For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSTFDSSSLYWATAVVFGLPLLLIVLTEWHQSLVRKHSPLARPAFLLRSYLIPLGALLVLLVNVARMPAQ FTSVRVLATAFGFVVVVLLLSGLNATIFEGAPEGSWRQRVPGIFLDVTRFVLIGVGLAVIFSYVWGVRVG GLFTALGVTSVVIGLMLQNSVGQIVSGLFMLFEQPFRIGDWLDTPAARGRIVEANWRSVHIQTGHGLQIT PNSVLATTSFTNLSRPPGGHQLTLTATFSETDPPDRVCALLRRVADALPQRRPDAVAAAVPAGGGEYHVT IGLTSPADDSAAQATLLRWLWYGARREGLRLDGAEDDISTPERIERALRMVVAPALRLGPPDQQALVSHA RIVRYGADEIVEHAGRVPEKMTFLLAGGVRLTATAPDGSVVAVGGLDEGSFLGVTALTRQPNLADAQAVA EVTALEIDREHLVELVTGKPLLLQDLGRTIDERRALVHRAVTAEPTPSREPVS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3202 | - | - | 100% (473) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2460c | - | 1e-173 | 64.86% (461) | transmembrane protein |
M. gilvum PYR-GCK | Mflv_2744 | - | 1e-05 | 34.57% (81) | MscS mechanosensitive ion channel |
M. tuberculosis H37Rv | Rv2434c | - | 1e-173 | 64.86% (461) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1411 | - | 9e-06 | 25.00% (208) | putative mechanosensitive ion channel |
M. marinum M | MMAR_3754 | - | 1e-170 | 65.36% (459) | hypothetical protein MMAR_3754 |
M. smegmatis MC2 155 | MSMEG_3579 | - | 1e-156 | 58.32% (463) | transmembrane protein |
M. thermoresistible (build 8) | TH_2299 | - | 1e-149 | 57.17% (460) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_3697 | - | 1e-169 | 64.92% (459) | hypothetical protein MUL_3697 |
M. vanbaalenii PYR-1 | Mvan_3795 | - | 9e-06 | 34.57% (81) | MscS mechanosensitive ion channel |
CLUSTAL 2.0.9 multiple sequence alignment Mb2460c|M.bovis_AF2122/97 ------MNLLDSTWFYWAVGIAIGLPAGLIVLTELHNILVRRNSHLARQA Rv2434c|M.tuberculosis_H37Rv ------MNLLDSTWFYWAVGIAIGLPAGLIVLTELHNILVRRNSHLARQA MMAR_3754|M.marinum_M ------MSVFGSAWFYWAVGIAAALPVLVVILTEVQRLLRRRQSALARQV MUL_3697|M.ulcerans_Agy99 ------MSVFGSAWFYWAVGIAAALPVLVVILTEVQRLLRRRQSALARQV MAV_3202|M.avium_104 ------MSTFDSSSLYWATAVVFGLPLLLIVLTEWHQSLVRKHSPLARPA MSMEG_3579|M.smegmatis_MC2_155 -----MRSVLEANWFYWALSVAVGLPIGLVLLTELHNTLARHGSYLARPV TH_2299|M.thermoresistible__bu -----VSLALDGAWLYWAIGVAVGFPAALILLTELHDAMVRRNSIMARPV Mflv_2744|M.gilvum_PYR-GCK MDVSSLAFEWTDTSRHWLIEVPIRIVVYIAVALVIRYLVHRMIDRATTGR Mvan_3795|M.vanbaalenii_PYR-1 MDVSLLAFEWTDTSRHWLIEVPIRIVAYLTVALVIRFVVHRMIDRATTSR MAB_1411|M.abscessus_ATCC_1997 --MSDLAIQLSESGRDWLIHRPVDIAIYVVLALAVRYVLHRAIDRLVQGA * : : : : : * . . Mb2460c|M.bovis_AF2122/97 