For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRLVPSALTCWAVTAGGIWWPIGRELAWCCVGLLAIAGALRWRAARRHRRPRLSSVSAGLAAIGVVGAGF GFAVALRADAVDHHPIAADFGASAPVTVTPSESPVSLGSGTQGRLMFRATLQQLRSDQMSGRVVVFARGP DFGGLMVGQPVRFTARIGRPTRRDLTVAVLTASGRPTLGSASAVQRAAHEVRRRFAAAVRDTLPADQAAL LPALVLGDTSAVPTPTGRDFRAAGMTHLMAVSGANVTIVCAAVLFSARLIGPRAAVLLAALALVAFVVVV QPTASVLRAAVMGAIALAGMLTSRRRQAIPALAATVLVLLAVAPQLSVDVGFALSVLATAALVVLAPAWS RRLADRGWPKPLADAVAVAWAAQLVTAPLVAAISGRFSVVAAAANLLVAAVIAPITVLGTAAAALCPIWP AGARLLIRFTGPELWWVGGVAHRAAGLPGATVPVPDGTAGTLIVGGVTLLAVVAWRWRRFRAAAAAALLI DLAWVLSGLT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1768 | - | - | 100% (500) | competence protein |
M. avium 104 | MAV_4427 | - | 3e-05 | 22.99% (435) | efflux ABC transporter, permease protein |
M. avium 104 | MAV_4124 | - | 5e-05 | 30.49% (246) | dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2437c | - | 0.0 | 71.70% (477) | hypothetical protein Mb2437c |
M. gilvum PYR-GCK | Mflv_2663 | - | 1e-146 | 59.75% (477) | ComEC/Rec2-related protein |
M. tuberculosis H37Rv | Rv2414c | - | 0.0 | 70.83% (504) | hypothetical protein Rv2414c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1627 | - | 1e-124 | 52.30% (501) | hypothetical protein MAB_1627 |
M. marinum M | MMAR_3735 | comEC | 1e-180 | 68.84% (507) | membrane metal-binding protein ComEC |
M. smegmatis MC2 155 | MSMEG_4573 | - | 1e-148 | 58.48% (501) | competence protein |
M. thermoresistible (build 8) | TH_1460 | - | 1e-141 | 62.21% (426) | competence protein |
M. ulcerans Agy99 | MUL_3679 | comEC | 1e-176 | 69.08% (498) | membrane metal-binding protein ComEC |
M. vanbaalenii PYR-1 | Mvan_3914 | - | 1e-150 | 61.17% (479) | ComEC/Rec2-related protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb2437c|M.bovis_AF2122/97 -MGFG---ASRLDVRLVPAALVSWIVTAAGIVWPIGNVCALCCVVVALGG Rv2414c|M.tuberculosis_H37Rv -MGFG---ASRLDVRLVPAALVSWIVTAAGIVWPIGNVCALCCVVVALGG MMAR_3735|M.marinum_M MAGAGRDVAERLDVRLVPGALTSWIVTAAGIVWPVGRACASGCLLLALGA MUL_3679|M.ulcerans_Agy99 MAGAGRDVAERLYVRLVPGALTSWIVTAAGIVWPVGRACASGCLLLALGA MAV_1768|M.avium_104 -------------MRLVPSALTCWAVTAGGIWWPIGRELAWCCVGLLAIA