For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LKRLWIPLVIVAVVVAGGLTVSRLHGIFGSEKRPSYADTRQQDTKPFNPKHVKYEVFGPAGAMADISYFD ANGEPQHINGVELPWTFDISTTLPSIVGNVVAQGNSDSLGCRILVDGVVKTERISHELNAFTYCVLTAT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_3247 | - | - | 100% (139) | MmpS4 protein |
| M. avium 104 | MAV_3864 | - | 3e-36 | 51.47% (136) | MmpS4 protein |
| M. avium 104 | MAV_2511 | - | 3e-32 | 44.12% (136) | MmpS5 protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0459c | mmpS4 | 9e-51 | 61.03% (136) | membrane protein |
| M. gilvum PYR-GCK | Mflv_2704 | - | 2e-35 | 48.20% (139) | membrane family protein |
| M. tuberculosis H37Rv | Rv0451c | mmpS4 | 9e-51 | 61.03% (136) | membrane protein |
| M. leprae Br4923 | MLBr_02377 | - | 2e-50 | 61.76% (136) | hypothetical protein MLBr_02377 |
| M. abscessus ATCC 19977 | MAB_4117c | - | 9e-44 | 55.88% (136) | MmpS family protein |
| M. marinum M | MMAR_0772 | mmpS4_2 | 3e-46 | 58.82% (136) | membrane protein MmpS4_2 |
| M. smegmatis MC2 155 | MSMEG_0380 | - | 2e-46 | 58.57% (140) | MmpS4 protein |
| M. thermoresistible (build 8) | TH_3673 | - | 1e-41 | 53.62% (138) | PUTATIVE MmpS4 protein |
| M. ulcerans Agy99 | MUL_2293 | mmpS4_1 | 3e-36 | 48.55% (138) | membrane transporter |
| M. vanbaalenii PYR-1 | Mvan_3834 | - | 2e-39 | 53.03% (132) | hypothetical protein Mvan_3834 |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_4117c|M.abscessus_ATCC_199 ---------------MR-LWIPLLVIAVIAVGGFTVSRLHGVFGNEKRPS
MSMEG_0380|M.smegmatis_MC2_155 ---------------MRRLWIPLLVIAVVAVGGFTVSRLHNVFGAEKRPS
TH_3673|M.thermoresistible__bu ---------------LKRFWIPLLALVVFSSGGFAVSRLHGIFGSEKRPT
Mb0459c|M.bovis_AF2122/97 --------------MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPS
Rv0451c|M.tuberculosis_H37Rv --------------MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPS
MMAR_0772|M.marinum_M --------------MLSRTWIVLVIVAVIIVGGFSVHRIRGFFASEKRES
MLBr_02377|M.leprae_Br4923 MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRES
MAV_3247|M.avium_104 ---------------MKRLWIPLVIVAVVVAGGLTVSRLHGIFGSEKRPS
MUL_2293|M.ulcerans_Agy99 -----------MFTFLKRAWVPIVVVIAVAIGGTAVDRLRGVFGSDEIFS
Mflv_2704|M.gilvum_PYR-GCK ---------------MSRAWIPLVLVIVLLVAGFTVWRLRNMFASHPLPT
Mvan_3834|M.vanbaalenii_PYR-1 ---------------MTRAWIPLVLVLVLVVGGLAVWRIRNIFGSHQLPT
: *: :: : .. .* * *::. *. . :
MAB_4117c|M.abscessus_ATCC_199 YADTNVSDAKSFDPKKMSYEVFGSPGNVADISYFDVNGDPLFIQKVPLPW
MSMEG_0380|M.smegmatis_MC2_155 YADTKAADSKPFDPKRLTYEVFGPPGTLADISYFDEDSNPQFVEKVSLPW
TH_3673|M.thermoresistible__bu YAAALQNEVTTFNPKRLTYEVFGPPGTTASISYFDENTDPQFIENVALPW
Mb0459c|M.bovis_AF2122/97 YSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPW
Rv0451c|M.tuberculosis_H37Rv YSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPW
MMAR_0772|M.marinum_M YSDSNLDN-KPFNPKEITYEVFGPPGTVADISYFDVNSDPQQVEGAVLPW
MLBr_02377|M.leprae_Br4923 YADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPW
MAV_3247|M.avium_104 YADTRQQDTKPFNPKHVKYEVFGPAGAMADISYFDANGEPQHINGVELPW
MUL_2293|M.ulcerans_Agy99 STGSSVETIVPFNPKQVTYEVFGPSGTAGSVSYLNKNAEPEEADFSTLPW
Mflv_2704|M.gilvum_PYR-GCK YAGSMSADTNKSDPKIVRYEIFGVPGATADINYIDDEGDANQIIGAPLPW
Mvan_3834|M.vanbaalenii_PYR-1 YAGSMSEDSNKSDPKIVRYEIFGDPGATADINYIDDEGDPNQIVGATLPW
: : :** : **:** .* ..:.*:: : :. ***
MAB_4117c|M.abscessus_ATCC_199 SVKFEIGKTTAVGSIMAQGDGSSIGCRIIVDDEVKSEKVTNQTNAFTSCL
MSMEG_0380|M.smegmatis_MC2_155 SLHFDIGKTTAVGSIMAQGDSDTIGCRIIVDDEVKAEKVSNQTNAFTSCL
TH_3673|M.thermoresistible__bu SLQMEISKTTALGSIMAQGDSNSIGCRIMVDDEVKEEKVSNQVNAFASCL
Mb0459c|M.bovis_AF2122/97 SLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCL
Rv0451c|M.tuberculosis_H37Rv SLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCL
MMAR_0772|M.marinum_M TLHFTTNLAAVMGNLVAQGNTNSIGCRITVDGKVKAERVSNEVNAYTYCL
MLBr_02377|M.leprae_Br4923 SLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCL
MAV_3247|M.avium_104 TFDISTTLPSIVGNVVAQGNSDSLGCRILVDGVVKTERISHELNAFTYCV
MUL_2293|M.ulcerans_Agy99 TRTITTTIPAIIANIVAQGNSDSIGCRITVNGDVKDEQSAQGHHAQTFCL
Mflv_2704|M.gilvum_PYR-GCK AIEVETDSPAMVGNIVAQGDGDFIGCRILSDGELKDERTIHNYTAYIYCF
Mvan_3834|M.vanbaalenii_PYR-1 SIEVETNSPAMVGNVVAQGDSDFIGCRISADGVVKDERTAHNVSAYVYCF
: . .: :..::***: . :**** :. :: *: : * *.
MAB_4117c|M.abscessus_ATCC_199 LKAA
MSMEG_0380|M.smegmatis_MC2_155 LKAA
TH_3673|M.thermoresistible__bu LQAA
Mb0459c|M.bovis_AF2122/97 VKSA
Rv0451c|M.tuberculosis_H37Rv VKSA
MMAR_0772|M.marinum_M VKSA
MLBr_02377|M.leprae_Br4923 VKSA
MAV_3247|M.avium_104 LTAT
MUL_2293|M.ulcerans_Agy99 VKAA
Mflv_2704|M.gilvum_PYR-GCK SKAT
Mvan_3834|M.vanbaalenii_PYR-1 TKSA
::