For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RTDLCERFGIRYPIFGFTPSEKVAAAISRAGGMGVLGCVRFNDPDELDAVLNWMDENTDGKPYGVDIVMP AKVPAEGTAVDIDKLIPQGHKDFVEKTLADLGVPPLPGERESAGVLGWLHSVARSHVEVALKHPIKLIAN ALGSPPKDVIDQAHEHGVPVAALAGKAEHARRHVENGVDIVVAQGYEAGGHTGDVASMVLWPEIVDALDG SAPVLAAGGIGSGRQAAAALALGASGVWTGSIWLTAAEYDLGTVTAGGDSVVQQALLKATSGDTVRTRIY TGKPARLLKTKWTQAWDAEDAPTPLPMPLQNILVSEAHERMNRAHDPETVCFPAGQIVGRMNEIRPTAEI VADLVSGFEAAVDRLDEIRG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4162c | - | - | 100% (371) | putative 2-nitropropane dioxygenase |
M. abscessus ATCC 19977 | MAB_0354c | - | 2e-88 | 45.65% (379) | 2-nitropropane dioxygenase family oxidoreductase |
M. abscessus ATCC 19977 | MAB_0603c | - | 8e-26 | 30.64% (297) | 2-nitropropane dioxygenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1560 | - | 9e-92 | 47.40% (384) | hypothetical protein Mb1560 |
M. gilvum PYR-GCK | Mflv_1544 | - | 1e-171 | 78.71% (371) | 2-nitropropane dioxygenase, NPD |
M. tuberculosis H37Rv | Rv1533 | - | 9e-92 | 47.40% (384) | hypothetical protein Rv1533 |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_2787 | - | 1e-89 | 47.11% (380) | hypothetical protein MMAR_2787 |
M. avium 104 | MAV_2807 | - | 3e-93 | 48.28% (379) | oxidoreductase, 2-nitropropane dioxygenase family protein |
M. smegmatis MC2 155 | MSMEG_5913 | - | 1e-172 | 78.71% (371) | dioxygenase |
M. thermoresistible (build 8) | TH_1822 | - | 1e-167 | 76.55% (371) | dioxygenase |
M. ulcerans Agy99 | MUL_1143 | - | 1e-90 | 47.63% (380) | hypothetical protein MUL_1143 |
M. vanbaalenii PYR-1 | Mvan_5214 | - | 1e-169 | 77.63% (371) | 2-nitropropane dioxygenase, NPD |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1544|M.gilvum_PYR-GCK MRTELCDRFGIEYPIFVFTPSEKVAAAVTKAGGLGVLGCVRFNDADDLEN Mvan_5214|M.vanbaalenii_PYR-1 MKTELCDRFGIEYPLFVFTPSEKVAAAVSKAGGLGVLGCVRFNDADDLEN MSMEG_5913|M.smegmatis_MC2_155 MKTELCERFGIEYPIFVFTPSEKVAAAVSKAGGLGVLGCVRFNDADDLED TH_1822|M.thermoresistible__bu MRTELCERFGIRYPIFVFTPSEKVAAAVSRAGGLGVLGCVRFNDPDDLEN MAB_4162c|M.abscessus_ATCC_199 