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MATTAAPSEGGLQHSLQKRHLTMIAIGGVIGAGLFVGSGATIQAAGPAAFLTYAITGVLIVLVMRMLGEM AVANPSTGSFADYSRRALGDWAGFSVGWLYWYFWVIVVGFEAVAGGKLIQDWLPHAPLWLIALLLMLAMT ATNLFSVRSYGEFEYWFASVKVAAIVAFLVAGTCYVLGLWPGKKLDFSNLTVHEGFMPHGPGAIFSSIVI VIFSMVGAEIATIAAAESKDPAKAISQATNSVIYRVAIFFVGSIFLIAVIVPWNSPELGTSPYVTAFKTM GIPAADHIMRVVVLTAVLSCLNSAMYTASRMLFVLAGRGEAPRSWLKVNARGVPVQAILASSFIGFVCVI LAYFFEHTVFLFLLNSSGAVILFVYLMIAISQYVLRRRTPEEKLLVKMWGYPALTILTAIGIVAILVAMG FQDATRTQLWTSLLSWGVILLLFAILRLTRRRTPEPGERTTR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4909 | - | - | 100% (462) | GABA permease GabP |
| M. abscessus ATCC 19977 | MAB_3866c | - | 5e-75 | 34.92% (441) | putative amino acid permease |
| M. abscessus ATCC 19977 | MAB_2535 | - | 8e-74 | 34.45% (447) | amino acid transporter |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0535 | gabP | 1e-164 | 65.67% (434) | GABA permease GabP |
| M. gilvum PYR-GCK | Mflv_1998 | - | 1e-171 | 66.59% (455) | amino acid permease-associated region |
| M. tuberculosis H37Rv | Rv0522 | gabP | 1e-164 | 65.67% (434) | GABA permease GabP |
| M. leprae Br4923 | MLBr_01305 | ansP2 | 1e-70 | 35.39% (438) | putative L-asparagine permease |
| M. marinum M | MMAR_0862 | gabP | 1e-162 | 64.97% (431) | GabA permease (gamma-aminobutyrate permease) GabP |
| M. avium 104 | MAV_4626 | - | 1e-166 | 65.60% (436) | gaba permease |
| M. smegmatis MC2 155 | MSMEG_5473 | - | 1e-165 | 66.97% (445) | transporter |
| M. thermoresistible (build 8) | TH_0471 | - | 9e-20 | 23.40% (483) | POSSIBLE CATIONIC AMINO ACID TRANSPORT INTEGRAL MEMBRANE |
| M. ulcerans Agy99 | MUL_4508 | gabP_1 | 1e-121 | 47.25% (455) | GabA permease GabP_1 |
| M. vanbaalenii PYR-1 | Mvan_1740 | - | 9e-21 | 23.78% (471) | amino acid permease-associated region |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1998|M.gilvum_PYR-GCK --------------------MSAAPT-----LKKALNQRQLTMIAIGGVI
MSMEG_5473|M.smegmatis_MC2_155 --------------------MGDTPA-----LKRALSQRQLRMIAIGGVI
MAB_4909|M.abscessus_ATCC_1997 --------------------MATTAAPSEGGLQHSLQKRHLTMIAIGGVI
Mb0535|M.bovis_AF2122/97 ------------------------------------------MIAIGGVI
Rv0522|M.tuberculosis_H37Rv ------------------------------------------MIAIGGVI
MMAR_0862|M.marinum_M ------------------------------------------MIAIGGVI
MAV_4626|M.avium_104 --------------------MAGTSQ-----LRQGLSQRQLSMIALGGVI
