For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTLAHTAALVTGASSGIGAATATALAAEGAAVALLARRADRLAELQAEIECSGGTALVVPADVTDAERVA AAVQRTVAEFGRLDILVNNAGLMQSGPATEASLRDWDRMVAVNVQGVLYATRAALPHLVDAAADSPRGVA DLVTISSTAGWVARPNTAVYSLTKFGVNAFSEGIRQEVLGKRVRVGVVGPGTVDTEIFGHLSEPSREAFE RQTAGMVMLRPQDIADAVLFMVTRDRRVAVNHMLVRAAEQTW*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2980 | - | - | 100% (253) | clavaldehyde dehydrogenase |
M. avium 104 | MAV_4667 | - | 2e-32 | 38.93% (244) | oxidoreductase |
M. avium 104 | MAV_2700 | - | 4e-31 | 38.30% (235) | short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0494c | - | 3e-33 | 38.58% (254) | putative short-chain type oxidoreductase |
M. gilvum PYR-GCK | Mflv_0088 | - | 9e-31 | 37.90% (248) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv0484c | - | 3e-33 | 38.58% (254) | short-chain type oxidoreductase |
M. leprae Br4923 | MLBr_01094 | - | 5e-24 | 33.16% (196) | short chain alcohol dehydrogenase |
M. abscessus ATCC 19977 | MAB_4060 | - | 2e-33 | 39.34% (244) | putative short chain dehydrogenase/reductase |
M. marinum M | MMAR_0810 | - | 4e-31 | 37.05% (251) | short-chain type oxidoreductase |
M. smegmatis MC2 155 | MSMEG_5569 | - | 7e-67 | 55.02% (249) | clavaldehyde dehydrogenase |
M. thermoresistible (build 8) | TH_4266 | - | 2e-30 | 34.60% (237) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_4554 | - | 1e-31 | 37.05% (251) | short-chain type oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_3063 | - | 2e-37 | 37.34% (241) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment MAV_2980|M.avium_104 --MT-TLAHTAALVTGASSGIGAATATALAAEGAAVALLARRADRLAELQ MSMEG_5569|M.smegmatis_MC2_155 --MSPKLTGTVALVTGASSGIGAATARHLAEHGATVALVARRKDRLVTLV Mvan_3063|M.vanbaalenii_PYR-1 -MVNDPIDGMVVAITGASSGIGEATARLLGTRGARLVLGARRADRLHTLG Mb0494c|M.bovis_AF2122/97 -MTTIGTRKRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALA Rv0484c|M.tuberculosis_H37Rv -MTTIGTRKRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALA MMAR_0810|M.marinum_M -MTTTDAGNRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALT MUL_4554|M.ulcerans_Agy99 -MTTTDAGNRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALT MAB_4060|M.abscessus_ATCC_1997 -MTNPTFDGRVAVVTGASSGIGAATAKSLAALGFHVVVAARREDRVKSLA Mflv_0088|M.gilvum_PYR-GCK -MTTPSDARRVAVVTGASAGIGEAIARTLAAQGFHVICVARREGPIKALA MLBr_01094|M.leprae_Br4923 ---MEGFAGKVAVVTGAGSGIGQALAIELARSGAKLAISDVDGEGLAQTE TH_4266|M.thermoresistible__bu VDDRFSMAGRVAVITGGGTGIGRASALVLAEYGADIVLAGRRPEPLKKTA .. :**..:*** * * *. * : : MAV_2980|M.avium_104 AEIECSGGTALVVPADVTDAERVAAAVQRTVAEFGRLDILVNNAG-LMQS MSMEG_5569|M.smegmatis_MC2_155 ADIERDGGAATAVEADVSDRAQADAAVAETVQRFGRLDIVVNNAG-LMLL Mvan_3063|M.vanbaalenii_PYR-1 GELRAAGAEVATVTTDVTAAGDLERLVGTAVADFGRLDVLVSNAG-ISAI Mb0494c|M.bovis_AF2122/97 NQIGG-----TAIVADVTDDAAVEALARA----LSRVDVLVNNAGGAKGL Rv0484c|M.tuberculosis_H37Rv NQIGG-----TAIVADVTDDAAVEALARA----LSRVDVLVNNAGGAKGL MMAR_0810|M.marinum_M DQIGG-----TPIVADVTDGAAVAALADG----LSRVDVLVNNAGGAKGL MUL_4554|M.ulcerans_Agy99 DQIGG-----TPIVADVTDGAAVAALADG----LSRVDVLVNNAGGAKEL MAB_4060|M.abscessus_ATCC_1997 GEIGG-----TAFVLDVTDADSVAALTQS----LDRVDVLVNNAGGAWGL Mflv_0088|M.gilvum_PYR-GCK AEIDG-----TAIVADVTDPTAVAALAGR----LDRVDVLVNNAGGARGL MLBr_01094|M.leprae_Br4923 GQLKAIGASARTDRLDVTEREAFLTYADVVHENFGKVNQIYNNAG-IAFT TH_4266|M.thermoresistible__bu AEIEALGRRALAVPTDVTAPDECRALVDATVGEFGRLDVLVNNAG-GGAT :: **: . :.::: : .*** MAV_2980|M.avium_104 GPATEASLRDWDRMVAVNVQGVLYATRAALPHLVDAAADSPRGVADLVTI MSMEG_5569|M.smegmatis_MC2_155 GPVAGADAQDWDRMIAVNVSGLLNTTHAALPHLLAAAEDGPREVADIVNV Mvan_3063|M.vanbaalenii_PYR-1 GPLADADVTGWDAMIDVNLRGVLHGIAAAMPVFRQQGHG------HFVTT Mb0494c|M.bovis_AF2122/97 QFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSGDG------LIVTV Rv0484c|M.tuberculosis_H37Rv QFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSGDG------LIVTV MMAR_0810|M.marinum_M EPVADADLEHWRWMWETNVLGTLRVTRALLPKLIASGDG------LIVTV MUL_4554|M.ulcerans_Agy99 EPVADADLEHWRWMWETNVLGTLRVTRALLPKLIASGDG------LIVTV MAB_4060|M.abscessus_ATCC_1997 EPVLEADLEHWRWMWETNVVGTLQVTRALLPKLIDSGDG------LIVTV Mflv_0088|M.gilvum_PYR-GCK ESISDADVENWRWMWEANVMGTLHVTRALLPKLIDSGDG------LIVTI MLBr_01094|M.leprae_Br4923 GDVEVSHFKDIERVMDVDYWGVVNGTKAFLPYLISSGDG------HVINI TH_4266|M.thermoresistible__bu KPLMKWTDDEWHEVLNLNLSSAWYLSRAAAKPMIDQGRG------AIVNI : : . * : . . .:. MAV_2980|M.avium_104 SSTAGWVARPNTAVYSLTKFGVNAFSEGIRQEV--LGKRVRVGVVGPGTV MSMEG_5569|M.smegmatis_MC2_155 SSVAGRNASEGYGVYSLTKFGVNGFTESLRQEV--TRRHVRVGVIEPGGV Mvan_3063|M.vanbaalenii_PYR-1 VSTAGLKIVPTMGVYAATKNAVRTMMEALRQES--TDGVIRTTSISPGYV