For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTKADPEWFYSVAGKLSEAATSFEARFTALDQKLNVSRSAGSYTTGGPRWSTSYDQSASDVFEVGSLGVM AATVLAKLVHEAGLNEAKAENESSPNGPQERTPTPPSGSKINHAMHPSKLSVGGDNSKPDHWSLIADYVK KEWADCDEERIRAAGTAFSSFGTESQKQATELWNACTAVFTDERQRGYPEISEMVTEIANVCGALKGEVA SDLGVACEAVGAKASEMKKLGQTSLTILHYIILSYEVDKVLARRLPWGDRIRKGIDRLIEFNKKEYAKAN DKLMKSIDQTVDQAAESNEGINNTATTDAKFLSNLLDRIPRQTDPIRNRTKEENEAAGDEGERRAGINPR GRKREVRVIVDTGSGPVAREVVPDRIDDVNRQVTEVKNTNEIRPDRVQILAEAEWARQNGYTMTLVVDHR TVINDPKIQEMVNNGQIQVVRKELDDAYF
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4465 | - | - | 100% (449) | hypothetical protein MAB_4465 |
| M. abscessus ATCC 19977 | MAB_4829c | - | 3e-10 | 27.59% (174) | hypothetical protein MAB_4829c |
| M. abscessus ATCC 19977 | MAB_3114 | - | 3e-05 | 23.50% (234) | hypothetical protein MAB_3114 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3933c | - | 5e-09 | 26.88% (160) | hypothetical protein Mb3933c |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv3903c | - | 6e-09 | 26.88% (160) | hypothetical protein Rv3903c |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_2415 | - | 2e-07 | 23.42% (222) | hypothetical protein MAV_2415 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3933c|M.bovis_AF2122/97 MAPLAVDPAALDSAGGAVVAAGAGLGAVISSLTAALAGCAGMAGDDPAGA
Rv3903c|M.tuberculosis_H37Rv MAPLAVDPAALDSAGGAVVAAGAGLGAVISSLTAALAGCAGMAGDDPAGA
MAV_2415|M.avium_104 MAPLAVDPEAMYAAGSAVAAIGDSLAANLTILTAGVS---AHTGVDRAGE
MAB_4465|M.abscessus_ATCC_1997 --MTKADPEWFYSVAGKLSEAATSFEARFTALDQKLNVSRSAGSYTTGGP
.** : :... : . .: * :: * : . . .*
Mb3933c|M.bovis_AF2122/97 VFGRSYDGSAAALVQAMSVARNGLCNLGDGVRMSAHNYSLAEAMSDVAGR
Rv3903c|M.tuberculosis_H37Rv VFGRSYDGSAAALVQAMSVARNGLCNLGDGVRMSAHNYSLAEAMSDVAGR
MAV_2415|M.avium_104 VFGLGYQDSAESMLKAAAGVVNACRKCGALIQQGASNYSAAEAASTLGGG
MAB_4465|M.abscessus_ATCC_1997 RWSTSYDQSASDVFEVGSLGVMAATVLAKLVHEAGLNEAKAENESSPNGP
:. .*: ** :.:. : . . :: .. * : ** * *
Mb3933c|M.bovis_AF2122/97 AAPLPAPPPSGCVGVGAPPS--AVGGGGGAPKGWGWVAPYIGMIWPNGDS
Rv3903c|M.tuberculosis_H37Rv AAPLPAPPPSGCVGVGAPPS--AVGGGGGAPKGWGWVAPYIGMIWPNGDS
MAV_2415|M.avium_104 SGALPAPSAPADLAAPGPPG--TWGKGEPPPLLWAVIQALVSEVWPDGDE
MAB_4465|M.abscessus_ATCC_1997 QERTPTPPSGSKINHAMHPSKLSVGGDNSKPDHWSLIADYVKKEWADCDE
*:*.. . : *. : * . * *. : : *.: *.