MSMEG_4573|M.smegmatis_MC2_155 ----MTDEPELLDLRLVPAALTAWLVTAAGIVWYIAGSVLVVIVVTLLAA TH_1460|M.thermoresistible__bu -------------------------------------------------- Mflv_2663|M.gilvum_PYR-GCK ---------MAVDLRLVPAALTSWLVTAAGILWLWAGALAVLAVAVGVTA Mvan_3914|M.vanbaalenii_PYR-1 -----------MDLRLVPAALTSWAVTAAGIVWLRAGAVAATLTAVAAAA MAB_1627|M.abscessus_ATCC_1997 -MTSAGADEPVLDLRLVPPALAAWAATATGILWPTG-----YFTAAALGI Mb2437c|M.bovis_AF2122/97 GALWWCVARRSWHAPRLGSISAGLVAVGMVGAGYGLAVALRSEAVDRHPI Rv2414c|M.tuberculosis_H37Rv GALWWCVARRSWHAPRLGSISAGLVAVGMVGAGYGLAVALRSEAVDRHPI MMAR_3735|M.marinum_M GVLWWITDRRPRSRRWPRAVSAGLVTVGVVGAGFGMAIALRTEALARHPI MUL_3679|M.ulcerans_Agy99 GVLWWITDRRPRSRRWPCAVSAGLVTVGVVGAGFGMAIALRTEALASHPI MAV_1768|M.avium_104 GALRWRAARRHR-RPRLSSVSAGLAAIGVVGAGFGFAVALRADAVDHHPI MSMEG_4573|M.smegmatis_MC2_155 AVTRWAGPA---------RTGAVVIAVAVTGVGFAVAIGLRVNQVREHPV TH_1460|M.thermoresistible__bu ---------------------------------MAVAITLRTDHLDRHPL Mflv_2663|M.gilvum_PYR-GCK AVGWWAARR-TAAEAPRRGRAAATVAVALIGAGFAVAVTARVDAAGDHPI Mvan_3914|M.vanbaalenii_PYR-1 LIGWWAARRRLRGGADRRALGSAVVAVAVVGSGFAVAVSLRVDAAAEHAI MAB_1627|M.abscessus_ATCC_1997 GAIWVRLSRRRWNG----AVAAAVASILIAGMGFSVAAAIRHHGVQNHPL ..* * . *.: Mb2437c|M.bovis_AF2122/97 TVAFGTSALVTVTPSESPVSLGR---GRLMFRATVQRLRD--DETSGRVV Rv2414c|M.tuberculosis_H37Rv TVAFGTSALVTVTPSESPVSLGR---GRLMFRATVQRLRD--DETSGRVV MMAR_3735|M.marinum_M SAAFGTSAAVTVTPSESALSLGS---DRLMFRATIQRLRD--DEISGRVV MUL_3679|M.ulcerans_Agy99 SAAFGTSAAVTVTPSESALSLGS---DRLMFRATIQRLRD--DEISGRVV MAV_1768|M.avium_104 AADFGASAPVTVTPSESPVSLGSGTQGRLMFRATLQQLRS--DQMSGRVV MSMEG_4573|M.smegmatis_MC2_155 VDRYGGAATVRVVVSEVPRPTRG---NRLMFRAALTELDG--APVSGRVM TH_1460|M.thermoresistible__bu TDRYGTVAGVVVTPTEIPRPLGG---GRLMFRGTLRSADG--QRMSGRVV Mflv_2663|M.gilvum_PYR-GCK TGRVGSVVEVTVTPADTPRVLAG---GRTMIRGTLVRLDG--APSSGDVV Mvan_3914|M.vanbaalenii_PYR-1 TGYFGSDTSVVVTPSETPRVLDG---GRTMIRGALVALAG--APSSGDVL MAB_1627|M.abscessus_ATCC_1997 RSRVGQIVTAQLRVTDDPRSVTG---GRAMMRADLVGLGDPVQGMTGAVL * . . : :: . .