MRTDLCERFGIRYPIFGFTPSEKVAAAISRAGGMGVLGCVRFNDPDELDA MMAR_2787|M.marinum_M MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFT-PEQLEI MUL_1143|M.ulcerans_Agy99 MHTAICDELGIEFPIFAFTHCRDVVLAVSKAGGFGVLGAVGFT-PEQLEI MAV_2807|M.avium_104 MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFT-PEQLEI Mb1560|M.bovis_AF2122/97 MRTRVAELLGAEFPICAFSHCRDVVAAVSNAGGFGILGAVAHS-PKRLES Rv1533|M.tuberculosis_H37Rv MRTRVAELLGAEFPICAFSHCRDVVAAVSNAGGFGILGAVAHS-PKRLES *:* :.: :* .:*: *: ...*. *::.***:*:**.* .. .. *: Mflv_1544|M.gilvum_PYR-GCK VLQWMDANTDGKPYGVDIVMP-------AKVPTEG---TSVDINKLIPAE Mvan_5214|M.vanbaalenii_PYR-1 VLQWMDANTDGKPYGVDIVMP-------AKVPTEG---TSVDINKLIPAE MSMEG_5913|M.smegmatis_MC2_155 VLQWMDANTDGKPYGVDVVMP-------AKVPTEG---TAVDINKLIPQG TH_1822|M.thermoresistible__bu VLCWMDDNTDGLPYGVDVVMP-------AKVPTEG---SAVDIDKLIPQG MAB_4162c|M.abscessus_ATCC_199 VLNWMDENTDGKPYGVDIVMP-------AKVPAEG---TAVDIDKLIPQG MMAR_2787|M.marinum_M ELTWIDEHIGDHPYGVDIVIPNKYEGMDSHLSAEE---LANTLRSMVPQQ MUL_1143|M.ulcerans_Agy99 ELNWIDEHIGDHPYGVDIVIPNKYEGMDSHLSAEE---LANTLRSMVPQQ MAV_2807|M.avium_104 ELKWIDENIGDHPYGVDIVIPNKYEGMDSHLSAEE---LAETLRKMVPQE Mb1560|M.bovis_AF2122/97 ELTWIEEHTGGKPYGVDVLLP------PKYIGAEQGGIDAQQARELIPEG Rv1533|M.tuberculosis_H37Rv ELTWIEEHTGGKPYGVDVLLP------PKYIGAEQGGIDAQQARELIPEG * *:: : .. *****:::* : :* : .::* Mflv_1544|M.gilvum_PYR-GCK HREFVDKTLADLGVPPLPEDEER-SEGVLGWLHSVARSHVEVALKHP-IK Mvan_5214|M.vanbaalenii_PYR-1 HREFVDKTLADLGVPPLPADEER-SEGVLGWLHSVARSHVEVALKHP-IK MSMEG_5913|M.smegmatis_MC2_155 HRDFVAKTLADLGVPPLPEDGER-NEGVLGWLHSVARSHVEVALKHP-IK TH_1822|M.thermoresistible__bu HRDFVNKTLTELGVPPLSEDQQR-NEGVLGWLHSVARSHVDVALKHP-IK MAB_4162c|M.abscessus_ATCC_199 HKDFVEKTLADLGVPPLPGERE--SAGVLGWLHSVARSHVEVALKHP-IK MMAR_2787|M.marinum_M HLDFARKILADHGVP-IEDADED-SLQLLGWTEATATPQVEVALEHSKVT MUL_1143|M.ulcerans_Agy99 HLDFARKILADHGVP-IEDADED-SLQLLGWTEATATPQVEVALKHSKVT MAV_2807|M.avium_104 HLDFGKKILADHGVP-IEDSDSD-SLQLLGWTEATATPQVEVALKHPKVK Mb1560|M.bovis_AF2122/97 HRTFVDDLLVRYGIPAVTDRQRSSSAGGLHISPKGYQPLLDVAFAHD-IR Rv1533|M.tuberculosis_H37Rv