For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MCRLFGLHAGTRACTATFWLLDAPDSLAEQSRRNPDGTGLAVFDEHARPQLHKEPIAAWRDAAFAREAHQ LTGTTVIAHVRYATTGSLDVRNTHPFLQDGRIFAHNGVLEGLDVIDARLREVGVDGLVLGDTDSERVFAL ITAAIRARDGDITAGLVDAVRWLAEQVPIYAVNLLLSTATEMWALRYPHTHQLYVLDRSADAARQPEFDL HTIRIHARSQQLRTRPSVVFATERMDADPRWRLLEPGELVHVDAGLRVTRRLVLPDPPRQLLRRDELSTP VRDSQHALPDTRRAG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1188 | - | - | 100% (295) | glutamine amidotransferase, class-II |
M. avium 104 | MAV_4377 | glmS | 6e-07 | 27.81% (169) | D-fructose-6-phosphate amidotransferase |
M. avium 104 | MAV_0401 | - | 1e-06 | 25.76% (264) | hypothetical protein MAV_0401 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1090 | - | 1e-125 | 75.52% (286) | hypothetical protein Mb1090 |
M. gilvum PYR-GCK | Mflv_2003 | - | 1e-100 | 61.46% (288) | glutamine amidotransferase, class-II |
M. tuberculosis H37Rv | Rv1061 | - | 1e-125 | 75.52% (286) | hypothetical protein Rv1061 |
M. leprae Br4923 | MLBr_00371 | glmS | 2e-06 | 25.58% (172) | glucosamine--fructose-6-phosphate aminotransferase |
M. abscessus ATCC 19977 | MAB_3743c | - | 6e-10 | 31.72% (145) | glucosamine--fructose-6-phosphate aminotransferase |
M. marinum M | MMAR_4405 | - | 1e-115 | 70.73% (287) | hypothetical protein MMAR_4405 |
M. smegmatis MC2 155 | MSMEG_6248 | - | 8e-07 | 27.49% (251) | hypothetical protein MSMEG_6248 |
M. thermoresistible (build 8) | TH_0065 | - | 9e-09 | 27.27% (264) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0220 | - | 1e-113 | 69.90% (289) | hypothetical protein MUL_0220 |
M. vanbaalenii PYR-1 | Mvan_2921 | - | 7e-11 | 31.37% (204) | glutamine amidotransferase, class-II |
CLUSTAL 2.0.9 multiple sequence alignment Mb1090|M.bovis_AF2122/97 MCRLFGLHSGTDAVTATFWLLNASDSLAEQSRR---------NPDGTGLG Rv1061|M.tuberculosis_H37Rv MCRLFGLHSGTDAVTATFWLLNASDSLAEQSRR---------NPDGTGLG MAV_1188|M.avium_104 MCRLFGLHAGTRACTATFWLLDAPDSLAEQSRR---------NPDGTGLA MMAR_4405|M.marinum_M MCRLFGLHAGRDCVTATFWLLNAPDSLAAQSKR---------NPDGTGLG MUL_0220|M.ulcerans_Agy99 MCRLFGLHAGRDCVTATFWLLNAPDSLAAQSKR---------NPDGTGLG Mflv_2003|M.gilvum_PYR-GCK MCRLFGLHAG-RPVAATFWLLDAPNSLAQQSRR---------NPDGTGLG MSMEG_6248|M.smegmatis_MC2_155 MCRHVAWLGAPRSLAD--LVLDPPQGLLVQSYAPRRQKHGLMNADGWGAG TH_0065|M.thermoresistible__bu MCRHLGWLGRPRSIAE--LMLEPPYGLLVQSYAPRRQKYGLLNADGWGVG MLBr_00371|M.leprae_Br4923 MCGLVGYVGQRPACGVVMDALRRMEYRGYDSSG----------IALINGS MAB_3743c|M.abscessus_ATCC_199 MCGIVGYVGHRDALSVVLEALRRLEYRGYDSAG----------VALADG- Mvan_2921|M.vanbaalenii_PYR-1 MCRLLGVASTLPVSVADAVGETVLTDFLALTKIHG--------DGWGVAS ** .. . : Mb1090|M.bovis_AF2122/97 VFDEHHQPRLHKQPIAAWQDADFATEAHELTGTTFVAHVRYATTGS-LDI Rv1061|M.tuberculosis_H37Rv VFDEHHQPRLHKQPIAAWQDADFATEAHELTGTTFVAHVRYATTGS-LDI MAV_1188|M.avium_104 VFDEHARPQLHKEPIAAWRDAAFAREAHQLTGTTVIAHVRYATTGS-LDV MMAR_4405|M.marinum_M VFDDRGRPELHKQPIAAWQDADFAAEAHEMTGTTFIAHVRYATAGS-HSV MUL_0220|M.ulcerans_Agy99 VFDDRGRPELHKQPIAAWQDADFAAEAHEMTGTTFIAHVRYATAGS-HSV Mflv_2003|M.gilvum_PYR-GCK VFGADGKPTVLKQPIPAWRDTSFATEARQMTGTTFVAHVRYATTGA-TEE MSMEG_6248|M.smegmatis_MC2_155 FFDDEGVARRWRSDKPLWGDASFASVAPALRSRCVLAAVRSATIGMPIEP TH_0065|M.thermoresistible__bu