For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRTTYVLSTGTALPGPAIDNRSLCERIGAQPEWIDTFVGTRTRHFGINLATGEQTHSLADMATSAARQAL SRADIDPSEIGFLVLGTATPDHLMPTSANLVADALGLEGIPTFQLQSGCSGAVAAFDVGSHLLTEERPLG LVIGADACYKHLPLDRESSSAMPPSELVNFVLFGDGAGAAVLALDDTDAQLGITALVNRFSGLGRDPGQQ IEWFGLADRHLEQPGLNEDYKAIEHWVPLLSKDVLTDLLATAGLQREDLDYLLPPQLSGKMTQRVVKQME IASNSREISVVADTGNNGNALPFLQIDALSREVQPGERAAVVAIESSKWIEGGMVLEGVA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3574c | - | - | 100% (341) | 3-oxoacyl- |
| M. abscessus ATCC 19977 | MAB_1141c | - | 5e-24 | 27.47% (324) | 3-oxoacyl-(acyl carrier protein) synthase III |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0547c | fabH | 4e-23 | 26.38% (326) | 3-oxoacyl-(acyl carrier protein) synthase III |
| M. gilvum PYR-GCK | Mflv_2540 | - | 4e-05 | 22.94% (327) | Beta-ketoacyl-acyl-carrier-protein synthase I |
| M. tuberculosis H37Rv | Rv0533c | fabH | 4e-23 | 26.38% (326) | 3-oxoacyl-(acyl carrier protein) synthase III |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_0879 | fabH | 6e-22 | 25.62% (324) | 3-oxoacyl- |
| M. avium 104 | MAV_4612 | - | 4e-24 | 27.18% (309) | 3-oxoacyl-(acyl carrier protein) synthase III |
| M. smegmatis MC2 155 | MSMEG_3953 | - | 4e-08 | 23.10% (290) | hypothetical protein MSMEG_3953 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0632 | fabH | 9e-22 | 25.62% (324) | 3-oxoacyl-(acyl carrier protein) synthase III |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0879|M.marinum_M ---------MTEIATTSGISSVGLLSVGAYRP-TRVVTNDEICENIDSSD
MUL_0632|M.ulcerans_Agy99 ---------MTEIATTSGISSVGLLSVGAYRP-TRVVTNDEICENIDSSD
MAV_4612|M.avium_104 ---------MKQISATSGPTNIGLLSVGSYRP-QRAVTNDELCQNIDSSD
Mb0547c|M.bovis_AF2122/97 ---------MTEIATTSGARSVGLLSVGAYRP-ERVVTNDEICQHIDSSD
Rv0533c|M.tuberculosis_H37Rv ---------MTEIATTSGARSVGLLSVGAYRP-ERVVTNDEICQHIDSSD
Mflv_2540|M.gilvum_PYR-GCK MAVDSHWLVMEGAGPRAR-YRSRLAGAGRHLPPTHLSTRDLMASTRHNTH
MSMEG_3953|M.smegmatis_MC2_155 --MGPHWLVMDAADEASSPFRTRIAAAGRCLPKTRLTTSELMSETRHNTH
MAB_3574c|M.abscessus_ATCC_199 -----------------MSRTTYVLSTGTALP-GPAIDNRSLCERIGAQP
: ..* * :..
MMAR_0879|M.marinum_M EWIYSRTGIKTRRFAAPEES------AASMAIEASREAIAKAALTGSDID
MUL_0632|M.ulcerans_Agy99 EWIYSRTGIKTRRFAAPEES------AASMAIEASREAIAKAALTGSDID
MAV_4612|M.avium_104 EWIYSRTGIKTRRFAARDES------TASMATEAGREAIAKAGLEASDID
Mb0547c|M.bovis_AF2122/97 EWIYTRTGIKTRRFAADDES------AASMATEACRRALSNAGLSAADID
Rv0533c|M.tuberculosis_H37Rv EWIYTRTGIKTRRFAADDES------AASMATEACRRALSNAGLSAADID
Mflv_2540|M.gilvum_PYR-GCK IDLERLTGIRDRRVSTGDED------SYSLATAAAVDCLDRAGQDAAGLD
MSMEG_3953|M.smegmatis_MC2_155 IDLERLTGIRERRVSLGEDD------SYSLATKAALDCLEKADRSADSVE
MAB_3574c|M.abscessus_ATCC_199 EWIDTFVGTRTRHFGINLATGEQTHSLADMATSAARQALSRADIDPSEIG
: .* : *:.. .:* * .: .* :
MMAR_0879|M.marinum_M GVIVATSTHFLQ------TPACAPIVAAALGCQNVPAFDISAGCSGFGHA
MUL_0632|M.ulcerans_Agy99 GVIVATSTHFLQ------TPACAPIVAAALGCQNVPAFDISAGCSGFGHA
MAV_4612|M.avium_104 CVVVATSTHFLQ------TPACGPAVAAALGATGVPAFDISAGCAGFGYA
Mb0547c|M.bovis_AF2122/97 GVIVTTNTHFLQ------TPPAAPMVAASLGAKGILGFDLSAGCAGFGYA
Rv0533c|M.tuberculosis_H37Rv GVIVTTNTHFLQ------TPPAAPMVAASLGAKGILGFDLSAGCAGFGYA
Mflv_2540|M.gilvum_PYR-GCK VVINCSITKFRDGLTQWMEPTMSAAVARAIGAEHAMTFDLSNACAGMLTG
MSMEG_3953|M.smegmatis_MC2_155 VVINCSITKFHGGLTQYLEPTMSSDVAHAIGARDAMTFDISNACAGMLTG
MAB_3574c|M.abscessus_ATCC_199 FLVLGTATPDHL------MPTSANLVADALGLEGIPTFQLQSGCSGAVAA
:: : * *. . ** ::* *::. .*:* .