* *:*. : . :* *: Mb2437c|M.bovis_AF2122/97 VFARALDF---GELMVGQPVQFRARISRPARHDLTVAVFNATGRPTVGRA Rv2414c|M.tuberculosis_H37Rv VFARALDF---GELMVGQPVQFRARISRPARHDLTVAVFNATGRPTVGRA MMAR_3735|M.marinum_M VFARASEFEETGELMVGRPVRFTARISGPARHDLTVAVLNSAGAVKAGRA MUL_3679|M.ulcerans_Agy99 VFARAFEFEEMGELMVGRPVRFTARISGPARHDLTVAVLNSAGAVKAGRA MAV_1768|M.avium_104 VFARGPDF---GGLMVGQPVRFTARIGRPTRRDLTVAVLTASGRPTLGSA MSMEG_4573|M.smegmatis_MC2_155 VFASG-RFG---ALTPGSPVGFRATLSRPMRADLTVAALSARGDPTIGEA TH_1460|M.thermoresistible__bu VFASAARYG---ELIAGQPAGFTARIGRPARRDLTVATLSATGSPVPGDA Mflv_2663|M.gilvum_PYR-GCK VFAAAGDYA---RLSAGQSAAFRARVSRPTRRDLTVAVLSAQGRPVAGDA Mvan_3914|M.vanbaalenii_PYR-1 VFASGAGYA---NLTAGQPAAFRARVSRPKRRDLTVAVLSAHGEPVPGEA MAB_1627|M.abscessus_ATCC_1997 VFGSSSLLG---RVAVGDTVRARAAVARPGRRDLTVATLTVVAEPSIFGH **. . : * .. * :. * * *****.:. . Mb2437c|M.bovis_AF2122/97 GPVHRAAHIVRHRFAAAVREVLPADQATMLPALVLGDTSTVTALTSREFR Rv2414c|M.tuberculosis_H37Rv GPVHRAAHIVRHRFAAAVREVLPADQATMLPALVLGDTSTVTALTSREFR MMAR_3735|M.marinum_M GALQRAAHQVRGRFAAAARRVLPADQAAMLPALVLGDTSTVSTETGRAFR MUL_3679|M.ulcerans_Agy99 GALQRAAHQVCGRFAAAARRVLPADQAAMLPALVLGDTSTVSTETGRAFR MAV_1768|M.avium_104 SAVQRAAHEVRRRFAAAVRDTLPADQAALLPALVLGDTSAVPTPTGRDFR MSMEG_4573|M.smegmatis_MC2_155 PAVQRGAQRIRTSFAETARLVLPADQAAILPGLVLGDTSTVSTQTTAEFR TH_1460|M.thermoresistible__bu PALLRAAHRVRAGFAESARAVLPAEQAAMLPALVLGDTSAVSGRVTAEFR Mflv_2663|M.gilvum_PYR-GCK APIHRAAHGLRTEFADAARLALAADPAAMLPALVLGDTTAVPARIAGEFR Mvan_3914|M.vanbaalenii_PYR-1 APIHRAAHRLRARFAESARLALPPDQAATLPALVLGDTSALSAQTTAEFR MAB_1627|M.abscessus_ATCC_1997 SPIHGVANGIRDRFVDVSRNALPAGEAALLPGLVLGDTSALDAQTVAMFR .: *: : *. * .*.. *: **.******::: ** Mb2437c|M.bovis_AF2122/97 AAGLTHLTAVSGANVTIVCA-----AALVSARLIGPRAAVVCAAVALVAF Rv2414c|M.tuberculosis_H37Rv AAGLTHLTAVSGANVTIVCA-----AALVSARLIGPRAAVVCAAVALVAF MMAR_3735|M.marinum_M SAGMTHLTAVSGANVTIVCG-----AVLFSARWVGPRAAVALAGIALVAF MUL_3679|M.ulcerans_Agy99 SAGMTHLTAVSGANVTIVCGAVRCGAVLFSARWVGPRAAVALAGIALVAF MAV_1768|M.avium_104 AAGMTHLMAVSGANVTIVCA-----AVLFSARLIGPRAAVLLAALALVAF MSMEG_4573|M.smegmatis_MC2_155 SSGLTHLTAVSGANVTIVCG-----ALLLSAAVVGPRIAVGLALVGLIAF TH_1460|M.thermoresistible__bu AAGLTHLTAVSGANVTIVCG-----AVLLSAAVVGPRCAVAAAAVALVAF Mflv_2663|M.gilvum_PYR-GCK ASGLAHLTAVSGANVTIVCG-----AVLLSAVLIGPRAAVGLAAITLLAF Mvan_3914|M.vanbaalenii_PYR-1 RSGLAHLTAVSGANVTIVCG-----AVLLSAVLIGPRAAVALAALTLVGF MAB_1627|M.abscessus_ATCC_1997 TSGLTHLMAVSGANVSIVCG-----AVLLLGRLIGLRTSVVLAGLVLVGF :*::** *******:***. * *. . :* * :* * : *:.