MUL_4508|M.ulcerans_Agy99 --------------------MAGADTEHEIALGKGLRQRHLSLIALGGVI
MLBr_01305|M.leprae_Br4923 ------MATLAESPEPKSGASRAGVLGEEAGYHKGLKPRQLQMIGIGGAI
TH_0471|M.thermoresistible__bu --------MTDRLRVKSVEQSIADTDEPDSRLRKDLSWWDLTVFGVSVVI
Mvan_1740|M.vanbaalenii_PYR-1 MVQEPGAQTVGRRRTKSVEQSIADTDEPSTRLRKELNWWDLTVFGVSVVI
::.:. .*
Mflv_1998|M.gilvum_PYR-GCK GAGLFVGSGVVIA-DTGPGAFLTYGMAGVLIIMVMRMLAEMAVANPSTGS
MSMEG_5473|M.smegmatis_MC2_155 GAGLFVGSGVVIG-DTGPGTFITYGLAGVLIIMVMRMLAEMAVANPSTGS
MAB_4909|M.abscessus_ATCC_1997 GAGLFVGSGATIQ-AAGPAAFLTYAITGVLIVLVMRMLGEMAVANPSTGS
Mb0535|M.bovis_AF2122/97 GAGLFVGSGVVIR-ATGPAAFLTYALCGALIVLVMRMLGEMAAANPSTGA
Rv0522|M.tuberculosis_H37Rv GAGLFVGSGVVIR-ATGPAAFLTYALCGALIVLVMRMLGEMAAANPSTGA
MMAR_0862|M.marinum_M GAGLFVGSGVVIR-ATGPAAFLTYALCGLLILLVMRMLAEMAAANPSTGS
MAV_4626|M.avium_104 GAGLFVGSGVVIK-DTGPAAFLTYALCGLLIVLVMRMLGEMAAANPSTGS
MUL_4508|M.ulcerans_Agy99 GAGLFVGSGVVIA-GTGPAAVISFLIAGLITMLIMRMLAEMAASQPVVGS
MLBr_01305|M.leprae_Br4923 GTGLFLGAGGRLA-KAGPGLFLVYAVCGVFVFLILRALGELVLHRPSSGS
TH_0471|M.thermoresistible__bu GAGIFTVTASTAGNITGPAISVSFIIAAIACGLAALCYAEFASTVPVAGS
Mvan_1740|M.vanbaalenii_PYR-1 GAGIFTITASTAANITGPAISLSFIIAAIACGLAALCYAEFASTVPVAGS
*:*:* :. :**. : : : . : .*:. * *:
Mflv_1998|M.gilvum_PYR-GCK FADYSRNALGHWAGFSVGWLYWYFWVIVVGFEAIAGAKIVQYWM------
MSMEG_5473|M.smegmatis_MC2_155 FADYSRNALGNWAGFSVGWLYWYFWVIVVGFEAIAGAKIIQFWI------
MAB_4909|M.abscessus_ATCC_1997 FADYSRRALGDWAGFSVGWLYWYFWVIVVGFEAVAGGKLIQDWLP-----
Mb0535|M.bovis_AF2122/97 FADYAAKALGGWAGFSVGWLYWYFWVIVVGFEAVAGGKVLTYWI------
Rv0522|M.tuberculosis_H37Rv FADYAAKALGGWAGFSVGWLYWYFWVIVVGFEAVAGGKVLTYWI------
MMAR_0862|M.marinum_M FADFAADALGGWAGFSVGWLYWYFWVIVVGFEAVAGAKVLMYWI------
MAV_4626|M.avium_104 FADYAAAALGRWAGFSVAWLYWYFWVIVVGFEAVAGGKVLNYWF------
MUL_4508|M.ulcerans_Agy99 FYVYARQALGPRGGFVTGWMYWYFFVVVVAVETVAGGRILQLWVP-----
MLBr_01305|M.leprae_Br4923 FVSYAREFFGEKAAYVVGWLYFLDWAMTAIVDTTAIATYLHRWTIFT---
TH_0471|M.thermoresistible__bu AYTFSYATFGEFVAWIIGWDLILEFSVAAAVVAKGWSSYLGEVFEFAGAT
Mvan_1740|M.vanbaalenii_PYR-1 AYTFSYATFGEFVAWIIGWDLILEFAVAAAVVAKGWSSYLGTVFGFAGGT
:: :* .: .* : :.. . : . . :
Mflv_1998|M.gilvum_PYR-GCK ----DVPLWLSALIFMVLMTATNLFSVASYGEFEFWFAGIKVAAIIAFIA
MSMEG_5473|M.smegmatis_MC2_155 ----DVPLWLTALILLIAMTATNLFSVSSFGEFEYWFAGVKVAAILAFIG
MAB_4909|M.abscessus_ATCC_1997 ----HAPLWLIALLLMLAMTATNLFSVRSYGEFEYWFASVKVAAIVAFLV
