For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DFSFTEEQETIGKLARDLFERRATPERLTELEAGDTRHDAALWEELAAADLLGAALPEAVGGSCASGGGF VELGVLLAEVGYGVAPVPAYATLVLGADSIARHGSSEQQQRVLPGVIAGSRILTAGLAEPGRSDPARPAT TARRDGPNWRLDGAKELVPAAQLADTMLIPAALDGGDVGLFLLAADAAGVEIRPVPTTNREPHADVFLDG ARVSEADRIAGMGLVESLLTRALVALCAIQLGVVERALRIAAEYTTGREQFGRPIGSFQAVQQRMADAFI DVEAIRWTTWQAAWLVAHGRPADRAARIAKFWAAEAGARVAATAQHVHGGIGIDVTYPLHRYFLWAKHNE LTLGPASAQLAHLGATYSEGHA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1336 | - | - | 100% (373) | acyl-CoA dehydrogenase domain-containing protein |
| M. avium 104 | MAV_0651 | - | 5e-68 | 40.54% (370) | putative acyl-CoA dehydrogenase |
| M. avium 104 | MAV_1765 | - | 7e-44 | 33.51% (367) | pimeloyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3535 | fadE27 | 2e-70 | 41.80% (378) | acyl-CoA dehydrogenase FADE27 |
| M. gilvum PYR-GCK | Mflv_1550 | - | 5e-74 | 43.90% (369) | acyl-CoA dehydrogenase domain-containing protein |
| M. tuberculosis H37Rv | Rv3505 | fadE27 | 5e-70 | 41.53% (378) | acyl-CoA dehydrogenase FADE27 |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 1e-22 | 28.88% (374) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_4159 | - | 1e-75 | 43.01% (365) | acyl-CoA dehydrogenase |
| M. marinum M | MMAR_4993 | fadE27 | 2e-69 | 41.62% (370) | acyl-CoA dehydrogenase FadE27 |
| M. smegmatis MC2 155 | MSMEG_5907 | - | 2e-71 | 43.56% (365) | acyl-CoA dehydrogenase |
| M. thermoresistible (build 8) | TH_3944 | - | 1e-139 | 69.17% (373) | PUTATIVE acyl-CoA dehydrogenase, C- domain protein |
| M. ulcerans Agy99 | MUL_4068 | fadE27 | 7e-68 | 41.08% (370) | acyl-CoA dehydrogenase FadE27 |
| M. vanbaalenii PYR-1 | Mvan_5207 | - | 1e-64 | 39.73% (370) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_1336|M.avium_104 ----------MDFSFTEEQETIGKLARDLFERRATPERLTELEAG----D
TH_3944|M.thermoresistible__bu ----------MDFSFSEDQETIGKIARQLFEHRATPEHLLDLESG----D
Mb3535|M.bovis_AF2122/97 ----------MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKL----E
Rv3505|M.tuberculosis_H37Rv ----------MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKL----E
MMAR_4993|M.marinum_M ----------MDFSTTEAAQDLGGLVDTIVDAVCTPEHQRQLDRL----E
MUL_4068|M.ulcerans_Agy99 ----------MDFSTTEAAQDLGGLVATIVDAVCTPEHQRQLDGL----E
Mflv_1550|M.gilvum_PYR-GCK ----------MDFTTTEASEDLGGLVRTITESVCTPEHQRELDGLGPDAG
Mvan_5207|M.vanbaalenii_PYR-1 ----------MDFKTTEASEDLGGLVRTITESVCTPEHQRELDGLRPEAG
