For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4020c (-)

annotation: oxidoreductase
coordinates: 4064511 - 4065638
length: 375

THALPMATQTGRHPLAWGMRVLDVVGPTAVAALGKTLPAVLRLSPLLGPVRPPKWVDRSLHLTVRERSVV
AADQDVVALSLGAHDGGELPRWRPGAHLDVTLPSGAVRQYSLCGDPRDRFSYRIAVRRIPNGNGGSIELH
DGVSVGDVLGVKGPRNAFPLATTGHLNTGTRRFHFVAGGIGITPILPMLAVATELGLPWTMTYTGRSRES
IPFRDELARYGDRITIRTDDEDGLPTPADLLPPLHPDLAVYCCGPAPMLNVVRDAVAECDGAELHFERFS
APPIEHGVPFQVQLGIGGPVLEVGADQSALAAVLTSRPGTPHSCRQGFCGTCKVKVLAGRPDHRDSLLTE
TQRAEGQMLLCVSRADGERLVLDI*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4020c--100% (375)oxidoreductase
M. abscessus ATCC 19977MAB_0088c-e-11258.12% (351) putative oxidoreductase
M. abscessus ATCC 19977MAB_2381-1e-5640.50% (321) oxidoreductase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2798c-5e-7649.06% (320) oxidoreductase
M. gilvum PYR-GCKMflv_3426-1e-10255.46% (339) ferredoxin
M. tuberculosis H37RvRv2776c-6e-7649.06% (320) oxidoreductase
M. leprae Br4923-----
M. marinum MMMAR_1933-6e-8050.94% (320) oxidoreductase
M. avium 104MAV_3669-2e-8348.66% (374) oxidoreductase
M. smegmatis MC2 155MSMEG_3676-1e-10055.79% (328) phenoxybenzoate dioxygenase beta subunit
M. thermoresistible (build 8)TH_3804-1e-10556.47% (340) PUTATIVE ferredoxin
M. ulcerans Agy99MUL_2159-2e-7750.00% (320) oxidoreductase
M. vanbaalenii PYR-1Mvan_3180-9e-9954.26% (352) ferredoxin

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_3676|M.smegmatis_MC2_155      ---------MLSQYRQLPPSTNGRFRHDP---MLAMAQIAIKTMWGVTRH
TH_3804|M.thermoresistible__bu      -------MRMLARLRATPPSSSGRIRHDL---LLGVADATISSLWKVSEV
Mflv_3426|M.gilvum_PYR-GCK          ------------------MGVLGRLRYDV---TIGLADAALHGMFATSAA
Mvan_3180|M.vanbaalenii_PYR-1       ------MTRLFSQFRQTPPSPSGRLRHDV---MLGIAETAIAGMFAASAA
MAB_4020c|M.abscessus_ATCC_199      ---MTHALPMATQTGRHPLAWGMRVLDVVGPTAVAALGKTLPAVLRLSPL
Mb2798c|M.bovis_AF2122/97           --------------------------------------------------
Rv2776c|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_1933|M.marinum_M               ------MAVSESSWTSRPADLYGRSHRDRFATALWGVRTMFGGFARFSRW
MUL_2159|M.ulcerans_Agy99           ------MAVSESSWTSRPADLYGRSHRDRFATALWGVRTMFGGFARFSRW
MAV_3669|M.avium_104                MSIRRAASRAPSIWASRPADLYGRRDHDRFTAVLWGVRAVFEGFASVSRW
                                                                                      

MSMEG_3676|M.smegmatis_MC2_155      IRRPSPPPALDRTIGLRVVDRRVVAHDQDVIALTLAADDGGALPRWYPGA
TH_3804|M.thermoresistible__bu      LRTPRLPAVDAEPITLTVRDRRVVAHDQDVIALTLVAADGGQLPPWRPGA
Mflv_3426|M.gilvum_PYR-GCK          MRRIRPPDGVPETFPLTVTSRRVVARDQDVVELTLSGDD---LPRWHPGA
Mvan_3180|M.vanbaalenii_PYR-1       VRRVRMPAAGPDTIPLTVTGRRVVAHDQDVVELTLAGDR---LPRWFPGA
MAB_4020c|M.abscessus_ATCC_199      LGPVRPPKWVDRSLHLTVRERSVVAADQDVVALSLGAHDGGELPRWRPGA
Mb2798c|M.bovis_AF2122/97           ---------MRRTNPAVVTKRELVAP--DVVALTLADPGGGLLPAWSPGG
Rv2776c|M.tuberculosis_H37Rv        ---------MRRTNPAVVTKRELVAP--DVVALTLADPGGGLLPAWSPGG
MMAR_1933|M.marinum_M               NPSRVTP--VGRTHRARVVERELVAP--DVVALTLADPDGGLLPSWSPGG
MUL_2159|M.ulcerans_Agy99           NPSRVTP--VGRTHRARVVERELVAP--DVVALTLADPDGGLLPSWSPGG
MAV_3669|M.avium_104                HPARVKP--VQRKLTAVVTKREFAAP--DVVALTLADPDGGLLPSWTPGA
                                                     *  * ..*   **: *:*       ** * **.