Mb3933c|M.bovis_AF2122/97 TKLRAAAVAWRSAGTQFALTEIQSTAGPMGVIRAQQLPEAGLIESAFADA
Rv3903c|M.tuberculosis_H37Rv TKLRAAAVAWRSAGTQFALTEIQSTAGPMGVIRAQQLPEAGLIESAFADA
MAV_2415|M.avium_104 AGLHAAASRWHGFAAAMNGVQGTLNAS-KALFDSQQIPEGEKIDHALAEI
MAB_4465|M.abscessus_ATCC_1997 ERIRAAGTAFSSFGTESQKQATELWNACTAVFTDERQ-------RGYPEI
::**. : . .: . .:: :: . .:
Mb3933c|M.bovis_AF2122/97 YASTTAVVGQCHQLAAQLDAYAARIDAVHAAVLDLLARICDPLTGIKEVW
Rv3903c|M.tuberculosis_H37Rv YASTTAVVGQCHQLAAQLDAYAARIDAVHAAVLDLLARICDPLTGIKEVW
MAV_2415|M.avium_104 GAAAAAIGQQCDALARTVDEFADRVGHAQQAIRDLLHRIEALGDIGHDIM
MAB_4465|M.abscessus_ATCC_1997 SEMVTEIANVCGALKG---EVASDLGVACEAVGAKASEMKKLGQTSLTIL
.: : * * * :. . *: .: :
Mb3933c|M.bovis_AF2122/97 EFLTDQDEDEIQRIAHDIAVVVDQFSGEVDALAAEITAVVSHAEAVITAM
Rv3903c|M.tuberculosis_H37Rv EFLTDQDEDEIQRIAHDIAVVVDQFSGEVDALAAEITAVVSHAEAVITAM
MAV_2415|M.avium_104 LIIDGDAWDEIQKIARDVNAVLQHLGQEARAFEQEIRLLMQAADREIVTC
MAB_4465|M.abscessus_ATCC_1997 HYII---------LSYEVDKVLARRLPWGDRIRKGIDRLIEFNKKEYAKA
: :: :: *: : : * ::. . .
Mb3933c|M.bovis_AF2122/97 ADHAGKQWDRFLHS---NPVGVVIDGTGQQLKGFGEEAFGMAKDSWDLGP
Rv3903c|M.tuberculosis_H37Rv ADHAGKQWDRFLHS---NPVGVVIDGTGQQLKGFGEEAFGMAKDSWDLGP
MAV_2415|M.avium_104 QKYARRGLITFLGEDVGNPVATALDFGINVQEGVVKGAVGMGLGLVDLSP
MAB_4465|M.abscessus_ATCC_1997 NDKLMK------------SIDQTVDQAAESNEGINNTAT-----------
. : .: .:* : :*. : *
Mb3933c|M.bovis_AF2122/97 LRASIDPFGWYRSWEEMLTGMAPLAGLGGENAPG-VVESWKQFGKSLIHW
Rv3903c|M.tuberculosis_H37Rv LRASIDPFGWYRSWEEMLTGMAPLAGLGGENAPG-VVESWKQFGKSLIHW
MAV_2415|M.avium_104 HWIALDPEGAGATWGGLVKNAWKESFVNAAVNPQEFAQARLQELKGLVHA
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 DEWTTN-PNEALGKTVFDAATLALP-------------------------
Rv3903c|M.tuberculosis_H37Rv DEWTTN-PNEALGKTVFDAATLALP-------------------------
MAV_2415|M.avium_104 DDWTRDRPGLGAGEVAFDAATLIAPGLGEAGAAADGASAAARGAEAEADA
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 -------------GGPLSKLGSKGRDILAGVRGLKERLEPTTP-------
Rv3903c|M.tuberculosis_H37Rv -------------GGPLSKLGSKGRDILAGVRGLKERLEPTTP-------
MAV_2415|M.avium_104 AGAAGRVGGIAGARGALTDIAKSTADLPKNLEGVTKDLPEIKPPTGGAPV
MAB_4465|M.abscessus_ATCC_1997 ---------------------TDAKFLSNLLDRIPRQTDPIRN-------
.. : : : .