Mb0494c|M.bovis_AF2122/97 TSIAALEVYDGGAGYTAAKHAQGALHRTLRGEL--LGKPVRLTEIAPGAV Rv0484c|M.tuberculosis_H37Rv TSIAAIEVYDGGAGYTAAKHAQGALHRTLRGEL--LGKPVRLTEIAPGAV MMAR_0810|M.marinum_M TSIAALEIYDGGAGYTAAKHAQGALHRTLRGEL--LGLPVRLTEIAPGAV MUL_4554|M.ulcerans_Agy99 TSIAALEIYDGGAGYTAAKHAQGALHRTLRGEL--LGLPVRLTEIAPGAV MAB_4060|M.abscessus_ATCC_1997 TSIAALDVYDGGSGYTSAKHAQAALHRTLRGEL--LGKPVRLTEVAPGAV Mflv_0088|M.gilvum_PYR-GCK TSIAAVEIYDNGGGYTSAKHAQGVLHRTLRSEL--LGKPVRLTEVAPGMV MLBr_01094|M.leprae_Br4923 SSVFGLFSVPGQAAYNSAKFAVRGFTEALREEMALAGRPVNVTTVYPGGI TH_4266|M.thermoresistible__bu SSGAGLLAMPQAPVYAAAKAGLNNLTGSMAAAW--TRKGVRVNCIACGAI * . * :* . : : :. : * : MAV_2980|M.avium_104 DTEIFGHLSEPSRE----AFERQTAGMVMLRPQDIADAVLFMVTRD---- MSMEG_5569|M.smegmatis_MC2_155 NTELGSHNSSAIQAR---IIEPFNASVEALAPEDVAESIGYMVTRP---- Mvan_3063|M.vanbaalenii_PYR-1 NTELDRSITDVALR----NAVRADMDAFGLAPEAVARAIVFAIEQP---- Mb0494c|M.bovis_AF2122/97 ETEFSLVRFDGDQQ----RADAVYAGMTPLVAADVAEVIGFVATRP---- Rv0484c|M.tuberculosis_H37Rv ETEFSLVRFDGDQQ----RADAVYAGMTPLVAADVAEVIGFVATRP---- MMAR_0810|M.marinum_M ETEFSLVRFDGDEQ----RADAVYSGMTPLVAADIAEVIGFVASRP---- MUL_4554|M.ulcerans_Agy99 ETEFSLVRFDGDEQ----RADAVYSGMTPLVAADIAEVIGFVASRP---- MAB_4060|M.abscessus_ATCC_1997 ETEFSVVRFDGDQD----RADAVYRGITPLVAEDVAEIIAFVASRP---- Mflv_0088|M.gilvum_PYR-GCK KTDFSLNRFDGDAE----RAEKVYEGVTPLVAEDIAEVVGFVASRP---- MLBr_01094|M.leprae_Br4923 KTAIARNATAAEGLDVSKIASRFDTWVAHTSPQHAARIILKAVRKKKARV TH_4266|M.thermoresistible__bu RTPGLEADAKRQGFDID-MIGQTNGSGRIAEPDEIGYGVLFFASDAS--- * . . : MAV_2980|M.avium_104 ---RRVAVNHMLVRAAEQTW----------------- MSMEG_5569|M.smegmatis_MC2_155 ---RHAAIGELWIMPTEQLV----------------- Mvan_3063|M.vanbaalenii_PYR-1 ---PEVEIGDLTIRPAVQG------------------ Mb0494c|M.bovis_AF2122/97 ---SHVNLDQIVIRPRDQAS--ASRRATHPVR----- Rv0484c|M.tuberculosis_H37Rv ---SHVNLDQIVIRPRDQAS--ASRRATHPVR----- MMAR_0810|M.marinum_M ---PHVNLDQIIIRPRDQAS--ATRRANHQV------ MUL_4554|M.ulcerans_Agy99 ---PHVNLDQIIIRPRDQAS--ATRRANHQV------ MAB_4060|M.abscessus_ATCC_1997 ---PHVNLDQIVVKPRDQAS--STRRATRQ------- Mflv_0088|M.gilvum_PYR-GCK ---SHVDLDLIVVRPRDQVSGASGSRFHRQS------ MLBr_01094|M.leprae_Br4923 LVGPDAKVANVVVRFSGGAGYQRLFAQVASRLILNQR TH_4266|M.thermoresistible__bu ---SYCSGQTLYMHGGPGPAGV--------------- : :