SLLRNYLLPLGAVLLLLVKASEVPAEDPTVRVLTTAFGFLVLVLLLSLLN Rv2434c|M.tuberculosis_H37Rv SLLRNYLLPLGAVLLLLVKASEVPAEDPTVRVLTTAFGFLVLVLLLSLLN MMAR_3754|M.marinum_M GLLRNYVLPLGALLLLMVNATGVPAHDTAVRLLATVFGFLVLVLLLSGLN MUL_3697|M.ulcerans_Agy99 GLLRNYVLPLGALLLLLVNATGVPAHDTAVRLLATVFGFLVLVLLLSGLN MAV_3202|M.avium_104 FLLRSYLIPLGALLVLLVNVARMPAQFTSVRVLATAFGFVVVVLLLSGLN MSMEG_3579|M.smegmatis_MC2_155 SLLRNYILPLAALLILLVKGSEISAEATPVRIVATGFGFVVIILLLSGLN TH_2299|M.thermoresistible__bu QLLRNYLLPLAALLILLVQAVEVSTEATPVRIVATAFSFAVLILLLSGLN Mflv_2744|M.gilvum_PYR-GCK TR----------------KNRGGGE---DARPQRTPPLVRRLRDRVPSST Mvan_3795|M.vanbaalenii_PYR-1 TR----------------KDK-------DAAGARTPPLVRKLRDRVPSSA MAB_1411|M.abscessus_ATCC_1997 RRPESAEHPRRQWWAFLRRGRDLGESDRLDETARLPARTRTLRGRAQDPA . : Mb2460c|M.bovis_AF2122/97 ATLFQGAPQQSWRKRLPAIFVDVARFALIGIGLAVILSYIWGVRVGGLFA Rv2434c|M.tuberculosis_H37Rv ATLFQGAPQQSWRKRLPAIFVDVARFALIGIGLAVILSYIWGVRVGGLFA MMAR_3754|M.marinum_M AAVFSGAPQGSWRRRLPVIFVDVARFVLIGAGLAVILSFVWGVRIGGLFT MUL_3697|M.ulcerans_Agy99 AAVFSGAPQGSWRRRLPVIFVDVARFVLIGAGLAVILSFVWGVRIGGLFT MAV_3202|M.avium_104 ATIFEGAPEGSWRQRVPGIFLDVTRFVLIGVGLAVIFSYVWGVRVGGLFT MSMEG_3579|M.smegmatis_MC2_155 ATLFQGAPEGSWRKRIPSIFLDVARFALIAVGVGMIMAYVWGANVGGLFT TH_2299|M.thermoresistible__bu ATLFHGAPEDTWRKRIPTIFVDVARFALIAVGLALILAYIWGANVGGLFT Mflv_2744|M.gilvum_PYR-GCK TSEQIIARRQQRAQTIGSVLKSTVSIVLLVWVVLAVLN-VVGVNIAPFIA Mvan_3795|M.vanbaalenii_PYR-1 SSEQVIARRQQRAQTIGSVLKSTVSIVLLVWVVLAVLN-VLGVNIAPFIA MAB_1411|M.abscessus_ATCC_1997 RDARRRKRRAQRAQTLGSVLKSAVSFLVLVWVILQSLA-ILGVNVAPFIA . : : :: ... : :: : : : *..:. ::: Mb2460c|M.bovis_AF2122/97 ALGVTSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDDWLETPTARGRVVEV Rv2434c|M.tuberculosis_H37Rv ALGVTSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDDWLETPTARGRVVEV MMAR_3754|M.marinum_M ALGVTSVVIGLMLQNSVSQIVSGLFMLFEQPFQIDDWLDTTTTRGRIVEV MUL_3697|M.ulcerans_Agy99 ALGVTSVVIGLMLQNSVSQIVSGLFMLFEQPFQIDDWLDTTTTRGRIVEV MAV_3202|M.avium_104 ALGVTSVVIGLMLQNSVGQIVSGLFMLFEQPFRIGDWLDTPAARGRIVEA MSMEG_3579|M.smegmatis_MC2_155 ALGVTSIVLGLALQNAVGQIISGLLLLFEQPFQLGDWLDTPSARGRVVEV TH_2299|M.thermoresistible__bu ALGVSSIVLGLALQNAVGQIVSGLLVLFEQPFQIGDWVDTPSARGKVVEV Mflv_2744|M.gilvum_PYR-GCK SAGVVGLAIGFGAQNLVRDFVTGVFMLLEDQYGVGDTVDLGEAVGEVESV Mvan_3795|M.vanbaalenii_PYR-1 SAGVVGLAIGFGAQNLVRDFVTGVFMLLEDQYGVGDTVDLGEAVGEVESV MAB_1411|M.abscessus_ATCC_1997 SAGIVGVALGFGAQNLVRDFITGIFMLFEDQYGVGDVVDVGDAVGTVESV : *: .:.:*: ** * ::::*:::*:*: : :.