MSMEG_5907|M.smegmatis_MC2_155 ----------MDFTTTEAAADLGGLVRTITESVCTPEHQRELDGLP----
MAB_4159|M.abscessus_ATCC_1997 ----------MDFSLTEAQTDLAGLTRTIASTISTPERQKELDKQ----D
MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAP-HAADVDQR-----
*. .* : : . :* : :::
MAV_1336|M.avium_104 TRHDAALWEELAAADLLGAALPEAVGGSCASGGGFVELGVLLAEVGYGVA
TH_3944|M.thermoresistible__bu IRHDPALWQELASADLLGVALPESVGG---TGGGFLELGVLLAEVGRCVA
Mb3535|M.bovis_AF2122/97 QRFDRELWRKLIDAGILSSAAPESLGG---DGFGVLEQVAVLVALGHQLA
Rv3505|M.tuberculosis_H37Rv QRFDRELWRKLIDAGILSSAAPESLGG---DGFGVLEQVAVLVALGHQLA
MMAR_4993|M.marinum_M QRFDRELWRKLIDSDILSSAAATQVGG---DGFGVLEQVAILVALGHQLA
MUL_4068|M.ulcerans_Agy99 QRFDRELWRKLIDSDILSSAAATQVGG---DGFGVLEQVAILVALGHQLA
Mflv_1550|M.gilvum_PYR-GCK GRFDKTLWSKLIDADVLSTTAPESLGG---GGFGVLEEVAVLVALGRQLA
Mvan_5207|M.vanbaalenii_PYR-1 GRFDRDLWGKLIDADILSTTSPESLGG---GGFGVLEEVAVLVALGRQLA
MSMEG_5907|M.smegmatis_MC2_155 ERFDRDLWAKLVEADILSAAAPESVGG---GGFGVLEQTSVLTALGRQLA
MAB_4159|M.abscessus_ATCC_1997 SRFDRQLWTKLAEADILSTAAPESVGG---AGFGVLEQSSILVELGRELA
MLBr_00737|M.leprae_Br4923 ARFPEEALAALNASGFNAIHVPEEYGG---QGADSVAACIVIEEVARVDA
*. * :.. . . ** * . : :: :. *
MAV_1336|M.avium_104 PVPAYATL-VLGADSIARHGSSEQQQRVLPGVIAGSRILTAGLAE-PGRS
TH_3944|M.thermoresistible__bu PVPVYATL-LLGADTIARHGDPAVQQHYLPGVVDGSRILSAAIAE-PGSI
Mb3535|M.bovis_AF2122/97 AVPYLESV-VLAAGALARFGSPELQQGWGVSAVSGDRILTVALDG-EMGE
Rv3505|M.tuberculosis_H37Rv AVPYLESV-VLAAGALARFGSPELQQGWGVSAVSGDRILTVALDG-EMGE
MMAR_4993|M.marinum_M AVPYLESV-VLAAGALARFGSEELQQSWGAAAVGGEKILAVALDA-EMGE
MUL_4068|M.ulcerans_Agy99 AVPYLESV-VLAAGALARFGSEELQQSWGAAAVGGEKILAVALDA-EMGE
Mflv_1550|M.gilvum_PYR-GCK AVPYLESV-VLGAGALARFGDDGLQQQWAAPAVTGDKVLTVALDG-EMGE
Mvan_5207|M.vanbaalenii_PYR-1 AVPYLESV-MLAAGALATFGSASLQQDWAAQAIKGEKVLAVAFDG-EMGE
MSMEG_5907|M.smegmatis_MC2_155 AVPYLESV-VAAAGAIAEFGSDAQRAEWGAPAVAGSKILTVALDG-EMGQ
MAB_4159|M.abscessus_ATCC_1997 AVPYLESV-VLAAGALAAFGSEAMRNDWAAPAVAGKKVLTIALEG-EPGE
MLBr_00737|M.leprae_Br4923 SASLIPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGS
... :: .: : *. : : : .:
MAV_1336|M.avium_104 DPARPATTARRDGPNWRLDGAKELVPAAQLADTMLIPAALD--GGDVG--
TH_3944|M.thermoresistible__bu DPLTPSTTARRDGDSWLLDGTKTLVPAAQLAEAIVVTATPQ--DDDGGPA
Mb3535|M.bovis_AF2122/97 GPVQ----AAGTGHGYRLTGTRTQVGYGPVADAFLVPAET-----DSGAA
Rv3505|M.tuberculosis_H37Rv GPVQ----AAGTGHGYRLTGTRTQVGYGPVADAFLVPAET-----DSGAA
