For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRTELCDRFGIEYPIFVFTPSEKVAAAVTKAGGLGVLGCVRFNDADDLENVLQWMDANTDGKPYGVDIVM PAKVPTEGTSVDINKLIPAEHREFVDKTLADLGVPPLPEDEERSEGVLGWLHSVARSHVEVALKHPIKLI ANALGSPPKDVIDQVHEAGVPVAALAGSPKHALRHVENGVDIVVAQGHEAGGHTGEIGSMVLWPEIVDAL DGRAPVLAAGGIGTGRQVAAALALGAQGVWMGSAFLTSAEYDLGVRLESGRSVIQEAMLKATSADTVRRR IYTGKPARLLKSRWTDAWDAEGAPEPLPMPLQNILVSEAHQRMSESSDPTTVAMPVGQIVGRMNEIRPVA DIIAELVSGFDEASKRLDAIRDN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1544 | - | - | 100% (373) | 2-nitropropane dioxygenase, NPD |
M. gilvum PYR-GCK | Mflv_3286 | - | 4e-90 | 46.75% (385) | 2-nitropropane dioxygenase, NPD |
M. gilvum PYR-GCK | Mflv_0037 | - | 5e-74 | 40.79% (380) | 2-nitropropane dioxygenase, NPD |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1927c | - | 9e-90 | 46.34% (382) | hypothetical protein Mb1927c |
M. tuberculosis H37Rv | Rv1894c | - | 9e-90 | 46.34% (382) | hypothetical protein Rv1894c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4162c | - | 1e-171 | 78.71% (371) | putative 2-nitropropane dioxygenase |
M. marinum M | MMAR_2787 | - | 2e-86 | 46.32% (380) | hypothetical protein MMAR_2787 |
M. avium 104 | MAV_2807 | - | 3e-93 | 48.44% (384) | oxidoreductase, 2-nitropropane dioxygenase family protein |
M. smegmatis MC2 155 | MSMEG_5913 | - | 0.0 | 88.44% (372) | dioxygenase |
M. thermoresistible (build 8) | TH_1822 | - | 0.0 | 85.22% (372) | dioxygenase |
M. ulcerans Agy99 | MUL_1143 | - | 2e-87 | 46.84% (380) | hypothetical protein MUL_1143 |
M. vanbaalenii PYR-1 | Mvan_5214 | - | 0.0 | 94.91% (373) | 2-nitropropane dioxygenase, NPD |
CLUSTAL 2.0.9 multiple sequence alignment Mb1927c|M.bovis_AF2122/97 MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFT-PEQLEI Rv1894c|M.tuberculosis_H37Rv MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFT-PEQLEI MMAR_2787|M.marinum_M MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFT-PEQLEI MUL_1143|M.ulcerans_Agy99 MHTAICDELGIEFPIFAFTHCRDVVLAVSKAGGFGVLGAVGFT-PEQLEI MAV_2807|M.avium_104 MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFT-PEQLEI Mflv_1544|M.gilvum_PYR-GCK MRTELCDRFGIEYPIFVFTPSEKVAAAVTKAGGLGVLGCVRFNDADDLEN Mvan_5214|M.vanbaalenii_PYR-1 MKTELCDRFGIEYPLFVFTPSEKVAAAVSKAGGLGVLGCVRFNDADDLEN MSMEG_5913|M.smegmatis_MC2_155 MKTELCERFGIEYPIFVFTPSEKVAAAVSKAGGLGVLGCVRFNDADDLED TH_1822|M.thermoresistible__bu MRTELCERFGIRYPIFVFTPSEKVAAAVSRAGGLGVLGCVRFNDPDDLEN MAB_4162c|M.abscessus_ATCC_199 MRTDLCERFGIRYPIFGFTPSEKVAAAISRAGGMGVLGCVRFNDPDELDA *:* :*:.:**.:*:* ** ...*. *:::***:****.