MSMEG_3676|M.smegmatis_MC2_155      HIDLHLPSGRIRQYSLCGDPAAG-TYRIAVRRIPEGGGGSVEIHDTVHIG
TH_3804|M.thermoresistible__bu      HIDVTLPSGRVRQYSLCGDPAVRDRYRIAVRRIPDGGGGSVEVHDALHLG
Mflv_3426|M.gilvum_PYR-GCK          HLDLHLPSGRIRQYSLCGEPTAG-HYRVAVRRIPDGGGGSVEVHDALPVG
Mvan_3180|M.vanbaalenii_PYR-1       HLDVHLPSGRVRQYSLCGDPDSA-EYRIAVRRIPDGGGGSVEVHDALEIG
MAB_4020c|M.abscessus_ATCC_199      HLDVTLPSGAVRQYSLCGDPRDRFSYRIAVRRIPNGNGGSIELHDGVSVG
Mb2798c|M.bovis_AF2122/97           HIDVQLPSGRRRQYSLCGVPGRRTDYRIAIRRIADGGGGSIEMHEAFDVG
Rv2776c|M.tuberculosis_H37Rv        HIDVQLPSGRRRQYSLCGVPGRRTDYRIAIRRIADGGGGSIEMHEAFDVG
MMAR_1933|M.marinum_M               HIDVQLPSGRRRQYSLCGPPGRRTDYRIAVRRIADGGGGSIEMHAAYQPG
MUL_2159|M.ulcerans_Agy99           HIDVQLPSRRRRQYSLCGPPGRRTDYRIAVRRIADGGGGSIEMHAAYQPG
MAV_3669|M.avium_104                HIDVLLPSGRRRQYSLCGPPGHRGEYRIAVRRIADGGGGSIEMHEAFGVG
                                    *:*: ***   ******* *     **:*:***.:*.***:*:*     *

MSMEG_3676|M.smegmatis_MC2_155      SRLTTHGPRNAFPLTVPGYG-SPTQRFRFIAGGIGITPILPMLDLAQRLG
TH_3804|M.thermoresistible__bu      ARVTTHGPRNAFPLSVPGYG-SPARRLRFIAGGIGITPILPMLAEAQAFG
Mflv_3426|M.gilvum_PYR-GCK          STVRTHGPRNAFPLAVPGYG-SPARRFRFIAGGIGITPILPMLALARSLG
Mvan_3180|M.vanbaalenii_PYR-1       STVHTHGPRNAFPLTVPGYG-SPARRFRFIAGGIGITPILPMLGLARRLG
MAB_4020c|M.abscessus_ATCC_199      DVLGVKGPRNAFPLATTGHLNTGTRRFHFVAGGIGITPILPMLAVATELG
Mb2798c|M.bovis_AF2122/97           DTCEFEGPRNAFHLGLAERD------VLFVIGGIGVTPILPMIRAAEQRG
Rv2776c|M.tuberculosis_H37Rv        DTCEFEGPRNAFHLGLAERD------VLFVIGGIGVTPILPMIRAAEQRG
MMAR_1933|M.marinum_M               DILVFEGPRNAFYLGAAEHD------MLFVIGGIGVTPILPMVALAHQRG
MUL_2159|M.ulcerans_Agy99           DILVFEGPRNAFYLGAAEHD------MLFVIGGIGVTPILPMVALAHQRG
MAV_3669|M.avium_104                DTVEFEGPRNAFYLGTAEHD------VLFVIGGIGVTPILPMIRVAAGRG
                                         .****** *  .         . *: ****:******:  *   *

MSMEG_3676|M.smegmatis_MC2_155      VDWSMIYAGRHPDSLPFLSELQRYG-DRIGIRTDDRDG-LPGASDLLGEC
TH_3804|M.thermoresistible__bu      VPWSMIYAGRSRDSLPFLEELTRYG-DRVRVRTDDVAG-LPTAAELLGAC
Mflv_3426|M.gilvum_PYR-GCK          VDWSMVYTGRSADALPFVDEVAAFG-SPVEIRTDDRRG-LPTAAELLGDC
Mvan_3180|M.vanbaalenii_PYR-1       VDWSMVYTGRSVDSLPFVDEVTAFG-AAVDIRTDDRHG-LPAAAELLGDC
MAB_4020c|M.abscessus_ATCC_199      LPWTMTYTGRSRESIPFRDELARYG-DRITIRTDDEDG-LPTPADLLPPL
Mb2798c|M.bovis_AF2122/97           IDWRAIYAGRGREYMPFLDEVVAVAPGRVTVWADDEHGRFASVDELLAGA
Rv2776c|M.tuberculosis_H37Rv        IDWRAIYAGRGREYMPFLDEVVAVAPGRVTVWADDEHGRFASVDELLAGA
MMAR_1933|M.marinum_M               VNWRAMYAGRSREYMPLLDELVAMAPERVSVWADDEHGRFAQVEDLVAGA
MUL_2159|M.ulcerans_Agy99           VNWRAVYAGRSREYMPLLDELVAMAPEGVSVWADDEHGRFAQVEDLVAGA
MAV_3669|M.avium_104                IDWRAIYTGRSREYMPLLDEVVSVDPQRVTVWADDEHGRFPTAAELLAAA
                                    : *   *:**  : :*: .*:       : : :**  * :.   :*:   

