For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4705c (-)

annotation: membrane protein MmpS
coordinates: 4816860 - 4817270
length: 136

WIPLVLVVVGIAGGFTVSRLHGVFGNERRPEYATADREEKRPHDPKYLVYEVFGPPGTVATISYFDADAE
PQVIRQAALPWSVEFPITEATAMGNITAQGDTDSIGCRILVGDKVKDEKIRYGVSALTFCMLKAA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4705c--100% (136)membrane protein MmpS
M. abscessus ATCC 19977MAB_4117c-5e-4256.62% (136) MmpS family protein
M. abscessus ATCC 19977MAB_2300-1e-2943.61% (133) putative membrane protein, MmpS

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0459cmmpS43e-4254.81% (135) membrane protein
M. gilvum PYR-GCKMflv_3434-7e-2945.59% (136) membrane family protein
M. tuberculosis H37RvRv0451cmmpS43e-4254.81% (135) membrane protein
M. leprae Br4923MLBr_02377-3e-4053.68% (136) hypothetical protein MLBr_02377
M. marinum MMMAR_0772mmpS4_28e-3751.11% (135) membrane protein MmpS4_2
M. avium 104MAV_3247-2e-4052.59% (135) MmpS4 protein
M. smegmatis MC2 155MSMEG_0380-4e-4457.35% (136) MmpS4 protein
M. thermoresistible (build 8)TH_3673-7e-4357.04% (135) PUTATIVE MmpS4 protein
M. ulcerans Agy99MUL_2383mmpS47e-3044.85% (136) membrane protein MmpS4
M. vanbaalenii PYR-1Mvan_3834-6e-3245.19% (135) hypothetical protein Mvan_3834

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_0380|M.smegmatis_MC2_155      ----------------MRRLWIPLLVIAVVAVGGFTVSRLHNVFGAEKRP
TH_3673|M.thermoresistible__bu      ----------------LKRFWIPLLALVVFSSGGFAVSRLHGIFGSEKRP
MAB_4705c|M.abscessus_ATCC_199      -------------------MWIPLVLVVVGIAGGFTVSRLHGVFGNERRP
Mb0459c|M.bovis_AF2122/97           ---------------MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRP
Rv0451c|M.tuberculosis_H37Rv        ---------------MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRP
MMAR_0772|M.marinum_M               ---------------MLSRTWIVLVIVAVIIVGGFSVHRIRGFFASEKRE
MLBr_02377|M.leprae_Br4923          -MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRE
MAV_3247|M.avium_104                ----------------MKRLWIPLVIVAVVVAGGLTVSRLHGIFGSEKRP
MUL_2383|M.ulcerans_Agy99           MPAGPRGGGCTEIVTVLKRAWLPLVLAVVFAVGGFAVSRVRGMFGSQQLP
Mvan_3834|M.vanbaalenii_PYR-1       ----------------MTRAWIPLVLVLVLVVGGLAVWRIRNIFGSHQLP
Mflv_3434|M.gilvum_PYR-GCK          ------------MIAIGKKVWLPLLIVVVVVIAGATVSRIRTFFGSEGII
                                                        *: *:   *   .*  * *::  *. .   

MSMEG_0380|M.smegmatis_MC2_155      SYADTK-AADSKPFDPKRLTYEVFGPPGTLADISYFDEDSNPQFVEKVSL
TH_3673|M.thermoresistible__bu      TYAAAL-QNEVTTFNPKRLTYEVFGPPGTTASISYFDENTDPQFIENVAL
MAB_4705c|M.abscessus_ATCC_199      EYATAD-REEKRPHDPKYLVYEVFGPPGTVATISYFDADAEPQVIRQAAL
Mb0459c|M.bovis_AF2122/97           SYSDTN-LENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVL
Rv0451c|M.tuberculosis_H37Rv        SYSDTN-LENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVL
MMAR_0772|M.marinum_M               SYSDSN-LDN-KPFNPKEITYEVFGPPGTVADISYFDVNSDPQQVEGAVL
MLBr_02377|M.leprae_Br4923          SYADSN-LGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQL
MAV_3247|M.avium_104                SYADTR-QQDTKPFNPKHVKYEVFGPAGAMADISYFDANGEPQHINGVEL
MUL_2383|M.ulcerans_Agy99           TYADSTPAGSVSSSGPKRVRYEIFGAPGTIADINYMDPAGEAQQLNDVAL
Mvan_3834|M.vanbaalenii_PYR-1       TYAGSMSEDSNKSD-PKIVRYEIFGDPGATADINYIDDEGDPNQIVGATL
Mflv_3434|M.gilvum_PYR-GCK          ETPRNF-ADLPEPFDPKVVRYEIIGN-GSYADVNYLDLDAKPQRVDGAAL
                                      .         .  ** : **::*  *: * :.*:*   ..: :  . *

MSMEG_0380|M.smegmatis_MC2_155      PWSLHFDIGKTTAVGSIMAQGDSDTIGCRIIVDDEVKAEKVSNQTNAFTS
TH_3673|M.thermoresistible__bu      PWSLQMEISKTTALGSIMAQGDSNSIGCRIMVDDEVKEEKVSNQVNAFAS
MAB_4705c|M.abscessus_ATCC_199      PWSVEFPITEATAMGNITAQGDTDSIGCRILVGDKVKDEKIRYGVSALTF
Mb0459c|M.bovis_AF2122/97           PWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTY
Rv0451c|M.tuberculosis_H37Rv        PWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTY
MMAR_0772|M.marinum_M               PWTLHFTTNLAAVMGNLVAQGNTNSIGCRITVDGKVKAERVSNEVNAYTY
MLBr_02377|M.leprae_Br4923          PWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTY
MAV_3247|M.avium_104                PWTFDISTTLPSIVGNVVAQGNSDSLGCRILVDGVVKTERISHELNAFTY
MUL_2383|M.ulcerans_Agy99           PWSIEVETDAPSMVANIIAQANTDFLGCRISSGGEVKDERTSSAVSAYVY
Mvan_3834|M.vanbaalenii_PYR-1       PWSIEVETNSPAMVGNVVAQGDSDFIGCRISADGVVKDERTAHNVSAYVY
Mflv_3434|M.gilvum_PYR-GCK          PWSLTLETTEPSAAPNIVAQGDSSTITCRIFVDDELKDERTTDGLNAQTF
                                    **:. .    .:   .: **.::. : ***  .. :: *:     .* . 

MSMEG_0380|M.smegmatis_MC2_155      CLLKAA
TH_3673|M.thermoresistible__bu      CLLQAA
MAB_4705c|M.abscessus_ATCC_199      CMLKAA
Mb0459c|M.bovis_AF2122/97           CLVKSA
Rv0451c|M.tuberculosis_H37Rv        CLVKSA
MMAR_0772|M.marinum_M               CLVKSA
MLBr_02377|M.leprae_Br4923          CLVKSA
MAV_3247|M.avium_104                CVLTAT
MUL_2383|M.ulcerans_Agy99           CIAKSA
Mvan_3834|M.vanbaalenii_PYR-1       CFTKSA
Mflv_3434|M.gilvum_PYR-GCK          CFVKSA
                                    *.  ::