HRTFVDDLLVRYGIPAVTDRQRSSSAGGLHISPKGYQPLLDVAFAHD-IR * * . *. *:* : . * . ::**: * : Mflv_1544|M.gilvum_PYR-GCK LIANALGSPPKDVIDQVHEAGVPVAALAGSPKHALRHVENGVDIVVAQGH Mvan_5214|M.vanbaalenii_PYR-1 LIANALGSPPKDVIDQAHQAGVPVAALAGSAKHALRHVDNGVDIVVAQGH MSMEG_5913|M.smegmatis_MC2_155 LIANALGSPPKDVIDQAHAAGVPVAALAGSAKHALRHVENGVDIVVAQGH TH_1822|M.thermoresistible__bu LIANALGSPPTDVIERVHKAGVPVAALAGSAKHAQRHVDNGVDIVVAQGH MAB_4162c|M.abscessus_ATCC_199 LIANALGSPPKDVIDQAHEHGVPVAALAGKAEHARRHVENGVDIVVAQGY MMAR_2787|M.marinum_M MIANALGTPPAEMIAHIHEQGRKVAALCGSPSQARKHANAGVDIIIAQGG MUL_1143|M.ulcerans_Agy99 MIANALGTPPAEMIAHIHERGRKVAALCGSPSQARKHANAGVDIIIAQGG MAV_2807|M.avium_104 MIANALGTPPADMIKHIHDAGLKVAALCGSPSQARKHADAGVDIIIAQGG Mb1560|M.bovis_AF2122/97 LIASALGPPPPDLVERAHNHDVLVAALAGTAQHARRHAAAGVDLIVAQGT Rv1533|M.tuberculosis_H37Rv LIASALGPPPPDLVERAHNHDVLVAALAGTAQHARRHAAAGVDLIVAQGT :**.***.** ::: : * . ****.*...:* :*. ***:::*** Mflv_1544|M.gilvum_PYR-GCK EAGGHTGEIGSMVLWPEIVDALDGRAPVLAAGGIGTGRQVAAALALGAQG Mvan_5214|M.vanbaalenii_PYR-1 EAGGHTGEIGSMVLWPEIVDAIEGRAPVLAAGGIGTGRQVAAALALGAQG MSMEG_5913|M.smegmatis_MC2_155 EAGGHTGEIGSMVLWPEIVDALDGKAPVLAAGGIGTGRQVAAALALGASG TH_1822|M.thermoresistible__bu EAGGHTGEIGSVVLWPEIVDAVGDQVPVLAAGGIGTGRQVAAALALGAQG MAB_4162c|M.abscessus_ATCC_199 EAGGHTGDVASMVLWPEIVDALDGSAPVLAAGGIGSGRQAAAALALGASG MMAR_2787|M.marinum_M EAGGHCGEVGSIVLWPQVVKEVAP-VPVLAAGGIGSGQQIAAALVLGCQG MUL_1143|M.ulcerans_Agy99 EAGGHCGEVGSIVLWPQVVKEVAP-VPVLAAGGIGSGQQIAAALALGCQG MAV_2807|M.avium_104 EAGGHCGEVGSIVLWPQVVKEVAP-LPVLAAGGIGSGQQIAAALALGAQG Mb1560|M.bovis_AF2122/97 EAGGHTGEVATMVLVPEVVDAVSP-TPVLAAGGIARGRQIAAALALGAEG Rv1533|M.tuberculosis_H37Rv EAGGHTGEVATMVLVPEVVDAVSP-TPVLAAGGIARGRQIAAALALGAEG ***** *::.::** *::*. : ********. *:* ****.**..* Mflv_1544|M.gilvum_PYR-GCK VWMGSAFLTSAEYDLGVRLESGRSVIQEAMLKATSADTVRRRIYTGKPAR Mvan_5214|M.vanbaalenii_PYR-1 VWMGSAFLTSAEYDLGVRLPSGRSVVQEAMLNATSADTVRRRIYTGKPAR MSMEG_5913|M.smegmatis_MC2_155 VWMGSAFLTSAEYDLGHRKPSGVSTIQEALLRAGTADTVRRKIYTGKPAR TH_1822|M.thermoresistible__bu VWMGSAFLTSAEYDLGVRRESGISTIQQALLDATSADTVRRRIYTGKPAR