (200) | TetR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_1870 | - | 1e-74 | 68.18% (198) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4496|M.gilvum_PYR-GCK MKTDSSAGGKATGAGRPRDPRIDAAILAATADLLVEIGYSNVTMAAVAER
Mvan_1870|M.vanbaalenii_PYR-1 MNTDPSPGDKTPGAGRPRDPRIDAAILRATADLLVEIGYSNVTMAAVAER
Mb3192c|M.bovis_AF2122/97 MKADLPSLDKAPGAGRPRDPRIDSAILSATAELLVQIGYSNLSLAAVAER
Rv3167c|M.tuberculosis_H37Rv MKADLPSLDKAPGAGRPRDPRIDSAILSATAELLVQIGYSNLSLAAVAER
MAV_4057|M.avium_104 MKADPSGLDKAPGAGRPRDPRIDSAILSATAELLVQTGYSNISLAAVAER
MMAR_1394|M.marinum_M MKADPSSLDKAPGAGRPRDPRIDFAILSATMELLVQIGYSNLSLAAVAER
MUL_2482|M.ulcerans_Agy99 MKADPSSLDKAPGAGRPRDPRIDFAILSATMELLVQIGYSNLSLAAVAER
MSMEG_2043|M.smegmatis_MC2_155 MKAEASPLGKGVGAGRPRDPRIDAAILRATAELLVEIGYANLTMAAVAER
TH_0688|M.thermoresistible__bu MTTNSTSVDKAAGAGRPRDPRIDGAILRATADLLVEIGYSNLTMSAVAER
MAB_0260|M.abscessus_ATCC_1997 MSTEESS----LGRGRRRSSDIDVKALAAARELLVEQGWEATTMVAIADR
*.:: . * ** *.. ** * *: :***: *: :: *:*:*
Mflv_4496|M.gilvum_PYR-GCK AGTTKTALYRRWSSKAELVHEAAFP-VTPTAIQSPPGDIAADLRAMIEVT
Mvan_1870|M.vanbaalenii_PYR-1 AGTTKTALYRRWSSKAELVHEAAFP-VTPTAIQTPPGDIAADLRAMIEAA
Mb3192c|M.bovis_AF2122/97 AGTTKSALYRRWSSKAELVHEAAFP-AAPTALQAAAGDIAADIRMMIAAT
Rv3167c|M.tuberculosis_H37Rv AGTTKSALYRRWSSKAELVHEAAFP-AAPTALQAAAGDIAADIRMMIAAT
MAV_4057|M.avium_104 AGTTKSALYRRWSSKAELVHEAAFP-TAPTALEAPAGDIAADMRMMIEAT
MMAR_1394|M.marinum_M AGTTKSALYRRWSSKAELVHEAAFP-VTPSALSAPAGDFAGDIRMMVAAT
MUL_2482|M.ulcerans_Agy99 AGTTKSALYRRWSSKAELVHEAAFP-VTPSALSAPAGDFAGDIRMMVAAT
MSMEG_2043|M.smegmatis_MC2_155 AQTTKTALYRRWSSKAELVHEAVFP-AVPTGLVAPAGDIAADVHAMIAAA
TH_0688|M.thermoresistible__bu AGTTKTALYRRWSSKPELVYAATAP-TDPVDTVESSDDVAGIVRALIERN
MAB_0260|M.abscessus_ATCC_1997 ASVGKPALYRRWPSRAHLVFEAVFGWTAPTPEMSAAAGVTDWVRQSCSYT
* . *.******.*:..**. *. . * .. ..: ::
Mflv_4496|M.gilvum_PYR-GCK RDVFLSPVVRAALPGLIADMSANADLTGRIGARFTDLFAAVRARLQDAVE
Mvan_1870|M.vanbaalenii_PYR-1 RDVFTSPVVRSALPGLIADLSADADLAGRVGARFTDLFAAVRNRLHDAVE
Mb3192c|M.bovis_AF2122/97 RDVFTTPVVRAALPGLVADMTADAELNARVLARFADLFAAVRMRLREAVD
Rv3167c|M.tuberculosis_H37Rv RDVFTTPVVRAALPGLVADMTADAELNARVLARFADLFAAVRMRLREAVD
MAV_4057|M.avium_104 RDVFTTPVVRAALPGLVADMTADPALNARVMSRFADLFTAVRVRLGEAVD
MMAR_1394|M.marinum_M RDVFTTPVVRAALPGLVADMTADADLNARVLSRFTELFATVRIRLQEAVD
MUL_2482|M.ulcerans_Agy99 RDVFTTPVVRAALPGLVADMTAEADLNARVLSRFTELFATVRIRLQEAVD
MSMEG_2043|M.smegmatis_MC2_155 RDVFTSPVVRAALPGLIADVSADANLNARVMERFTGVFAAVRERIVDGIA
TH_0688|M.thermoresistible__bu RQITATPAARAAMPGLLVDMAADPRLHRGLLGRVGSLVEALRRRLAEAAG
MAB_0260|M.abscessus_ATCC_1997 AELFERPDVIAAAPALLGQMRTDPELGQALWGSFGATGAGLLSRVMRAQQ
:: * . :* *.*: :: ::. * : . : *: .
Mflv_4496|M.gilvum_PYR-GCK R--GEVRESVDPDRLVSLVGGATLLALLQTPDALASPSWVDSTTDILLRG
Mvan_1870|M.vanbaalenii_PYR-1 R--GEVRAGVDPDQLVNLIGGATLLALLQAPDDLTAPAWVDRTTDILLHG
Mb3192c|M.bovis_AF2122/97 R--GEAHPDVDPDRLIELIGGATMLRMLLYPDDMLDDAWVDQTTAIVVRG
Rv3167c|M.tuberculosis_H37Rv R--GEAHPDVDPDRLIELIGGATMLRMLLYPDDMLDDAWVDQTTAIVVRG
MAV_4057|M.avium_104 R--GEAHPDVDPDRLIELIGGATMLRMLLRPEEELDDAWVEQTTAIVVHG
MMAR_1394|M.marinum_M R--GEAHPDVDPNRMIELIGGATMLRVLLYPDQMLDEAWVDQTTAILVHG
MUL_2482|M.ulcerans_Agy99 R--GEAHPDVDPNRMIELIGGATMLRVLLYPDQMLDEAWVDQTTAILVHG
MSMEG_2043|M.smegmatis_MC2_155 R--GEVHAAVSPDRLVEIIGGATMLRLLLVSDENLDDEWVHQTAAIVIHG
TH_0688|M.thermoresistible__bu R--GEVQSGVDADRLTELIGGSVMFRMVLHPDEPITERWADEVAAILIRG
MAB_0260|M.abscessus_ATCC_1997 PEIGQEEAQERANAIMFMIIGANMLARQLLPGEHAEAVIKHLPELLTEPG
*: . .: : :: *: :: . . : *
Mflv_4496|M.gilvum_PYR-GCK VVAGA------
Mvan_1870|M.vanbaalenii_PYR-1 VMA--------
Mb3192c|M.bovis_AF2122/97 VHRAAPGGSVV
Rv3167c|M.tuberculosis_H37Rv VHRAAPGGSVV
MAV_4057|M.avium_104 VRR--------
MMAR_1394|M.marinum_M VTR--------
MUL_2482|M.ulcerans_Agy99 VTR--------
MSMEG_2043|M.smegmatis_MC2_155 VTVGR------
TH_0688|M.thermoresistible__bu VTKEG------
MAB_0260|M.abscessus_ATCC_1997 ESPGSVRPSG-