Mb0535|M.bovis_AF2122/97 ----DAPLWLASLCLMMMMTATNLVSVSSFGEFEFWFAGVKVATIVGFLV
Rv0522|M.tuberculosis_H37Rv ----DAPLWLASLCLMMMMTATNLVSVSSFGEFEFWFAGVKVATIVGFLV
MMAR_0862|M.marinum_M ----HAPLWLLSLCLMIMMTATNLFSVSSFGEFEFWFAGIKVAVIVVFLA
MAV_4626|M.avium_104 ----HAPLWVLSLGLMLLMTATNLFSVSSFGEFEFWFAGIKVATIVIFLV
MUL_4508|M.ulcerans_Agy99 ----QIPLWVLSLGLLLALTATNLVSARSFGEFEYWFSSIKVIAVVVFLG
MLBr_01305|M.leprae_Br4923 ----ALPQWTLALLALAVVLVMNLISVEWFGELEFWAALIKVCALMAFLV
TH_0471|M.thermoresistible__bu TRLGPITLDWGALLIIGFVTVLLATGTKLSANVSLAITVIKVGVVLLVVI
Mvan_1740|M.vanbaalenii_PYR-1 TEVAGFQLDWGALVIIALVTLILVMGTKLSAGVSLAITAVKVSVVLLVVI
:* : : .. . .. : :** .:: .:
Mflv_1998|M.gilvum_PYR-GCK VGAAFVLGLWP---------------GKGADFSNLTSHGGFMPLGFGAIT
MSMEG_5473|M.smegmatis_MC2_155 LGAFYVLGVWP---------------DKDLDFSNLTAHGGFFPLGATAVT
MAB_4909|M.abscessus_ATCC_1997 AGTCYVLGLWP---------------GKKLDFSNLTVHEGFMPHGPGAIF
Mb0535|M.bovis_AF2122/97 LGTAFAFGLLP---------------GHGMDFSNLSAHGGFFPDGVGAVF
Rv0522|M.tuberculosis_H37Rv LGTAFAFGLLP---------------GHGMDFSNLSAHGGFFPDGVGAVF
MMAR_0862|M.marinum_M LGAAFAFGLLP---------------GHHMDFGNLTSHGGLFPMGVEPVF
MAV_4626|M.avium_104 VGAAYVIGLVP---------------GHHDGLTNLVSHGGFFPRGVGAVF
MUL_4508|M.ulcerans_Agy99 LGLLWTMGLWP---------------SATPGLGKLVDFGGFAPLGWGAVL
MLBr_01305|M.leprae_Br4923 VGTIFLGGRYPV-------------DGHNTGLSLWTSHGGLFPTGVAPLI
TH_0471|M.thermoresistible__bu VGAFFIKAANYTPFIPPAEAGGEAGRSLDQSLFSLITGAEGSSYGWYGLL
Mvan_1740|M.vanbaalenii_PYR-1 VGAFYIKAENFSPFVPAPEEGGSGGTGTEQSLFSLLTGAEGSHYGWYGVL
* : . . .: * :
Mflv_1998|M.gilvum_PYR-GCK VGIVTVIFSMVGAEIATIAAAESQDPERAVAKAANSVILRILIFYVGAVL
MSMEG_5473|M.smegmatis_MC2_155 VGVVTVIFSMVGAEIATIAAAESSDPERAVAKAANSVILRIALFFVGSAF
MAB_4909|M.abscessus_ATCC_1997 SSIVIVIFSMVGAEIATIAAAESKDPAKAISQATNSVIYRVAIFFVGSIF
Mb0535|M.bovis_AF2122/97 AAIVVAIFSMTGTEVVTIAAAEAPDPQRAVQRAMSTVVARIVIFFVGSVF
Rv0522|M.tuberculosis_H37Rv AAIVVAIFSMTGTEVVTIAAAEAPDPQRAVQRAMSTVVARIVIFFVGSVF
MMAR_0862|M.marinum_M ATVVIAIFSMTGTEIITIAAAETPDPEYAVQRAMSTVVARIAVFFVGSVF
MAV_4626|M.avium_104 AAIVVVIFSMVGAEIVTVAAAESRDPRRAVQKATRSVVTRIGIFFVGSVF
MUL_4508|M.ulcerans_Agy99 AAVVPCVAFYTGAEIVTVAAAESAEPEGSVSRAMKSIVARIIAFYVGSIL
MLBr_01305|M.leprae_Br4923 VVSSGVMFAYAAVELVGTAAGETVEPKKIMPRAINSVIARIAIFYVGSVI
TH_0471|M.thermoresistible__bu AGASIVFFAFIGFDIIATTAEETKNPQRDVARGIMATLGIVTVLYVAVSL
Mvan_1740|M.vanbaalenii_PYR-1 AGASIVFFAFIGFDIVATTAEETRNPQRDVPRGILASLAIVTVLYVAVAV
. . :: :* *: :* : :. : : : ::*. .