FFDDDGVARRWRSATPLWGDASFASIAPVLRSGCVVAAVRSATVGMPIEP MLBr_00371|M.leprae_Br4923 AKSGNLTVRRRAGRLSNLESVLAEMVPASLAGNVGLGHIRWATHGR-PTD MAB_3743c|M.abscessus_ATCC_199 --HGGLLVQRKAGRLANLESAIAESG-ESFAATTGMGHTRWATHGA-PTD Mvan_2921|M.vanbaalenii_PYR-1 AVGADDTPRVDVSADSALDDTRFGTAVKEPARG-SVVHLRWATNGLAVQP . .. : * ** * Mb1090|M.bovis_AF2122/97 RNTHPFLQDG--RIFAHNGVVEGLDVLDERLREVGADDLVLGQTDSERVF Rv1061|M.tuberculosis_H37Rv RNTHPFLQDG--RIFAHNGVVEGLDVLDERLREVGADDLVLGQTDSERVF MAV_1188|M.avium_104 RNTHPFLQDG--RIFAHNGVLEGLDVIDARLREVGVDGLVLGDTDSERVF MMAR_4405|M.marinum_M VNTHPFLQDG--RIFAHNGTLGDLELLDTRLREVGTAGLVQGQTDSERVF MUL_0220|M.ulcerans_Agy99 VNTHPFLQDG--RIFAHNGTLGDLELLDTRLREVGTAGLVQGQTDSERVF Mflv_2003|M.gilvum_PYR-GCK ENTHPFLQDD--RIFAHNGVVEGLDILDARLSELGVTDLVHGDTDSERVF MSMEG_6248|M.smegmatis_MC2_155 SASAPFSDGQ--WLLSHNGLVD-----------RGVLPLTGA-AESTVDS TH_0065|M.thermoresistible__bu SASAPFTDGH--WLLSHNGRVD-----------RAVLDTAAARAESTVDS MLBr_00371|M.leprae_Br4923 RNAHPHRDATGKIAVVHNGIIENFPSLRHELEIAGVEFVSDTDTEVAVHL MAB_3743c|M.abscessus_ATCC_199 RNAHPHQDATGKVAVVHNGIIENFAVLRAELESAGVEFASDTDSEVAVHL Mvan_2921|M.vanbaalenii_PYR-1 ENSHPFAADG--VAMAHNGSIKPMAALDALLEPRVVS-TLRGTTDSERYF : *. . *** : . :: Mb1090|M.bovis_AF2122/97 ALITASIRARDGNESAGLIDALRWLA------------------------ Rv1061|M.tuberculosis_H37Rv ALITASIRARDGNESAGLIDALRWLA------------------------ MAV_1188|M.avium_104 ALITAAIRARDGDITAGLVDAVRWLA------------------------ MMAR_4405|M.marinum_M ALITAAIRTHDGDVSAGLLDAMGWLA------------------------ MUL_0220|M.ulcerans_Agy99 ALITAAIRTHDGGVSAGLLDAMGWLA------------------------ Mflv_2003|M.gilvum_PYR-GCK AVITASIRRRDGDVDAGLADALHWLS------------------------ MSMEG_6248|M.smegmatis_MC2_155 AIVAALIFSRG---LDALGATIAEVG------------------------ TH_0065|M.thermoresistible__bu ALLAATIFERG---LDRLGETLRDVA------------------------ MLBr_00371|M.leprae_Br4923 VAQAYCAGETAGDFVGSVLAVLRRLQGHFTLVFANADEPGTIVAARRSTP MAB_3743c|M.abscessus_ATCC_199 VSRQFESGDTAGDFVASVQSVVRRLEGHFTLVFSHADDPGTIVAARRSTP Mvan_2921|M.vanbaalenii_PYR-1 ALIRQH-RRSAPDLVESVRRAVAELR------------------------ . : .: : Mb1090|M.bovis_AF2122/97 -------------------------------------------------- Rv1061|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1188|M.avium_104 -------------------------------------------------- MMAR_4405|M.marinum_M -------------------------------------------------- MUL_0220|M.ulcerans_Agy99 -------------------------------------------------- Mflv_2003|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_6248|M.smegmatis_MC2_155 -------------------------------------------------- TH_0065|M.thermoresistible__bu -------------------------------------------------- MLBr_00371|M.leprae_Br4923 LVLGIGDGEMFVGSDVAAFIEHTRQAVELGQDQAVVITADGYRISDFDGN MAB_3743c|M.abscessus_ATCC_199 LVVGIGDGEMFLGSDVAAFIEYTRDAVELGQDQVVVITADGYRITDFEGN Mvan_2921|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1090|M.bovis_AF2122/97 -------------------------------ANVPIYAVNVLLSTAT--- Rv1061|M.tuberculosis_H37Rv -------------------------------ANVPIYAVNVLLSTAT--- MAV_1188|M.avium_104 -------------------------------EQVPIYAVNLLLSTAT--- MMAR_4405|M.marinum_M -------------------------------ANVPIYAVNVLLSTAT--- MUL_0220|M.ulcerans_Agy99 -------------------------------ANVPIYAVNVLLSTATGI- Mflv_2003|M.gilvum_PYR-GCK -------------------------------THVPIYALNILLATAT--- MSMEG_6248|M.smegmatis_MC2_155 -------------------------------ELDPNARLNILAANGS--- TH_0065|M.thermoresistible__bu -------------------------------AADPDARLNILAGNGT--- MLBr_00371|M.leprae_Br4923 DDAVNARTFHIDWDLAAAEKGGYEYFMLKEIAEQPDAVVDTLLGHFTGGR MAB_3743c|M.abscessus_ATCC_199 DDTGNARVFTIDWDLSAAEKGGYEYFMLKEIAEQPAAVSDTLLGHFDLDR Mvan_2921|M.vanbaalenii_PYR-1 -------------------------------QMYPEASLNALILGEG--- * : * Mb1090|M.bovis_AF2122/97 ------------------DVWALRYPESHELYILDRR-GDGA--PEFHLR Rv1061|M.tuberculosis_H37Rv ------------------DVWALRYPESHELYILDRR-GDGA--PEFHLR MAV_1188|M.avium_104 ------------------EMWALRYPHTHQLYVLDRS-ADAARQPEFDLH MMAR_4405|M.marinum_M ------------------GMWALRYPESHNLYILDRRNGAPAPRREFHLR MUL_0220|M.ulcerans_Agy99 ------------------GMWALRYPESHNLYILDRRNGAPASRREFHLR Mflv_2003|M.gilvum_PYR-GCK ------------------DLWALRYPDTHELYLRDRAAGESG---RFSLR MSMEG_6248|M.smegmatis_MC2_155 -----------------------------------------------RLL TH_0065|M.thermoresistible__bu -----------------------------------------------RLL MLBr_00371|M.leprae_Br4923 IVLDEQRLSDQELREIDKVFVVACGTAYHSGLLAKYTIEHWTRLPVEVEL MAB_3743c|M.abscessus_ATCC_199 IVLDEQRLSDQELRDIDKVFVVACGTAFHSGLLAKYAIEHWTRLPVEIEL Mvan_2921|M.vanbaalenii_PYR-1 -------------------QLIAVHAHARSVLLDEDIEEISATDLPVEHL Mb1090|M.bovis_AF2122/97 SKRIRAHSTHLRERSSVVFATEPMDDNPRWRLLDAGE------------- Rv1061|M.tuberculosis_H37Rv SKRIRAHSTHLRERSSVVFATEPMDDNPRWRLLDAGE------------- MAV_1188|M.avium_104 TIRIHARSQQLRTRPSVVFATERMDADPRWRLLEPGE------------- MMAR_4405|M.marinum_M TKRIRARSEHLRTRPSVVFASQPMDDDPRWRLLDPGE------------- MUL_0220|M.ulcerans_Agy99 TKRIRARSEHLRTRPSVVFASQPMDDDPRWRLLDPGE------------- Mflv_2003|M.gilvum_PYR-GCK SNRIRTGSAHLENSPSVVFASEAMDDG-AWQLLEAGE------------- MSMEG_6248|M.smegmatis_MC2_155 ATTWGDTLSVLHRPDGVVLASEPYDDDPGWSDIPDRH------------- TH_0065|M.thermoresistible__bu ATTWGDTLSVLAGDDGVVLASEPYDDDPRWRDVPDRH------------- MLBr_00371|M.leprae_Br4923 ASEFRYRDPVLDRSTLVVAISQSGETADTLEAVRHAKEQKAKVLAICNTN MAB_3743c|M.abscessus_ATCC_199 ASEFRYRDPVLDRSTLVVAISQSGETADTLEAVRHAKEQKAKVLAVCNTN Mvan_2921|M.vanbaalenii_PYR-1 EDYFSLR--VARPDDATVVIGSTGFGDLDWSPLPPES------------- .* . : Mb1090|M.bovis_AF2122/97 ----------------------------LVHVDAALRVNRSLVLPDPPRH Rv1061|M.tuberculosis_H37Rv ----------------------------LVHVDAALRVNRSLVLPDPPRH MAV_1188|M.avium_104 ----------------------------LVHVDAGLRVTRRLVLPDPPRQ MMAR_4405|M.marinum_M ----------------------------LVHVDVDLRITRSLALPDPPRH MUL_0220|M.ulcerans_Agy99 ----------------------------LVHVDVDLRITRSLALPDPPRH Mflv_2003|M.gilvum_PYR-GCK ----------------------------VIHVGPDLTIHRRMVLPEPPAH MSMEG_6248|M.smegmatis_MC2_155 ----------------------------LVDVRDAHVVVTPL-------- TH_0065|M.thermoresistible__bu ----------------------------LVEVTGAGVEMMALEGTA---- MLBr_00371|M.leprae_Br4923 GSQIPRECDAVLYTRAGPEIGVASTKTFLAQVAANYLLGLALAQARGTKY MAB_3743c|M.abscessus_ATCC_199 GSQIPRECDAVLYTRAGPEIGVAATKTFLAQVTANYIVGLALAQARGTKY Mvan_2921|M.vanbaalenii_PYR-1 ----------------------------VASVALDDLSMTVVPIMAD--- : * : Mb1090|M.bovis_AF2122/97 