MAB_4162c|M.abscessus_ATCC_199 VWTGSIWLTAAEYDLGTVTAGGDSVVQQALLKATSGDTVRTRIYTGKPAR MMAR_2787|M.marinum_M AWTGSQWLMVEE-------ASNTPVQQAAYAKASSRDTVRSRSFTGKPAR MUL_1143|M.ulcerans_Agy99 AWTGSQWLMVEE-------ASNTPVQQAAYAKASSRDTVRSRSFTGKPAR MAV_2807|M.avium_104 AWTGSQWLMVEE-------SSNTPVQQAAYAKAGSRDTVRSRSFTGKPAR Mb1560|M.bovis_AF2122/97 VWCGSVWLTTEE-------AETPPVVKDKFLAATSSDTVRSRSLTGKPAR Rv1533|M.tuberculosis_H37Rv VWCGSVWLTTEE-------AETPPVVKDKFLAATSSDTVRSRSLTGKPAR .* ** :* * .. : * : **** : ****** Mflv_1544|M.gilvum_PYR-GCK LLKSRWTDAWDAEGAPEPLPMPLQNILVSEAHQRMSES-----SDPTTVA Mvan_5214|M.vanbaalenii_PYR-1 LLKSRWTDAWDADGAPEPLPMPLQNILVSEAHQRMSEN-----SDPTAVA MSMEG_5913|M.smegmatis_MC2_155 LLKTKWTDAWDAPEAPEPLPMPLQNILVSEAHQRMNES-----DNPDTVA TH_1822|M.thermoresistible__bu LLKSRWTDAWDAPDAPEPLPMPLQNILVSEAHQRMNYS-----TDPTTVA MAB_4162c|M.abscessus_ATCC_199 LLKTKWTQAWDAEDAPTPLPMPLQNILVSEAHERMNRA-----HDPETVC MMAR_2787|M.marinum_M MLRNDWTEAWEQADNPKPLGMPLQYMVSGMAVRATNKHP----NETVDVA MUL_1143|M.ulcerans_Agy99 MLRNDWTEAWEQADNPKPLGMPLQYMVSGMAVRATNKYP----NETVDVA MAV_2807|M.avium_104 MLRNDWTEAWEAPGNPKPLGMPLQYMVSGMAVRATNKYP----NESVDVA Mb1560|M.bovis_AF2122/97 MLRTAWTDEWDRPDSPDPLGMPLQSALVSDPQLRINQAAGQPGAKARELA Rv1533|M.tuberculosis_H37Rv MLRTAWTDEWDRPDSPDPLGMPLQSALVSDPQLRINQAAGQPGAKARELA :*:. **: *: * ** **** : . . . .. :. Mflv_1544|M.gilvum_PYR-GCK M-PVGQIVGRMNEIRPVADIIAELVSGFDEASKRLDAIRDN--- Mvan_5214|M.vanbaalenii_PYR-1 M-PVGQIVGRMNEIRPVADIIAELVSGFEEATRRLDAIRDN--- MSMEG_5913|M.smegmatis_MC2_155 M-PVGQIVGRMNQIRPVADIIAELVEGFEKATNRLDTVRDA--- TH_1822|M.thermoresistible__bu M-PVGQIVGRMNEIRPVGDIIADLVAEFEEATRRLDTIRDG--- MAB_4162c|M.abscessus_ATCC_199 F-PAGQIVGRMNEIRPTAEIVADLVSGFEAAVDRLDEIRG---- MMAR_2787|M.marinum_M FNPVGQVVGQFTKVEKAATVIERWVQEYLEATNRLDELNAAAV- MUL_1143|M.ulcerans_Agy99 FNPVGQVVGQFTKVEKAATVIERWVQEYLEATNRLDELNAAAV- MAV_2807|M.avium_104 FNPVGQVVGQFTKVEKTATVIERWVQEYLEATNRLDELNEAASV Mb1560|M.bovis_AF2122/97 TYFVGQVVGSLDRVRSARSVVLDMVEEFIDTVGQLQGLVQR--- Rv1533|M.tuberculosis_H37Rv TYFVGQVVGSLDRVRSARSVVLDMVEEFIDTVGQLQGLVQR--- .**:** : .:. . :: * : : :*: :