For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDSDERPTAELLRDGFRWFAQCLEIRSAAAGEPDLSPGAAMTMSYLDAAPVKPSDLARRMQVSRQRVHAV LRELSAAGLVELVRDPTSGRDKLIRVTPAGKRRLRRVAAALAELDQRAAEQLGAEDLALLRQLLIRLVAI PRPR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_0485 | - | - | 100% (144) | MarR-family protein transcriptional regulator |
M. avium 104 | MAV_5249 | - | 2e-10 | 32.17% (115) | transcriptional regulator, MarR family protein |
M. avium 104 | MAV_0057 | - | 3e-07 | 33.33% (114) | transcriptional regulator, MarR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0043c | - | 1e-07 | 34.21% (114) | MarR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_2302 | - | 4e-09 | 26.36% (110) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0042c | - | 1e-07 | 34.21% (114) | MarR family transcriptional regulator |
M. leprae Br4923 | MLBr_02696 | - | 1e-05 | 29.82% (114) | putative MarR-family regulatory protein |
M. abscessus ATCC 19977 | MAB_0326 | - | 5e-08 | 33.04% (115) | MarR family transcriptional regulator |
M. marinum M | MMAR_0228 | - | 4e-09 | 33.64% (107) | hypothetical protein MMAR_0228 |
M. smegmatis MC2 155 | MSMEG_6913 | - | 2e-07 | 34.38% (96) | putative transcriptional regulatory protein |
M. thermoresistible (build 8) | TH_0729 | - | 3e-05 | 32.61% (92) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4886 | - | 7e-10 | 34.58% (107) | hypothetical protein MUL_4886 |
M. vanbaalenii PYR-1 | Mvan_4344 | - | 3e-10 | 29.31% (116) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2302|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4344|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_0228|M.marinum_M -------------------------------------------------- MUL_4886|M.ulcerans_Agy99 -------------------------------------------------- Mb0043c|M.bovis_AF2122/97 ---MSVVRSIG-KKMQRISGPNALAVKG---------------------- Rv0042c|M.tuberculosis_H37Rv ---MSVVRSIG-KKMQRISGPNALAVKG---------------------- MLBr_02696|M.leprae_Br4923 MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP MSMEG_6913|M.smegmatis_MC2_155 -------------------------------------------------- TH_0729|M.thermoresistible__bu -------------------------------------------------- MAV_0485|M.avium_104 -------------------------------------------------- MAB_0326|M.abscessus_ATCC_1997 -------------------------------------------------- Mflv_2302|M.gilvum_PYR-GCK -----------------------------MDEIPATAVLMFMAHRDVETR Mvan_4344|M.vanbaalenii_PYR-1 -----------------------------MDAQPGTAVLMYIAHREVESR MMAR_0228|M.marinum_M -----------------------MRRVLDAAWEPTVPALMQLVAATAAPR MUL_4886|M.ulcerans_Agy99 -----------------------MRRVLDAAWEPTVPALMQLVAATAAPR Mb0043c|M.bovis_AF2122/97 ---RPTQVYGHT------HVRLDCRFMADSEFTAPEVTQLAEGLHRALSK Rv0042c|M.tuberculosis_H37Rv ---RPTQVYGHT------HVRLDCRFMADSEFTAPEVTQLAEGLHRALSK MLBr_02696|M.leprae_Br4923 PHLRPPLQLAHTRSLNARHIALNCRLMADSEFTAHEVTELADGLHRALSK MSMEG_6913|M.smegmatis_MC2_155 --------------------------MAE---TEPQVTELAGELQRVLSK