MMAR_0879|M.marinum_M LGIAADMIRGGSAATILVIGTEKLSPTVDMTDRSNCFIFADGAASVLVGH
MUL_0632|M.ulcerans_Agy99 LGIAADMIRGGSAATILVIGTEKLSPTVDMTDRSNCFIFVDGAASVLVGH
MAV_4612|M.avium_104 LGVAADMVRGGTAGKVLVLGSEKLSPTVDMTDRSNCFIFADGAAGVVVGE
Mb0547c|M.bovis_AF2122/97 LGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGE
Rv0533c|M.tuberculosis_H37Rv LGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGE
Mflv_2540|M.gilvum_PYR-GCK ATVLNNWIRQGTVQRGLVVSGEYISQLGQNAARHIRSIMSKELACLTLGD
MSMEG_3953|M.smegmatis_MC2_155 VMVLNTWIRQGLVARGMVVSGEYISQLGQNAAKHIRTVLSKELASLTLGD
MAB_3574c|M.abscessus_ATCC_199 FDVGSHLLTEERPLGLVIGADACYKHLPLDRESSSAMPPSELVNFVLFGD
: :: . . . : .*.
MMAR_0879|M.marinum_M SPIQGIGPTVWGS--DGEQAAAIR---------QDIDWISHAEN-PAGPR
MUL_0632|M.ulcerans_Agy99 SPIQGIGPTVWGS--DGEQAAAIR---------QDIDWISHAEN-PAGPR
MAV_4612|M.avium_104 TPTQGIGPTVWGS--DGTQATAIR---------QDIDWMDYLDR-PTGPR
Mb0547c|M.bovis_AF2122/97 TPFQGIGPTVAGS--DGEQADAIR---------QDIDWITFAQN-PSGPR
Rv0533c|M.tuberculosis_H37Rv TPFQGIGPTVAGS--DGEQADAIR---------QDIDWITFAQN-PSGPR
Mflv_2540|M.gilvum_PYR-GCK AGAALLFERAPADSAAGISLAGFT---------TVADHSRLCLAYPKGDD
MSMEG_3953|M.smegmatis_MC2_155 AGAALLLERVPAG-GSGITLAGFT---------TIADYSRLCLAYPKGRD
MAB_3574c|M.abscessus_ATCC_199 GAGAAVLALDDTDAQLGITALVNRFSGLGRDPGQQIEWFGLADR--HLEQ
: . * :
MMAR_0879|M.marinum_M PFLRMEG--TAVFRWAAFEMGKVGQQAMDAAGVKPDEIDVFIPHQANSRI
MUL_0632|M.ulcerans_Agy99 PFLRMEG--TAVFRWAAFEMGKVGQQAMDAAGVKPDEIDVFIPHQANSRI
MAV_4612|M.avium_104 PFLRLEG--SAVFRWAAFEMGKVGQQAMDAAGVRPDEIDVFLPHQANSRI
Mb0547c|M.bovis_AF2122/97 PFVRLEG--PAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI
Rv0533c|M.tuberculosis_H37Rv PFVRLEG--PAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI
Mflv_2540|M.gilvum_PYR-GCK PGARMFTDSRGIQRAAIAATPYLLHEVLDAAGISIGDIDHVITHQTSARA
MSMEG_3953|M.smegmatis_MC2_155 PGARMFTDSRAIHRAAITNTPVLLREVLDTAGISIDDIDHVITHQTSARA
MAB_3574c|M.abscessus_ATCC_199 PGLNEDY--KAIEHWVPLLSKDVLTDLLATAGLQREDLDYLLPPQLSGKM
* . .: : . : : :**: ::* .:. * ..:
MMAR_0879|M.marinum_M N----ELLTKNLQLRPDAVIANDIEHTGNTSAASIPLAMAELLATGAAKP
MUL_0632|M.ulcerans_Agy99 N----ELLTKNLQLRPDAVIANDIEHTGNTSAASIPLAMAELLATGAAKP
MAV_4612|M.avium_104 N----EILAKSLELRPDAVIANDIEHTGNTSAASIPLAMAEVLATGAAKA
Mb0547c|M.bovis_AF2122/97 N----ELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKP
Rv0533c|M.tuberculosis_H37Rv N----ELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKP
Mflv_2540|M.gilvum_PYR-GCK IRKGMAALTESFGGGPRHDAVITVDRYGNTASTTHTVALVEELEAGRIRA
MSMEG_3953|M.smegmatis_MC2_155 IKKGMAVMAAEFGDHPRHDAVITVDRYGNTASTTHTVALIEELEARRIEP
MAB_3574c|M.abscessus_ATCC_199 T----QRVVKQMEIASNSREISVVADTGNN-GNALPFLQIDALSR-EVQP
:. .: . : **. . : .. : * ..
MMAR_0879|M.marinum_M GDLALLIGYGAGLSYAAQVVRMPNS---------
MUL_0632|M.ulcerans_Agy99 GDLALLIGYGAGLSYAAQVVRMPNS---------
MAV_4612|M.avium_104 GDLALLIGYGAGLSYAAQVVRLPPG---------
Mb0547c|M.bovis_AF2122/97 GDLALLIGYGAGLSYAAQVVRMPKG---------
Rv0533c|M.tuberculosis_H37Rv GDLALLIGYGAGLSYAAQVVRMPKG---------
Mflv_2540|M.gilvum_PYR-GCK GETIALIALASGLEIGVVLLTLDEELVNRYGHRD
MSMEG_3953|M.smegmatis_MC2_155 GETVALIALASGLEIGIHLADR------------
MAB_3574c|M.abscessus_ATCC_199 GERAAVVAIESSKWIEGGMVLEGVA---------
*: ::. :. :