* :: : * : .. Mb2460c|M.bovis_AF2122/97 NWRAVHIDTGSGLQIMPNSMLATTAFTNLSRPAGAHECSITTTFSTSDPP Rv2434c|M.tuberculosis_H37Rv NWRAVHIDTGSGLQIMPNSMLATTAFTNLSRPAGAHECSITTTFSTSDPP MMAR_3754|M.marinum_M NWRAVHIETGSGLRITPNSVLASTPFTNLSRPAGAYQLAIPTKFSDADAP MUL_3697|M.ulcerans_Agy99 NWRAVRIETGSGLRITPNSVLASTPFTNLSRPAGAYQLAIPTKFSDADAP MAV_3202|M.avium_104 NWRSVHIQTGHGLQITPNSVLATTSFTNLSRPPGGHQLTLTATFSETDPP MSMEG_3579|M.smegmatis_MC2_155 NWRATHIDTGGGLQIMPNSVLAGASFTNLSRPEAAHSLSVTTTFGVSDSP TH_2299|M.thermoresistible__bu NWRATHIDTGGGLRVIPNSELADASFTNLSRPPGTHTITVPTVFAGGDAP Mflv_2744|M.gilvum_PYR-GCK GLRITTVRDIDGT------------------------------------- Mvan_3795|M.vanbaalenii_PYR-1 GLRITTVRDIDGT------------------------------------- MAB_1411|M.abscessus_ATCC_1997 GLRITTVRDLQGT------------------------------------- . * . : * Mb2460c|M.bovis_AF2122/97 DKVCAMLNRAASALPHVKPGVVPATIARGAAEYRTTVRLTSPADEGPTQA Rv2434c|M.tuberculosis_H37Rv DKVCAMLNRAASALPHVKPGVVPATIARGAAEYRTTVRLTSPADEGPTQA MMAR_3754|M.marinum_M DRVCALLSRVAAALPQLDGGFLVTTEPVGGTEYCTTIGLRSPAEESAARA MUL_3697|M.ulcerans_Agy99 DRVCALLSRVAAALPQLDGGFLVTTEPVGGTEYCTTIGLRSPAEESAARA MAV_3202|M.avium_104 DRVCALLRRVADALPQRRPDAVAAAVPAGGGEYHVTIGLTSPADDSAAQA MSMEG_3579|M.smegmatis_MC2_155 DAVCALLTRVATQLPQRRAGAAPKAIPLGAGEYKTSIPLRTPADDSAARA TH_2299|M.thermoresistible__bu DQVCAMLTRVAANLPQLLPGAEPSAAPAGRGEYRTSIPLRTPADDATARS Mflv_2744|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3795|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_1411|M.abscessus_ATCC_1997 -------------------------------------------------- Mb2460c|M.bovis_AF2122/97 TFLRWVWYAARREGLHLDEADDEFSTAERVESALRTVVGPELRLSSSDQQ Rv2434c|M.tuberculosis_H37Rv TFLRWVWYAARREGLHLDEADDEFSTAERVESALRTVVGPELRLSSSDQQ MMAR_3754|M.marinum_M TFLRWIWYAARREGLHLNGADDDFSTTERVQHALKTVVAPVMRLSDTDQQ MUL_3697|M.ulcerans_Agy99 TFLRWIWYAARREGLHLNGADDDFSTTERVQHALKTVVAPVMRLSDTDQQ MAV_3202|M.avium_104 TLLRWLWYGARREGLRLDGAEDDISTPERIERALRMVVAPALRLGPPDQQ MSMEG_3579|M.smegmatis_MC2_155 VFLRWLWYAARRAELHLDGETDDFSTPERLTKAVR-QMAPTLRLSHTEQQ TH_2299|M.thermoresistible__bu TFLRWVWYAARRAGLHLDRSTDDFVTTERLTTALA-AIAPALRLSEAEQQ Mflv_2744|M.gilvum_PYR-GCK -----LWYVRNGEIARVGNMSQEYAVAR---------------------- Mvan_3795|M.vanbaalenii_PYR-1 -----LWYVRNGEIARVGNMSQEYAVAR---------------------- MAB_1411|M.abscessus_ATCC_1997 -----LWYVRNGGIARVGNFSQDYAVAF---------------------- :** . ::. :: .. Mb2460c|M.bovis_AF2122/97 SLARYARLVRYGTDEIVQHAGVVPMGITFVIAGSVRLTVTTDDGSVVAIA Rv2434c|M.tuberculosis_H37Rv SLARYARLVRYGTDEIVQHAGVVPMGITFVIAGSVRLTVTTDDGSVVAIA MMAR_3754|M.marinum_M ALLSSARIIRFAAGETMEYAGQVPAGMTFLITGRVRLTATAEDGSVVPVT MUL_3697|M.ulcerans_Agy99 ALLSSARIIRFAAGDTMEYAGQVPAGMTFLITGRVRLTATAEDGSIVPVT MAV_3202|M.avium_104 ALVSHARIVRYGADEIVEHAGRVPEKMTFLLAGGVRLTATAPDGSVVAVG MSMEG_3579|M.smegmatis_MC2_155 EVLNHSALVRFGADEIIQEAGEIPTRMSFIVSGRVGVSVAGDGDAVIPVR TH_2299|M.thermoresistible__bu DLLPRAGIARYGAGEPIQVAGEVPSHMTFVVRGRVRVVAPLADGSAVEVR Mflv_2744|M.gilvum_PYR-GCK ----------------IEVPVALSADIERAEQVAVEAAEAAVAEKSLAGK Mvan_3795|M.vanbaalenii_PYR-1 ----------------IEVPVALTADVDRAEQVAHEAAQEAVADPALAGK MAB_1411|M.abscessus_ATCC_1997 ----------------LQIPLSYSADVDLACTIALEAAREAVAEEALRDD :: . . : : Mb2460c|M.bovis_AF2122/97 TLKKGTFLGLTALTRQPDPAGAVALEEVTALQIGREHLEQVVMNKPMLLQ Rv2434c|M.tuberculosis_H37Rv TLKKGTFLGLTALTRQPDPAGAVALEEVTALQIGREHLEQVVMNKPMLLQ MMAR_3754|M.marinum_M TLHEGGFLGLTALTRQPNLAGAHALDEVTALEVDREHLEHLVMREPLLLQ MUL_3697|M.ulcerans_Agy99 TLHEGGFLGLTALTRQPNLAGAHALDEVTALEVDREHLEHLVMREPLLLQ MAV_3202|M.avium_104 GLDEGSFLGVTALTRQPNLADAQAVAEVTALEIDREHLVELVTGKPLLLQ MSMEG_3579|M.smegmatis_MC2_155 TLTENDFLGQTALTREGALASAHALTETTVLQISREFLEELVAGNPLLLL TH_2299|M.thermoresistible__bu IAGPGDFLGQSTLTREPVSTSAYAVDEVTVVELERTVLEDLVTRKPVLLQ Mflv_2744|M.gilvum_PYR-GCK VLGEPEMLGVQELS-----PDLIKLRMTVKVRPNAQWAVQRRLRRAILQA Mvan_3795|M.vanbaalenii_PYR-1 VIGEPEMLGVQELS-----PDLIKLRMTVKVRPNAQWAVQRKLRRAILRA MAB_1411|M.abscessus_ATCC_1997 VIGAPEMLGIDGIT-----ADAISLRLTVAVRANAQWAVERELRRRILIA :** :: .. : .. :. . . :* Mb2460c|M.bovis_AF2122/97 ELGRVIDERQRKAQQAIRRDLHQSPAAAGEHRGPARR Rv2434c|M.tuberculosis_H37Rv ELGRVIDERQRKAQQAIRRDLHQSPAAAGEHRGPARR MMAR_3754|M.marinum_M DFGHILEERQSKVRRVGGLN----------------- MUL_3697|M.ulcerans_Agy99 DFGHILEERQSKVRRVGGLN----------------- MAV_3202|M.avium_104 DLGRTIDERRALVHRAVTAEPTPSREPVS-------- MSMEG_3579|M.smegmatis_MC2_155 ELSRIIDDRRSAARAALTAD----------------- TH_2299|M.thermoresistible__bu DIGRAIEERRLMARRAVTTQR---------------- Mflv_2744|M.gilvum_PYR-GCK YDEHGIALPYPNGRVHAVGE----------------- Mvan_3795|M.vanbaalenii_PYR-1 YDEHGIDLPYPGGRMQVAAASE--------------- MAB_1411|M.abscessus_ATCC_1997 FDENGIRPLYLDGLSSGTVETLEKASR---------- . :