* *. .::*: Mb1927c|M.bovis_AF2122/97 ELNWIDEHIGDHPYGVDIVIPNKYEGMDSQLSADELAKTLRSMVPQEHLD Rv1894c|M.tuberculosis_H37Rv ELNWIDEHIGDHPYGVDIVIPNKYEGMDSQLSADELAKTLRSMVPQEHLD MMAR_2787|M.marinum_M ELTWIDEHIGDHPYGVDIVIPNKYEGMDSHLSAEELANTLRSMVPQQHLD MUL_1143|M.ulcerans_Agy99 ELNWIDEHIGDHPYGVDIVIPNKYEGMDSHLSAEELANTLRSMVPQQHLD MAV_2807|M.avium_104 ELKWIDENIGDHPYGVDIVIPNKYEGMDSHLSAEELAETLRKMVPQEHLD Mflv_1544|M.gilvum_PYR-GCK VLQWMDANTDGKPYGVDIVMP-------AKVPTEGTSVDINKLIPAEHRE Mvan_5214|M.vanbaalenii_PYR-1 VLQWMDANTDGKPYGVDIVMP-------AKVPTEGTSVDINKLIPAEHRE MSMEG_5913|M.smegmatis_MC2_155 VLQWMDANTDGKPYGVDVVMP-------AKVPTEGTAVDINKLIPQGHRD TH_1822|M.thermoresistible__bu VLCWMDDNTDGLPYGVDVVMP-------AKVPTEGSAVDIDKLIPQGHRD MAB_4162c|M.abscessus_ATCC_199 VLNWMDENTDGKPYGVDIVMP-------AKVPAEGTAVDIDKLIPQGHKD * *:* : .. *****:*:* :::.:: : : .::* * : Mb1927c|M.bovis_AF2122/97 FARKILADHGVP-VEDADEDSLQLLGWTEATATPQVDAALKHPKMTMVAN Rv1894c|M.tuberculosis_H37Rv FARKILADHGVP-VEDADEDSLQLLGWTEATATPQVDAALKHPKMTMVAN MMAR_2787|M.marinum_M FARKILADHGVP-IEDADEDSLQLLGWTEATATPQVEVALEHSKVTMIAN MUL_1143|M.ulcerans_Agy99 FARKILADHGVP-IEDADEDSLQLLGWTEATATPQVEVALKHSKVTMIAN MAV_2807|M.avium_104 FGKKILADHGVP-IEDSDSDSLQLLGWTEATATPQVEVALKHPKVKMIAN Mflv_1544|M.gilvum_PYR-GCK FVDKTLADLGVPPLPEDEERSEGVLGWLHSVARSHVEVALKHP-IKLIAN Mvan_5214|M.vanbaalenii_PYR-1 FVDKTLADLGVPPLPADEERSEGVLGWLHSVARSHVEVALKHP-IKLIAN MSMEG_5913|M.smegmatis_MC2_155 FVAKTLADLGVPPLPEDGERNEGVLGWLHSVARSHVEVALKHP-IKLIAN TH_1822|M.thermoresistible__bu FVNKTLTELGVPPLSEDQQRNEGVLGWLHSVARSHVDVALKHP-IKLIAN MAB_4162c|M.abscessus_ATCC_199 FVEKTLADLGVPPLPGERE-SAGVLGWLHSVARSHVEVALKHP-IKLIAN * * *:: *** : . . :*** .:.* .:*:.**:*. :.::** Mb1927c|M.bovis_AF2122/97 ALGTPPADMIKHIHDSGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGG Rv1894c|M.tuberculosis_H37Rv ALGTPPADMIKHIHDSGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGG MMAR_2787|M.marinum_M ALGTPPAEMIAHIHEQGRKVAALCGSPSQARKHANAGVDIIIAQGGEAGG MUL_1143|M.ulcerans_Agy99 ALGTPPAEMIAHIHERGRKVAALCGSPSQARKHANAGVDIIIAQGGEAGG MAV_2807|M.avium_104 ALGTPPADMIKHIHDAGLKVAALCGSPSQARKHADAGVDIIIAQGGEAGG Mflv_1544|M.gilvum_PYR-GCK ALGSPPKDVIDQVHEAGVPVAALAGSPKHALRHVENGVDIVVAQGHEAGG Mvan_5214|M.vanbaalenii_PYR-1 ALGSPPKDVIDQAHQAGVPVAALAGSAKHALRHVDNGVDIVVAQGHEAGG MSMEG_5913|M.smegmatis_MC2_155 ALGSPPKDVIDQAHAAGVPVAALAGSAKHALRHVENGVDIVVAQGHEAGG TH_1822|M.thermoresistible__bu ALGSPPTDVIERVHKAGVPVAALAGSAKHAQRHVDNGVDIVVAQGHEAGG MAB_4162c|M.abscessus_ATCC_199 ALGSPPKDVIDQAHEHGVPVAALAGKAEHARRHVENGVDIVVAQGYEAGG ***:** ::* : * * ****.*...:* :*.: ****::*** **** Mb1927c|M.bovis_AF2122/97 HCGEVGSIVLWPQVVKEVAP-VPVLAAGGIGSGQQIAAALALGTQGAWTG Rv1894c|M.tuberculosis_H37Rv HCGEVGSIVLWPQVVKEVAP-VPVLAAGGIGSGQQIAAALALGTQGAWTG MMAR_2787|M.marinum_M HCGEVGSIVLWPQVVKEVAP-VPVLAAGGIGSGQQIAAALVLGCQGAWTG MUL_1143|M.ulcerans_Agy99 HCGEVGSIVLWPQVVKEVAP-VPVLAAGGIGSGQQIAAALALGCQGAWTG MAV_2807|M.avium_104 HCGEVGSIVLWPQVVKEVAP-LPVLAAGGIGSGQQIAAALALGAQGAWTG Mflv_1544|M.gilvum_PYR-GCK HTGEIGSMVLWPEIVDALDGRAPVLAAGGIGTGRQVAAALALGAQGVWMG Mvan_5214|M.vanbaalenii_PYR-1 HTGEIGSMVLWPEIVDAIEGRAPVLAAGGIGTGRQVAAALALGAQGVWMG MSMEG_5913|M.smegmatis_MC2_155 HTGEIGSMVLWPEIVDALDGKAPVLAAGGIGTGRQVAAALALGASGVWMG TH_1822|M.thermoresistible__bu HTGEIGSVVLWPEIVDAVGDQVPVLAAGGIGTGRQVAAALALGAQGVWMG MAB_4162c|M.abscessus_ATCC_199 HTGDVASMVLWPEIVDALDGSAPVLAAGGIGSGRQAAAALALGASGVWTG * *::.