Mflv_1998|M.gilvum_PYR-GCK LLVLIVPWNDESVS--ASPFVAAFNAMGIPYADHVMNAVVLTAVLSCLNS
MSMEG_5473|M.smegmatis_MC2_155 LLVTILPWNSDQTV--ASPFVAAFTEMGIPYADHIMNAVVLTAVLSCLNS
MAB_4909|M.abscessus_ATCC_1997 LIAVIVPWNSPELG--TSPYVTAFKTMGIPAADHIMRVVVLTAVLSCLNS
Mb0535|M.bovis_AF2122/97 LLTVILPWNSLELG--ASPYVAALRHMGIGGADQIMNAVVLTAVLSCLNS
Rv0522|M.tuberculosis_H37Rv LLTVILPWNSLELG--ASPYVAALRHMGIGGADQIMNAVVLTAVLSCLNS
MMAR_0862|M.marinum_M LLVVILPWDSIDPG--ASPYVAAFQRMGIPGADQIMNAVVVTAVLSCLNS
MAV_4626|M.avium_104 LLVAILPWDSVELG--ASPYVAALKHLGLAGADQVMNAVVLTAVLSCLNS
MUL_4508|M.ulcerans_Agy99 VVVAVVPWNTKSVG--VSPYASALAVIGIPGVTTVMNAIVLTAVLSCLNS
MLBr_01305|M.leprae_Br4923 LLALLLPYSAFKAS--ESPFVTFFSKVGFYGAGDLMNIVVLTAALSSLNA
TH_0471|M.thermoresistible__bu VLTGMVHYTELRAAGENANLATAFAANGIDWAAKVISIGALAGLTTVVIV
Mvan_1740|M.vanbaalenii_PYR-1 VLTGMVSYTELRDA-ETQNLATAFSLNGVDWAAKVISIGALAGLTTVVIV
::. :: : .: : *. . :: .::. : :
Mflv_1998|M.gilvum_PYR-GCK GMYTASRMLFVLAARREAPAALVKVTNRGVPANAILASSVVGFLCVIAAA
MSMEG_5473|M.smegmatis_MC2_155 GMYTASRMLFVLAARREAPPQLVAVTRRGVPATAILTSSVIGLICVIAAA
MAB_4909|M.abscessus_ATCC_1997 AMYTASRMLFVLAGRGEAPRSWLKVNARGVPVQAILASSFIGFVCVILAY
Mb0535|M.bovis_AF2122/97 GLYTASRMLFVLAARQEAPAQLVKVNRRGVPTFAIMGSSVVGFLCVIMAW
Rv0522|M.tuberculosis_H37Rv GLYTASRMLFVLAARQEAPAQLVKVNRRGVPTFAIMGSSVVGFLCVIMAW
MMAR_0862|M.marinum_M GLYTASRMMFVLAGRREAPASLVKVSRRGVPYVAILASSAVGFLCVIMAW
MAV_4626|M.avium_104 GLYTASRMLFVLAERGEAPARLVRLSGRGVPHIAILCSSAVGFLCVVMAR
MUL_4508|M.ulcerans_Agy99 ALYTTSRMAFALTIHGDGPRFFTKLSRSGVPRRAIILGTTVGYASVVATY
MLBr_01305|M.leprae_Br4923 GLYATGRVMHSIAINGSGPKFTARMSKNGVPYGGILLAAVICLCGVALNA
TH_0471|M.thermoresistible__bu LVLGQTRVLFAMSRDGLLPRPLSKTGPRGTP---VRITVLVGALVAIAAS
Mvan_1740|M.vanbaalenii_PYR-1 LVLGQTRVLFAMSRDGLLPRQLAKTGEHGTP---VRITLIVGAVVAVTAT
: *: . :: * *.* : : .