Mb3933c|M.bovis_AF2122/97 ------------------------------------------------HL
Rv3903c|M.tuberculosis_H37Rv ------------------------------------------------HL
MAV_2415|M.avium_104 GLGPGGKPIEAPVESAPRPPDGTPGAQRGSPPVATSPASPGPAGDSGAGP
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 EPPATPPRPGPQPPRIEPPESGHPAPAPAAKP----------APVPANGP
Rv3903c|M.tuberculosis_H37Rv EPPATPPRPGPQPPRIEPPESGHPAPAPAAKP----------APVPANGP
MAV_2415|M.avium_104 HGPSSSPAPAAPPGGPVGPHDPAPAPAPAASPGGPGGSGGVHDPAPAPAP
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 LPHSPTESKPPPVDRPAEPVAPSSASAGQPRVSAATTPG-THVPHGLPQP
Rv3903c|M.tuberculosis_H37Rv LPHSPTESKPPPVDRPAEPVAPSSASAGQPRVSAATTPG-THVPHGLPQP
MAV_2415|M.avium_104 APAASGGPGDPASVPSGGPHEPASVPAEEPREPVSVPAGGVHDPVAEPTG
MAB_4465|M.abscessus_ATCC_1997 ----RTKEENEAAGDEGERRAGINPRGRKREVRVIVDTG------SGPVA
. . . . : . . . .* . *
Mb3933c|M.bovis_AF2122/97 GEHVPAQAPPATTLLG--------GPPVESAPATAHQPQWATTPAAPAAA
Rv3903c|M.tuberculosis_H37Rv GEHVPAQAPPATTLLG--------GPPVESAPATAHQPQWATTPAAPAAA
MAV_2415|M.avium_104 GPHEPASVPAAGSRLASVQAAAGDGLPSATPQLFDHTPSQVPVPAGGSSG
MAB_4465|M.abscessus_ATCC_1997 REVVPDRIDDVNRQVT------------EVKNTNEIRPDRVQILA---EA
* . : *. . * .
Mb3933c|M.bovis_AF2122/97 PHSTPGGVHSTESGPHGRSLSAHGSEPTHDGASHGSGHGSG-SEPPGLHA
Rv3903c|M.tuberculosis_H37Rv PHSTPGGVHSTESGPHGRSLSAHGSEPTHDGASHGSGHGSG-SEPPGLHA
MAV_2415|M.avium_104 EAASVGAHSPSSASSAAPHFESPGGRPSEVPAPNGGAHGPGESGPAGGHP
MAB_4465|M.abscessus_ATCC_1997 EWARQNGYTMTLVVDHRTVINDPKIQEMVN--------------------
: .. : :. .
Mb3933c|M.bovis_AF2122/97 PHREQQLAMHSNE---PAGEGWHRLSDEAVDPQYGEPLSRHWDFTDNPAD
Rv3903c|M.tuberculosis_H37Rv PHREQQLAMHSNE---PAGEGWHRLSDEAVDPQYGEPLSRHWDFTDNPAD
MAV_2415|M.avium_104 PGEPPHGGKPSGDGGPPDEDSHRDGTPGNGDDGAAGEIDDGPAGVDGQST
MAB_4465|M.abscessus_ATCC_1997 -------------------NGQIQVVRKELDDAYF---------------
:. *
Mb3933c|M.bovis_AF2122/97 RSRIN--------PVVAQLMEDPNAPFGRDPQG--QPYTQERYQERFN-S
Rv3903c|M.tuberculosis_H37Rv RSRIN--------PVVAQLMEDPNAPFGRDPQG--QPYTQERYQERFN-S
MAV_2415|M.avium_104 PAKVAGVDYPLPPSDALRVLEHPGAELQRLADGGVPSSILEGYEPLAGRS
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 VGPWGQQYSNFPPN-------NGAVPGTRIAYTNLEKFLSDYGPQLDRIG
Rv3903c|M.tuberculosis_H37Rv VGPWGQQYSNFPPN-------NGAVPGTRIAYTNLEKFLSDYGPQLDRIG
MAV_2415|M.avium_104 VDDFNREFTIETSNGERGWDWEAQAPENGFAGNPIESNHIPAGLHFDRIG
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 GDQGKYLAIMEHGRPASWEQRALHVTSLRDPYHAYTIDWLP-EGWFIEVS
Rv3903c|M.tuberculosis_H37Rv GDQGKYLAIMEHGRPASWEQRALHVTSLRDPYHAYTIDWLP-EGWFIEVS
MAV_2415|M.avium_104 PNGGGFLS--PEGVPLAERATPPGLAAQYHVFEGTGREIPAGKDWVVQHG
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 EVAPGCGQPGGSIQVRIFDHQN-EMRKVEELIRRGVLRQ-----------
Rv3903c|M.tuberculosis_H37Rv EVAPGCGQPGGSIQVRIFDHQN-EMRKVEELIRRGVLRQ-----------
MAV_2415|M.avium_104 PAKEAFGQPGGGDQWIVLDRATNRPVPVDELIRRRLLREITPPNDKLAIG
MAB_4465|M.abscessus_ATCC_1997 --------------------------------------------------
Mb3933c|M.bovis_AF2122/97 ----
Rv3903c|M.tuberculosis_H37Rv ----
MAV_2415|M.avium_104 YRGS
MAB_4465|M.abscessus_ATCC_1997 ----