TH_0729|M.thermoresistible__bu ----------------------------MKPPAVDPSTSLGADLLWVVSR MAV_0485|M.avium_104 ----------------------------MDSDERPTAELLRDGFRWFAQC MAB_0326|M.abscessus_ATCC_1997 --------------------------MSESDEIEPLGYLMFRAGAVMRPR : Mflv_2302|M.gilvum_PYR-GCK VMAALGQAG-----HDDITMAQSRLMQRLDPGG-MRLTELAEQARVTKQT Mvan_4344|M.vanbaalenii_PYR-1 VMAALARSG-----VGDVTVAQSRLLQRLDPGG-MRLTDLAEQARVTKQT MMAR_0228|M.marinum_M LRSAFAEAG-----LDGIRPAQAIGLVPLAGGG-LHASDLADRLGVSRQA MUL_4886|M.ulcerans_Agy99 LRSAFAAAG-----LDGIRPAQAIGLVPLAGGG-LHASDLADRLGVSRQA Mb0043c|M.bovis_AF2122/97 LISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT Rv0042c|M.tuberculosis_H37Rv LISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT MLBr_02696|M.leprae_Br4923 LFSILRRRTPNGAVSGELTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT MSMEG_6913|M.smegmatis_MC2_155 VFSVLRRGDTHRGTAGDLTLAQLSILLTLLEGGPIRMTELAARERVRTPT TH_0729|M.thermoresistible__bu INRLATQRIR-----LPLPVAQARLLSTIQDRGSARISDLAVLDHCSQPT MAV_0485|M.avium_104 LEIRSAAAG-----EPDLSPGAAMTMSYLDAAP-VKPSDLARRMQVSRQR MAB_0326|M.abscessus_ATCC_1997 VLAVLRPLG--------LGMPEFMCLRMLNENPGRTSAELARENNVSAQA : : : : ::** Mflv_2302|M.gilvum_PYR-GCK AGALIDQLERSGYVTRLPDPTDARARLVTLSDRGVEMCRRAGAEVGRVEA Mvan_4344|M.vanbaalenii_PYR-1 AGALVDQLERAGYVTRQPDPSDARARLVTLTDKGAEMCRRAGAEVARVEQ MMAR_0228|M.marinum_M VAQAVTALERHGYVLRAPDPADARARIIELTPRGRQALRVMRANALDAQR MUL_4886|M.ulcerans_Agy99 VAQAVAALERHGYVLRAPDPADARARIIELTPRGRQALRVMRANALDAQR Mb0043c|M.bovis_AF2122/97 TTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGESLANRRAALA Rv0042c|M.tuberculosis_H37Rv TTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGESLANRRAALA MLBr_02696|M.leprae_Br4923 TTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHGESLANRRAALT MSMEG_6913|M.smegmatis_MC2_155 TTVAIRRLEKLGLVKRSRDPSDLRAVLVDVTPQGLVQHRESLAARRADLA TH_0729|M.thermoresistible__bu MTTQVRRLEEAGLVSRTVDPDDGRAVRISITPEGVRTLAQVRADRAAAID MAV_0485|M.avium_104 VHAVLRELSAAGLVELVRDPTSGRDKLIRVTPAGKRRLRRVAAALAELDQ MAB_0326|M.abscessus_ATCC_1997 MNQVLNGLQNISLVSRPAVPASGRALPAKVTAKGKALLKRVESAIWAAED : *. . * . * :: * : Mflv_2302|M.gilvum_PYR-GCK EWRERLGDTAFDAMRDALVTLASE------------------------- Mvan_4344|M.vanbaalenii_PYR-1 EWRQHLGDDAYGALRAALLSLREITDPYL-------------------- MMAR_0228|M.marinum_M RWQKILGPQRLGELRETLQLLLDAESGA--------------------- MUL_4886|M.ulcerans_Agy99 RWQKILGPQRLGELRETLQLLLDAESGA--------------------- Mb0043c|M.bovis_AF2122/97 ALLSQLPRSDLETLRKALAPLERLASGEPASGPASNS--PARKRA---- Rv0042c|M.tuberculosis_H37Rv ALLSQLPRSDLETLRKALAPLERLASGEPASGPASNS--PARKRA---- MLBr_02696|M.leprae_Br4923 TMLSQLPTSDLNILKNALAPLQRLASGEPVSSPAGDS--PACKQA---- MSMEG_6913|M.smegmatis_MC2_155 ERLSKLSDEDLATLARALGPLERLAGQDEDKKNERETPKPAEQTS---- TH_0729|M.thermoresistible__bu PYIDRLSDTDRAVLADAVRVMRQLLADAADPAVLPADPPSRPHESTELR MAV_0485|M.avium_104 RAAEQLGAEDLALLRQLLIRLVAIPRPR--------------------- MAB_0326|M.abscessus_ATCC_1997 EMFSRLGVDDQRELRRILGRLIDAASENE-------------------- . * : : :