Mflv_1998|M.gilvum_PYR-GCK VSPDTIFAFLLNSSGAIILFVYLLIAISQIVLRYRTPDSK---LRVKMWL
MSMEG_5473|M.smegmatis_MC2_155 FFPDTIFQFLLNSSGAVILFVYLLIAISQIVLRRRTDDSM---LKVKMWL
MAB_4909|M.abscessus_ATCC_1997 FFEHTVFLFLLNSSGAVILFVYLMIAISQYVLRRRTPEEK---LLVKMWG
Mb0535|M.bovis_AF2122/97 VSPATVFVFLLNSSGAVILFVYLLIALSQIVLRRQTSGQN---LGVRMWL
Rv0522|M.tuberculosis_H37Rv VSPATVFVFLLNSSGAVILFVYLLIALSQIVLRRQTSGQN---LGVRMWL
MMAR_0862|M.marinum_M VAPTTVFIFLLNSSGAVLLFVYLLIAFSQIVLRGRTPPEK---LRVRMWF
MAV_4626|M.avium_104 VAPNTVFLFLLNSSGAIILFVYWLIALSQIVLRRRTPAER---LSVKMWF
MUL_4508|M.ulcerans_Agy99 VWGDVVFEFLVNSYGAVALFVYLIIAISQVILRRRAEREDPGGLRLKMWL
MLBr_01305|M.leprae_Br4923 FNPGQAFEIVLSVAALGIIAGWGTIVLCQLRLHKMAKAGIMRRPRFRMPL
TH_0471|M.thermoresistible__bu VFPVGNLEEMVNIG---TLFAFALVSAGVIVLRRTRPDLK------RGFR
Mvan_1740|M.vanbaalenii_PYR-1 VFPIGKLEEMVNIG---TLFAFVLVSAGVLVLRRTRPDLK------RGFR
. : ::. : : : *: :
Mflv_1998|M.gilvum_PYR-GCK FPVLSGLTALGILAILVQMFIDT-ALRSQLVLSLLSWAVVIALFAANKWF
MSMEG_5473|M.smegmatis_MC2_155 FPVLSILTAAAIFAILVQMFVQGGDNRSALVLSLASWAVVIVLFWLNRMF
MAB_4909|M.abscessus_ATCC_1997 YPALTILTAIGIVAILVAMGFQD-ATRTQLWTSLLSWGVILLLFAILRLT
Mb0535|M.bovis_AF2122/97 FPGLSIVTVTGIVAVLARMAFDY-AARSQLWLSLLSWAVVVGCYLVTTLV
Rv0522|M.tuberculosis_H37Rv FPGLSIVTVTGIVAVLARMAFDY-AARSQLWLSLLSWAVVVGCYLVTTLV
MMAR_0862|M.marinum_M FPWLPILTVVGIVVVLVRMAFDD-AAHSQFWLSMLSWVAVLGIYGITRLI
MAV_4626|M.avium_104 FPVLSVLTLAGITAVLVQMAFDA-TARSQLWLSLLSWAVVVALYFVARSR
MUL_4508|M.ulcerans_Agy99 FPWLSYATIALMASVILAMAALS-ATRSRFLMSGVTLVLILATYEVRRRR
MLBr_01305|M.leprae_Br4923 APYSGYLTLAFLFAVLVVMAFDKPIGTWTVASLIVIVPALIAGWYSIRKR
TH_0471|M.thermoresistible__bu VPFVPWLPLAAIAACLWLMLNLTGLTWVRFLGWMALGLVLYFFYGRHHSM
Mvan_1740|M.vanbaalenii_PYR-1 TPWVPLLPILAIAACVWLMLNLTGLTWIRFLIWMAIGVVVYFLYGRRHSL
* . : : * . : :
Mflv_1998|M.gilvum_PYR-GCK VKKRPAEGDSGAPTGPPHRVLVLANRTVDSDELLAELSRIGADQTAEYLV
MSMEG_5473|M.smegmatis_MC2_155 VSRRPQTPDVAPTSEHPHRVLVLANQTVESDELLDELRRIGADRDTTYYV
MAB_4909|M.abscessus_ATCC_1997 RRRTPEPGERTTR-------------------------------------
Mb0535|M.bovis_AF2122/97 RR-PLNRPW-----------------------------------------
Rv0522|M.tuberculosis_H37Rv RR-PLNRPW-----------------------------------------
MMAR_0862|M.marinum_M NRNSRMRTRGQTSDV-----------------------------------
MAV_4626|M.avium_104 GR-VAAR-------------------------------------------
MUL_4508|M.ulcerans_Agy99 RVAVARNATVAARAFQPG-------------------------------V