MSMEG_3676|M.smegmatis_MC2_155      PGGTTVYACGPAPMLTMLRTALVGRDDVELHFERFAAPPVVDGTEFSVRI
TH_3804|M.thermoresistible__bu      PDGTAVYACGPPAMLTAIRAELAGRRNVELHFERFAAPPVVDGRPFSVRI
Mflv_3426|M.gilvum_PYR-GCK          PADTSVYACGPAPMLTAVRDALVGRDDVELHFERFAAPPVVDGRPFR--V
Mvan_3180|M.vanbaalenii_PYR-1       ADGTAVYACGPAPMLTAVRAALVGRDDVELHFERFAAPPVTDGRPFQATV
MAB_4020c|M.abscessus_ATCC_199      HPDLAVYCCGPAPMLNVVRDAVAECDGAELHFERFSAPPIEHGVPFQVQL
Mb2798c|M.bovis_AF2122/97           GPTTAVYVCGPPGMLEAVRVARNQHADAPLHYERFSPPPVVDGVPFELEL
Rv2776c|M.tuberculosis_H37Rv        GPTTAVYVCGPPGMLEAVRVARNQHADAPLHYERFSPPPVVDGVPFELEL
MMAR_1933|M.marinum_M               GPKTAVYVCGPPPMLEAVRAARAEYPCAPLHYERFSPPPVVDGVPFELEL
MUL_2159|M.ulcerans_Agy99           GLKTAVYVCGPPPMLEAVRAARAEYPCAPLHYERFSPPPVVDGVPFELEL
MAV_3669|M.avium_104                GPATAVYVCGPSAMLEAVWIARNEHAGAPLHYERFSPAPVVDGVPFELEL
                                        :** ***. **  :         . **:***:..*: .*  *   :

MSMEG_3676|M.smegmatis_MC2_155      ASTGQTVPVAADETLLAALNRAGVSAPYSCQQGFCGTCRVRALPRDGDGA
TH_3804|M.thermoresistible__bu      ASTGAEVPVGADETLLAALGRAGVQAPYSCQQGFCGTCRTRVL----DGT
Mflv_3426|M.gilvum_PYR-GCK          AAAGVTVDVGVDETLLAALGRAGVTTPYSCRQGFCGTCRTRVL----SGE
Mvan_3180|M.vanbaalenii_PYR-1       ASTGQQVDVGADETLLAALRRAGVDASYSCQQGFCGTCRTRVL----AGS
MAB_4020c|M.abscessus_ATCC_199      GIGGPVLEVGADQSALAAVLTSRPGTPHSCRQGFCGTCKVKVL----AGR
Mb2798c|M.bovis_AF2122/97           ARSRRVLRVPANRSALDVMLDWDPTTAYSCQQGFCGTCKVRVL----AGQ
Rv2776c|M.tuberculosis_H37Rv        ARSRRVLRVPANRSALDVMLDWDPTTAYSCQQGFCGTCKVRVL----AGQ
MMAR_1933|M.marinum_M               ARTGEVLSIPANRTALDVMLDRDPTTAYSCQQGFCGTCKVKVL----AGQ
MUL_2159|M.ulcerans_Agy99           ARTGEVLSIPANRTALDVMLDRDPTTAYSCQQGFCGTCKVKVL----AGQ
MAV_3669|M.avium_104                ARSRQVLAVPANRTALDVMLDRDATTPYSCRQGFCGTCRVKVL----AGQ
                                    .     : : .:.: * .:      :.:**:*******:.:.*     * 

MSMEG_3676|M.smegmatis_MC2_155      VQHRDTLLTEPERAAGYLLTCVSRAGNGQRLTIEL
TH_3804|M.thermoresistible__bu      VEHRDRLLTEPERAAGLMLTCVSRAPAGERLTLDL
Mflv_3426|M.gilvum_PYR-GCK          VDHRDTLLTDAERAAGLMLPCVSRAAEGTVLALDL
Mvan_3180|M.vanbaalenii_PYR-1       VEHRDTLLTGPERAAGLMLTCVSRAGDGSGLTLDL
MAB_4020c|M.abscessus_ATCC_199      PDHRDSLLTETQRAEGQMLLCVSRAD-GERLVLDI
Mb2798c|M.bovis_AF2122/97           VDRRGRIIEGDN----EMLVCVSRAV-SGRVVIDA
Rv2776c|M.tuberculosis_H37Rv        VDRRGRIIEGDN----EMLVCVSRAV-SGRVVIDA
MMAR_1933|M.marinum_M               VDHRGRAAQGDD----EMLVCVSRGH-SARVVIDA
MUL_2159|M.ulcerans_Agy99           VDHRGRAAQGDD----EMLVCVSRGH-SARVVIDA
MAV_3669|M.avium_104                VDHRGRTDPGQD----GMLVCVSRAD-GGRLVIDA
                                     ::*.      :     :* ****.  .  :.::