For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VIAIGKKVWLPLLIVVVVVIAGATVSRIRTFFGSEGIIETPRNFADLPEPFDPKVVRYEIIGNGSYADVN YLDLDAKPQRVDGAALPWSLTLETTEPSAAPNIVAQGDSSTITCRIFVDDELKDERTTDGLNAQTFCFVK SA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3434 | - | - | 100% (142) | membrane family protein |
M. gilvum PYR-GCK | Mflv_3028 | - | 6e-39 | 51.41% (142) | membrane family protein |
M. gilvum PYR-GCK | Mflv_2704 | - | 1e-28 | 43.38% (136) | membrane family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0696c | mmpS5 | 5e-58 | 74.45% (137) | hypothetical protein Mb0696c |
M. tuberculosis H37Rv | Rv0677c | mmpS5 | 5e-58 | 74.45% (137) | hypothetical protein Rv0677c |
M. leprae Br4923 | MLBr_02377 | - | 7e-31 | 43.80% (137) | hypothetical protein MLBr_02377 |
M. abscessus ATCC 19977 | MAB_4383c | - | 7e-39 | 52.11% (142) | putative membrane protein, MmpS |
M. marinum M | MMAR_1006 | mmpS5 | 6e-57 | 70.42% (142) | transmembrane proteinm, MmpS5 |
M. avium 104 | MAV_2511 | - | 6e-41 | 56.12% (139) | MmpS5 protein |
M. smegmatis MC2 155 | MSMEG_3495 | - | 9e-47 | 63.64% (143) | MmpS5 protein |
M. thermoresistible (build 8) | TH_0185 | mmpS5 | 2e-39 | 55.80% (138) | POSSIBLE CONSERVED MEMBRANE PROTEIN MMPS5 |
M. ulcerans Agy99 | MUL_0758 | mmpS5 | 4e-57 | 70.42% (142) | transmembrane proteinm, MmpS5 |
M. vanbaalenii PYR-1 | Mvan_3188 | - | 2e-74 | 94.37% (142) | hypothetical protein Mvan_3188 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3434|M.gilvum_PYR-GCK ---------------MIAIGKKVWLPLLIVVVVVIAGATVSRIRTFFGSE Mvan_3188|M.vanbaalenii_PYR-1 ---------------MIAIAKKVWLPLLIVVVVAIAGLTVARIRTFFGAE Mb0696c|M.bovis_AF2122/97 ---------------MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSE Rv0677c|M.tuberculosis_H37Rv ---------------MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSE MMAR_1006|M.marinum_M ---------------MIGILKRAWIPLLILVVVAIAGFTVQRIRTFFGAD MUL_0758|M.ulcerans_Agy99 ---------------MIGILKRAWIPLLILVVVAIAGFTVQRIRTFFGAD TH_0185|M.thermoresistible__bu ---------------MIKTLRRFWMPLLIAAVVAVGAFAVDRVRQIFAAE MAB_4383c|M.abscessus_ATCC_199 ---------------MIRVAKRVWLPMLVVAAVAIGSITVMHLRTNFGAT MAV_2511|M.avium_104 -------------MQISRLVRNAWLPLLIVAVVLVGGFAVVRVKSFFGAH MSMEG_3495|M.smegmatis_MC2_155 MMAVDTKDKQRKKFSISALARRFWIPLLIGAVVFVGAFTVMRVRTFFGSG MLBr_02377|M.leprae_Br4923 ----MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASE : . *:*::: ..: :.. .* ::: *.: Mflv_3434|M.gilvum_PYR-GCK GIIETPRNFADLPEPFDPKVVRYEIIGN-GSYADVNYLDLDAKPQRVDGA Mvan_3188|M.vanbaalenii_PYR-1 GIIETPRNFADLPEPFDPKVVRYEITGS-GSYADVNYLDLDAKPQRVDGA Mb0696c|M.bovis_AF2122/97 GILVTPKVFADDPEPFDPKVVEYEVSGS-GSYVNINYLDLDAKPQRIDGA Rv0677c|M.tuberculosis_H37Rv GILVTPKVFADDPEPFDPKVVEYEVSGS-GSYVNINYLDLDAKPQRIDGA MMAR_1006|M.marinum_M GILVTPKVFANDPEPYDPKVVKYEISGS-GSYANINYLDLDAKPQRIDGA MUL_0758|M.ulcerans_Agy99 GILVTPKVFANDPEPYDPKVVKYEISGS-GSYANINYLDLDAKPQRIDGA TH_0185|M.thermoresistible__bu SHIVTPIVFADDPEPFDPKVVTYEIFGTPGAVVDINYLDLDARTQRVNDV MAB_4383c|M.abscessus_ATCC_199 PFVVTPRN-SDTAERFNPKVVTYEVFGS-AATAVINYRDLNAIPQRVSEV MAV_2511|M.avium_104 DTGILTSPRLDDSKPFKPKVVKYEVFG-SASQANVNYLDLSADPKRVDGA MSMEG_3495|M.smegmatis_MC2_155 DDPSLASAKVDDTKPFDPKVVVYEIYGEPGATADINYLDLDAQPQRVDGA MLBr_02377|M.leprae_Br4923 KRESYADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGA . . .: :.** : **: * .: . :.* * .: .:*:. . Mflv_3434|M.gilvum_PYR-GCK ALPWSLTLETTEPSAAPNIVAQGDSSTITCRIFVDDELKDERTTDGLNAQ Mvan_3188|M.vanbaalenii_PYR-1 ALPWSLTLETTEPSAAPNIVAQGDGSTITCRIFVDDELKDERTTDGLNAQ Mb0696c|M.bovis_AF2122/97 ALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVKDERTATGVDAL Rv0677c|M.tuberculosis_H37Rv ALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVKDERTATGVDAL MMAR_1006|M.marinum_M SLPWSLTLQTTAPSAAPNILAQGNGSSISCRIIVDDVVKDERTATGVDAL MUL_0758|M.ulcerans_Agy99 SLPWSLTLQTTAPSAAPNILAQGNGSSISCRIIVDDVVKDERTATGVDAL TH_0185|M.thermoresistible__bu TLPWSITLSTTAPSALAHIVAQGNADHIGCRIIVDGELRVESVSTGVNAQ MAB_4383c|M.abscessus_ATCC_199 PLPWSLTLSTTLPSVMPTLFAQGDGQDIGCRITVDNDVKDERVVTGVNAE MAV_2511|M.avium_104 PLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKDENITHGVHAL MSMEG_3495|M.smegmatis_MC2_155 TLPWSLTLSTTAPSVFPNIVAQGNGDTITCRITVDDELKDERTSNGVNAQ MLBr_02377|M.leprae_Br4923 QLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAY ***:: : ** .:. : **.: : *** :*. :: * :.* Mflv_3434|M.gilvum_PYR-GCK TFCFVKSA Mvan_3188|M.vanbaalenii_PYR-1 TFCFVKSA Mb0696c|M.bovis_AF2122/97 TYCFVKSA Rv0677c|M.tuberculosis_H37Rv TYCFVKSA MMAR_1006|M.marinum_M TYCFVKSA MUL_0758|M.ulcerans_Agy99 TYCFVKSA TH_0185|M.thermoresistible__bu TYCIEKSA MAB_4383c|M.abscessus_ATCC_199 TYCLVKAA MAV_2511|M.avium_104 TFCLVKSA MSMEG_3495|M.smegmatis_MC2_155 TFCLVKSA MLBr_02377|M.leprae_Br4923 TYCLVKSA *:*: *:*