MLBr_01305|M.leprae_Br4923 VMTIARERMGYTGPFP---------------------------------A
TH_0471|M.thermoresistible__bu LGRGMTDISARRTG------------------------------------
Mvan_1740|M.vanbaalenii_PYR-1 VGRRMG--------------------------------------------
Mflv_1998|M.gilvum_PYR-GCK VVPASAVDTGAAATHGPRDVTEATQEAATARLESTLAALRGKNLTVQGEL
MSMEG_5473|M.smegmatis_MC2_155 VVPASPIDTGVANTHGPLDISEATQQAAQERLDSTLATLRSGDFEATGTL
MAB_4909|M.abscessus_ATCC_1997 --------------------------------------------------
Mb0535|M.bovis_AF2122/97 --------------------------------------------------
Rv0522|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_0862|M.marinum_M --------------------------------------------------
MAV_4626|M.avium_104 --------------------------------------------------
MUL_4508|M.ulcerans_Agy99 PMPACAQRCG----------------------------------------
MLBr_01305|M.leprae_Br4923 IANPPVQPSERSHSQNP---------------------------------
TH_0471|M.thermoresistible__bu --------------------------------------------------
Mvan_1740|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1998|M.gilvum_PYR-GCK GDYRPLRALDHAVAEFGPDQIVIATLPPEFSMWHRFDVVDRARAQFTVPV
MSMEG_5473|M.smegmatis_MC2_155 GEYRPLRALAKAVETFRPDQIVISTLPPEESVWQRFDVVDRARAEHHLPV
MAB_4909|M.abscessus_ATCC_1997 --------------------------------------------------
Mb0535|M.bovis_AF2122/97 --------------------------------------------------
Rv0522|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_0862|M.marinum_M --------------------------------------------------
MAV_4626|M.avium_104 --------------------------------------------------
MUL_4508|M.ulcerans_Agy99 --------------------------------------------------
MLBr_01305|M.leprae_Br4923 --------------------------------------------------
TH_0471|M.thermoresistible__bu --------------------------------------------------
Mvan_1740|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1998|M.gilvum_PYR-GCK THVVATSAVGNQVPR
MSMEG_5473|M.smegmatis_MC2_155 THVVSRVRATEPAP-
MAB_4909|M.abscessus_ATCC_1997 ---------------
Mb0535|M.bovis_AF2122/97 ---------------
Rv0522|M.tuberculosis_H37Rv ---------------
MMAR_0862|M.marinum_M ---------------
MAV_4626|M.avium_104 ---------------
MUL_4508|M.ulcerans_Agy99 ---------------
MLBr_01305|M.leprae_Br4923 ---------------
TH_0471|M.thermoresistible__bu ---------------
Mvan_1740|M.vanbaalenii_PYR-1 ---------------