*:****::*. : *********:*:* ****.** .*.* * Mb1927c|M.bovis_AF2122/97 SQWLMVEE-------AANTAVQQAAYVKATSRDTVRSRSFTGKPARMLRN Rv1894c|M.tuberculosis_H37Rv SQWLMVEE-------AANTAVQQAAYVKATSRDTVRSRSFTGKPARMLRN MMAR_2787|M.marinum_M SQWLMVEE-------ASNTPVQQAAYAKASSRDTVRSRSFTGKPARMLRN MUL_1143|M.ulcerans_Agy99 SQWLMVEE-------ASNTPVQQAAYAKASSRDTVRSRSFTGKPARMLRN MAV_2807|M.avium_104 SQWLMVEE-------SSNTPVQQAAYAKAGSRDTVRSRSFTGKPARMLRN Mflv_1544|M.gilvum_PYR-GCK SAFLTSAEYDLGVRLESGRSVIQEAMLKATSADTVRRRIYTGKPARLLKS Mvan_5214|M.vanbaalenii_PYR-1 SAFLTSAEYDLGVRLPSGRSVVQEAMLNATSADTVRRRIYTGKPARLLKS MSMEG_5913|M.smegmatis_MC2_155 SAFLTSAEYDLGHRKPSGVSTIQEALLRAGTADTVRRKIYTGKPARLLKT TH_1822|M.thermoresistible__bu SAFLTSAEYDLGVRRESGISTIQQALLDATSADTVRRRIYTGKPARLLKS MAB_4162c|M.abscessus_ATCC_199 SIWLTAAEYDLGTVTAGGDSVVQQALLKATSGDTVRTRIYTGKPARLLKT * :* * .. .. * * * : **** : :******:*:. Mb1927c|M.bovis_AF2122/97 DWTEAWEQPESPKPLGMPLQYMVSGMAVKATHKYPNETVDVAFNPVGQVV Rv1894c|M.tuberculosis_H37Rv DWTEAWEQPESPKPLGMPLQYMVSGMAVKATHKYPNETVDVAFNPVGQVV MMAR_2787|M.marinum_M DWTEAWEQADNPKPLGMPLQYMVSGMAVRATNKHPNETVDVAFNPVGQVV MUL_1143|M.ulcerans_Agy99 DWTEAWEQADNPKPLGMPLQYMVSGMAVRATNKYPNETVDVAFNPVGQVV MAV_2807|M.avium_104 DWTEAWEAPGNPKPLGMPLQYMVSGMAVRATNKYPNESVDVAFNPVGQVV Mflv_1544|M.gilvum_PYR-GCK RWTDAWDAEGAPEPLPMPLQNILVSEAHQRMSES-SDPTTVAM-PVGQIV Mvan_5214|M.vanbaalenii_PYR-1 RWTDAWDADGAPEPLPMPLQNILVSEAHQRMSEN-SDPTAVAM-PVGQIV MSMEG_5913|M.smegmatis_MC2_155 KWTDAWDAPEAPEPLPMPLQNILVSEAHQRMNES-DNPDTVAM-PVGQIV TH_1822|M.thermoresistible__bu RWTDAWDAPDAPEPLPMPLQNILVSEAHQRMNYS-TDPTTVAM-PVGQIV MAB_4162c|M.abscessus_ATCC_199 KWTQAWDAEDAPTPLPMPLQNILVSEAHERMNRA-HDPETVCF-PAGQIV **:**: * ** **** :: . * . :. *.: *.**:* Mb1927c|M.bovis_AF2122/97 GQFTKVEKTATVIERWVQEYLEATARLDALNAAASV Rv1894c|M.tuberculosis_H37Rv GQFTKVEKTATVIERWVQEYLEATARLDALNAAASV MMAR_2787|M.marinum_M GQFTKVEKAATVIERWVQEYLEATNRLDELNAAAV- MUL_1143|M.ulcerans_Agy99 GQFTKVEKAATVIERWVQEYLEATNRLDELNAAAV- MAV_2807|M.avium_104 GQFTKVEKTATVIERWVQEYLEATNRLDELNEAASV Mflv_1544|M.gilvum_PYR-GCK GRMNEIRPVADIIAELVSGFDEASKRLDAIRDN--- Mvan_5214|M.vanbaalenii_PYR-1 GRMNEIRPVADIIAELVSGFEEATRRLDAIRDN--- MSMEG_5913|M.smegmatis_MC2_155 GRMNQIRPVADIIAELVEGFEKATNRLDTVRDA--- TH_1822|M.thermoresistible__bu GRMNEIRPVGDIIADLVAEFEEATRRLDTIRDG--- MAB_4162c|M.abscessus_ATCC_199 GRMNEIRPTAEIVADLVSGFEAAVDRLDEIRG---- *::.::. .. :: * : * *** :.