* Mb2437c|M.bovis_AF2122/97 VILVQPTASVLRAAVMGAIALVGMLSARRRQAIPALSGSVLVLLAAAPHL Rv2414c|M.tuberculosis_H37Rv VILVQPTASVLRAAVMGAIALVGMLSARRRQAIPALSGSVLVLLAAAPHL MMAR_3735|M.marinum_M VIVVQPTASVLRAALMASIALAAMLSSRRRQAIPALSTTVLVLLVAAPHL MUL_3679|M.ulcerans_Agy99 VVVVQPTASVLRAALMASIALAAMLSSRRRQAIPALSTTVLVLLVAAPHL MAV_1768|M.avium_104 VVVVQPTASVLRAAVMGAIALAGMLTSRRRQAIPALAATVLVLLAVAPQL MSMEG_4573|M.smegmatis_MC2_155 VIVVQPSASVLRSAVMGAVTLLAIVTHRRRQAIPALAASVLVLMAAAPEL TH_1460|M.thermoresistible__bu VIVVLPSASVLRAAVMAAITLLAMVSHRRRQAIPALAASVLGLVVAAPEL Mflv_2663|M.gilvum_PYR-GCK VVVVQPSPSVLRAAVMGAITLLAVLSHRRRQALPALSATVIALMVGAPEL Mvan_3914|M.vanbaalenii_PYR-1 VVVVQPSPSVLRAAVMGAITLLAVLSHRRRQALPALAATVIALMIGVPEL MAB_1627|M.abscessus_ATCC_1997 VILVRPSPSVLRAAVMGAIGLLGVLTARRRQAIPALAATILVLLAVSPGL *::* *:.****:*:*.:: * .::: *****:***: ::: *: * * Mb2437c|M.bovis_AF2122/97 AVDIGFALSVAATGALVVIAPVWSRRLVDRGCPKVLADALAVAAAAQLVT Rv2414c|M.tuberculosis_H37Rv AVDIGFALSVAATGALVVIAPVWSRRLVDRGCPKVLADALAVAAAAQLVT MMAR_3735|M.marinum_M AVDMGFALSVVATAALVVVAPGWSDGLVARGWPKVLADGLAVATAAQVVT MUL_3679|M.ulcerans_Agy99 AVDMGFALSVVATAALVVVAPGWSDGLVVRGWPKVLADGLAVATAAQVVT MAV_1768|M.avium_104 SVDVGFALSVLATAALVVLAPAWSRRLADRGWPKPLADAVAVAWAAQLVT MSMEG_4573|M.smegmatis_MC2_155 AVDVGFALSVCATAAIVVIAPVWARRLEARGWPSTLAAAVSVAAAAQLVT TH_1460|M.thermoresistible__bu AVDAGFALSVAATAALIVIAPAWSRRLTARGWPKPLADAVSIATAAQVVT Mflv_2663|M.gilvum_PYR-GCK AVDVGFALSVSATAALVVIAPAWSRRLTERGWPKPPADAVSVALAAQLVT Mvan_3914|M.vanbaalenii_PYR-1 AVDVGFALSVAATAALVVLAPAWSRRLTGRGWPKPVADAVSVAVAAQLVT MAB_1627|M.abscessus_ATCC_1997 AVDIGFALSVVATAALVVLAPRWSMRLTARGWPKPLADALCVAVAAQLVT :** ****** **.