PIRRE----------DLSEPVLHAQHTSA--------------------- Rv1061|M.tuberculosis_H37Rv PIRRE----------DLSEPVLHAQHTSA--------------------- MAV_1188|M.avium_104 LLRRD----------ELSTPVRDSQHALPDTRRAG--------------- MMAR_4405|M.marinum_M RLRLA----------DLGPEVQEALHPPA--------------------- MUL_0220|M.ulcerans_Agy99 RLRLA----------DLGPEVQEALHPPA--------------------- Mflv_2003|M.gilvum_PYR-GCK RMERS----------DLTAAAASAQHPMG--------------------- MSMEG_6248|M.smegmatis_MC2_155 -------------------------------------------------- TH_0065|M.thermoresistible__bu -------------------------------------------------- MLBr_00371|M.leprae_Br4923 PDEVQREYRELEAMPDLVARVIAGMGPVADLAYRFAQSTTVLFLGRHVGY MAB_3743c|M.abscessus_ATCC_199 PDEVAREYHELEAMPELIERVISQMDPVADLARQYAQSSSILFLGRHVGY Mvan_2921|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1090|M.bovis_AF2122/97 -------------------------------------------------- Rv1061|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1188|M.avium_104 -------------------------------------------------- MMAR_4405|M.marinum_M -------------------------------------------------- MUL_0220|M.ulcerans_Agy99 -------------------------------------------------- Mflv_2003|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_6248|M.smegmatis_MC2_155 -------------------------------------------------- TH_0065|M.thermoresistible__bu -------------------------------------------------- MLBr_00371|M.leprae_Br4923 PVALEGALKLKELAYMHAEGFAAGELKHGPIALIEENLPVIVVMPSPKGS MAB_3743c|M.abscessus_ATCC_199 PVALEGALKLKELAYMHAEGFAAGELKHGPIALIEEGLPVIVVMPSPKGM Mvan_2921|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1090|M.bovis_AF2122/97 -------------------------------------------------- Rv1061|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1188|M.avium_104 -------------------------------------------------- MMAR_4405|M.marinum_M -------------------------------------------------- MUL_0220|M.ulcerans_Agy99 -------------------------------------------------- Mflv_2003|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_6248|M.smegmatis_MC2_155 -------------------------------------------------- TH_0065|M.thermoresistible__bu -------------------------------------------------- MLBr_00371|M.leprae_Br4923 AMLHAKLLSNIREIQTRGAVTIVIAEEGDDTVRLYADHLIELPAVSTLLQ MAB_3743c|M.abscessus_ATCC_199 GLLHSKLLSNIREIQARGARTIVIAEEGDETIRPYADHLIEIPAVSTLYQ Mvan_2921|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1090|M.bovis_AF2122/97 ------------------------------------ Rv1061|M.tuberculosis_H37Rv ------------------------------------ MAV_1188|M.avium_104 ------------------------------------ MMAR_4405|M.marinum_M ------------------------------------ MUL_0220|M.ulcerans_Agy99 ------------------------------------ Mflv_2003|M.gilvum_PYR-GCK ------------------------------------ MSMEG_6248|M.smegmatis_MC2_155 ------------------------------------ TH_0065|M.thermoresistible__bu ------------------------------------ MLBr_00371|M.leprae_Br4923 PLLSTIPLQVFAASVAQARGYDVDKPRNLAKSVTVE MAB_3743c|M.abscessus_ATCC_199 PLLSTIPMQVFAAAVAQARGYDVDKPRNLAKSVTVE Mvan_2921|M.vanbaalenii_PYR-1 ------------------------------------