MMAR_4993|M.marinum_M GPVQ----AARSGAGFRLTGTRTQVGYGPVADAFLVPAET-----DSGTV
MUL_4068|M.ulcerans_Agy99 GPVQ----AARSGAGFRLTGTRTQVGYGPVADAFLVPAET-----DSGTV
Mflv_1550|M.gilvum_PYR-GCK GPVR----ATTTADGVTLTGTRTQVPFAVGADAFLVPAET-----DSGVA
Mvan_5207|M.vanbaalenii_PYR-1 GPVL----AQGSGDGYTLTGSRTQVAFGVNADAFLVPAET-----DSGTA
MSMEG_5907|M.smegmatis_MC2_155 GPVQ----AQADGDDHRLTGSRTLVSYGPVADAYLVPAET-----GSGVS
MAB_4159|M.abscessus_ATCC_1997 GPVA----ARTEGTGYVLTGNRVLVPFGVEADAYLVPAET-----ETGTA
MLBr_00737|M.leprae_Br4923 DAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGIS
.. * . . * * : : . : : * *
MAV_1336|M.avium_104 LFLLAADAAGVEIRPVPTTN---REPHADVFLDGARVSEADRIAGMGL--
TH_3944|M.thermoresistible__bu LFVVDTADPGVRTEPVQTTN---GEPFADVELRGARAAHR-LTAGENP--
Mb3535|M.bovis_AF2122/97 VFLVAAGDPGVAVTALATTG---LGSVGHLELNGAKVDAARRVGGTDV--
Rv3505|M.tuberculosis_H37Rv VFLVAAGDPGVAVTALATTG---LGSVGHLELNGAKVDAARRVGGTDV--
MMAR_4993|M.marinum_M VFLVAADDPGVSVTALQTTG---LGSVGHLALDGTEVDAARGIGGSDV--
MUL_4068|M.ulcerans_Agy99 VFLVAADDPGVSVTALQTTG---LGSVGHLALDGTEVDAARGIGGSDV--
Mflv_1550|M.gilvum_PYR-GCK VFLVAAADAGVTVTPLDTTG---HGSVAALDLQGVGITGDRRVGGSEV--
Mvan_5207|M.vanbaalenii_PYR-1 VFLVGSADDGVAVTALDTTG---HGSVAGLQLQGVAIGSDRRVGGPEV--
MSMEG_5907|M.smegmatis_MC2_155 VFIVAADDAGVTETSLNTTG---KGSVAHLDLQDVAVGADRVLGGTQV--
MAB_4159|M.abscessus_ATCC_1997 VFLVSADDAGVTQQALHTTG---KDSSAELILSEVPVPAERKVGGAEV--
MLBr_00737|M.leprae_Br4923 AFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIGEPGTGF
*:: *. . .. . : : .
MAV_1336|M.avium_104 --VESLLTRALVALCAIQLGVVERALRIAAEYTTGREQFGRPIGSFQAVQ
TH_3944|M.thermoresistible__bu --VESLHTRALIGLCAMQVGVTERALRIAASYTSEREQFGRPIGSFQAVQ
Mb3535|M.bovis_AF2122/97 --VVWLGTLSTLSRTAFQLGVLERGLQMTAEYARTREQFDRPIGSFQAVG
Rv3505|M.tuberculosis_H37Rv --AVWLGTLSTLSRTAFQLGVLERGLQMTAEYARTREQFDRPIGSFQAVG
MMAR_4993|M.marinum_M --TAWLRTINTLGRSAFQLGVLERGLRMTAEYARTREQFDRPIGSFQAVG
MUL_4068|M.ulcerans_Agy99 --TAWLRTINTLGRSAFQLGVLERGLQMTAEYARTREQFDRPIGSFQAVG
Mflv_1550|M.gilvum_PYR-GCK --LDWLVTRNALARSAYQLGVVERALELTAQYAREREQFDRPIGSFQAVS
Mvan_5207|M.vanbaalenii_PYR-1 --LDWLVTRHALGRSAYQLGVLERALELTASYAREREQFDRPIGSFQAVS
MSMEG_5907|M.smegmatis_MC2_155 --AEWLTTRVTLGRTAYQLGVLERALELTASYAREREQFDRPIGSFQAVS
MAB_4159|M.abscessus_ATCC_1997 --VEWLRLRESLGHSAYQLGVLERALELTADYARTREQFGKPIGGFQAVA
MLBr_00737|M.leprae_Br4923 KTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQ
* :*: : .* : *: *:**...*. **::