*::*:** *: * ** *. * .:.:* ***:** Mb2437c|M.bovis_AF2122/97 APLVAAISGRVSLVAVVANLAVAAVIAPITVLGSVAAVLVVPWPAGAQVL Rv2414c|M.tuberculosis_H37Rv APLVAAISGRVSLVAVVANLAVAAVIAPITVLGSVAAVLVVPWPAGAQVL MMAR_3735|M.marinum_M APLVAAISGRFSVVAVVANLAVAAVIAPITVLGSAAAVLVIPWPAGAQLL MUL_3679|M.ulcerans_Agy99 APLVAAISGRFSVVAVVANLAVAAVIAPITVLGSAAAVLVIPWPAGAQLL MAV_1768|M.avium_104 APLVAAISGRFSVVAAAANLLVAAVIAPITVLGTAAAALCPIWPAGARLL MSMEG_4573|M.smegmatis_MC2_155 APLVAGISGRFSVVAVAANLAVVGVIPPITVLGTAAAALAAVWPAGAGLL TH_1460|M.thermoresistible__bu APLIAGISGRLSLVSIAANLAVAVVIPPITVLGTVAAALGACWPDGAQLL Mflv_2663|M.gilvum_PYR-GCK APLVAGISGSVSLVGVLANLAVAPVIPPITVFGTAAAALCALWPSGAELL Mvan_3914|M.vanbaalenii_PYR-1 APLVAGISGSVSVVAVLANLVVAPVIPPITVIGCAAAALCPLWPAGAELL MAB_1627|M.abscessus_ATCC_1997 APVIAAISGSVSMASIAANVLAGLVIVPITVLGTAAAALTVVSPQVAGLL **::*.*** .*:.. **: . ** ****:* .**.* * * :* Mb2437c|M.bovis_AF2122/97 IRFTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVGGATVFTVAQWR Rv2414c|M.tuberculosis_H37Rv IRFTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVGGATVFTVAQWR MMAR_3735|M.marinum_M IRFTGPQVWWVLHVARWAADVPGATVAVPAGLAGVLIVGGVTVLVVALWR MUL_3679|M.ulcerans_Agy99 IRFTGPQVWWVLHVARWAADVPGATVAVPAGLAGVLIVGGVTVLVVALWR MAV_1768|M.avium_104 IRFTGPELWWVGGVAHRAAGLPGATVPVPDGTAGTLIVGGVTLLAVVAWR MSMEG_4573|M.smegmatis_MC2_155 IRFTGPEVWWLLSVARWASGMPAATVPTPSGWAGVLLVAISGVTLTVLWR TH_1460|M.thermoresistible__bu IRFAGPEVWWLLEVARWSAAVPGSAVPVPSGVAGVTVVAGGAVAAVLLWR Mflv_2663|M.gilvum_PYR-GCK IRFTGPEVWWLLTVARWAARMPAATVPVPSGIAGVLTVAVLAVAVAAVWH Mvan_3914|M.vanbaalenii_PYR-1 IRFTGPEVWWLLGVARWAAGLPIAAVPVPSGAAGVLTVAIAAVAVAATWH MAB_1627|M.abscessus_ATCC_1997 ARFCGPELWWLLRVADYASAGGTTAIPVPAGVLGFAVVAVLLGIAVWLWR ** **::**: ** :: :::... * * *. . *: Mb2437c|M.bovis_AF2122/97 LALVSRGHVQNDGGGRHMSACLVAVRAGRPFVTPSWGERG Rv2414c|M.tuberculosis_H37Rv WRWFRAAMCKT---MAVAVICLLAWSLSG-LVGPS----- MMAR_3735|M.marinum_M FRWIRLAMISA----LLATLGSGLAWSVAGLVGPS----- MUL_3679|M.ulcerans_Agy99 FRWIRLAMISA----LLATQGS-------GVVD------- MAV_1768|M.avium_104 WRRFRAAAAAA----LLIDLAWVLSGLT------------ MSMEG_4573|M.smegmatis_MC2_155 SRWVRRAVAGA----AVVMLAWTVAGQVVGAVGPT----- TH_1460|M.thermoresistible__bu RPWIRWATAGT----VLSLVAWTVAGP--GPSG------- Mflv_2663|M.gilvum_PYR-GCK -----RVVSGR----RETIMR------------------- Mvan_3914|M.vanbaalenii_PYR-1 -----WVVSHR----RDTIVR------------------- MAB_1627|M.abscessus_ATCC_1997 RRWFRGLVWTG----VLCALALMISARVVS----------