MAV_1336|M.avium_104 QRMADAFIDVEAIRWTTWQAAWLVAHG--------RPADRAARIAKFWAA
TH_3944|M.thermoresistible__bu QRMADAFIDTEAIRWTTWHAAWLVSKD--------RSAHREAAMAKFWAA
Mb3535|M.bovis_AF2122/97 QRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECPQPADIDVATAGFWAA
Rv3505|M.tuberculosis_H37Rv QRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECPQPADIDVATAGFWAA
MMAR_4993|M.marinum_M QRLADGYIDVKGLRLTLTQAAWRVSED--------LPAEIDVASAGFWAA
MUL_4068|M.ulcerans_Agy99 QRLADGYIDVKGLRLTLTQAAWRVSED--------LPAEIDVASAGFCAA
Mflv_1550|M.gilvum_PYR-GCK SRLADGYIDIKGLRLTVTQAAWRVSED--------LPADVDVASAAFWAA
Mvan_5207|M.vanbaalenii_PYR-1 SRLADGYIDIKGLRLTLTQAAWRLSED--------LPADLDVASAAFWAA
MSMEG_5907|M.smegmatis_MC2_155 SRLADGYIDVKGLRLTLTQAAWRLSED--------LPADVDVASAAFWAA
MAB_4159|M.abscessus_ATCC_1997 QRLADGYIDVKGLCLTLWQAAWRVSED--------LPSDVDVATAKFWAA
MLBr_00737|M.leprae_Br4923 FMLADMAMKVEAARLIVYAAAARAERGE-------PDLGFISAASKCFAS
:** :. :. ** .. : *:
MAV_1336|M.avium_104 EAGARVAATAQHVHGGIGIDVTYPLHRYFLWAKHNELTLGPASAQLAHLG
TH_3944|M.thermoresistible__bu EAGARVTATAQQVHGGIGIDITYPLSRYFLWAKQIELTLGSASHQLARLG
Mb3535|M.bovis_AF2122/97 EAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQLRRIG
Rv3505|M.tuberculosis_H37Rv EAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQLRRIG
MMAR_4993|M.marinum_M EAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKEAEFALGGATTALRQIG
MUL_4068|M.ulcerans_Agy99 EAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKEAEFALGGATTALRQIG
Mflv_1550|M.gilvum_PYR-GCK EAGHRVAHTAVHVHGGVGIDIDHPVHRYFLAAKQTEFAVGGATGQLLRIG
Mvan_5207|M.vanbaalenii_PYR-1 EAGHRVAHTTVHVHGGVGIDIDHPVHRYFLAAKQTEFAVGGATGQLLRIG
MSMEG_5907|M.smegmatis_MC2_155 EAGHRVAHTAVHVHGGVGIDMDHPVHRYFLAAKQSEFALGSATGQLLRIG
MAB_4159|M.abscessus_ATCC_1997 DAGHRVAHTAVHVHGGVGIDEDHPVHRYFLAAKRGEFASGSATEQLRRIG
MLBr_00737|M.leprae_Br4923 DIAMEVTTDAVQLFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMS
: . .*: ::.** * .*: *:: ** :: * :.
MAV_1336|M.avium_104 ATY-----SEGHA
TH_3944|M.thermoresistible__bu STYRAGGNREGHQ
Mb3535|M.bovis_AF2122/97 REL-----AETPA
Rv3505|M.tuberculosis_H37Rv REL-----AETPA
MMAR_4993|M.marinum_M REL-----AETPA
MUL_4068|M.ulcerans_Agy99 REL-----AETPA
Mflv_1550|M.gilvum_PYR-GCK REL-----ADTPA
Mvan_5207|M.vanbaalenii_PYR-1 REL-----ADTPA
MSMEG_5907|M.smegmatis_MC2_155 REL-----ADTPV
MAB_4159|M.abscessus_ATCC_1997 REL-----ADTPA
MLBr_00737|M.leprae_Br4923 RALLR--------