For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KFGPGTSAGTAATAAPSLNAAPAASTEGQTRAAVVRLLLESGPITAGEIGERLGLSAAGVRRHLDALIDA GDAVAHPAAAWQHHGRGRPAKRFQLTADGRAKLNHAYDDLASAAMRQLREIGGDEAVRTFARRRIDTILG DLTIGAPQDDLPAAVGQVADALTRAGYAASTQKVGGSGGFLQGVQICQHHCPVSHVAAEFPELCEAEQQA FAAVLGTHVQRLATIANGDCACTTHVPMQTSPPA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2750c | - | - | 100% (245) | transcriptional regulatory protein |
M. abscessus ATCC 19977 | MAB_0215 | - | 3e-05 | 29.38% (194) | transcriptional regulator |
M. abscessus ATCC 19977 | MAB_3318 | - | 6e-05 | 43.28% (67) | putative regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1495 | - | 7e-89 | 73.54% (223) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_3678 | - | 7e-86 | 73.73% (217) | putative transcriptional regulator |
M. tuberculosis H37Rv | Rv1460 | - | 7e-89 | 73.54% (223) | transcriptional regulatory protein |
M. leprae Br4923 | MLBr_00592 | - | 3e-83 | 69.06% (223) | putative DNA-binding protein |
M. marinum M | MMAR_2265 | - | 2e-89 | 73.01% (226) | transcriptional regulatory protein |
M. avium 104 | MAV_3319 | - | 1e-86 | 69.87% (229) | DNA-binding protein |
M. smegmatis MC2 155 | MSMEG_3121 | - | 2e-87 | 66.26% (243) | DNA-binding protein |
M. thermoresistible (build 8) | TH_1094 | - | 7e-34 | 62.28% (114) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN |
M. ulcerans Agy99 | MUL_1861 | - | 2e-89 | 73.01% (226) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_2732 | - | 1e-86 | 74.30% (214) | putative transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb1495|M.bovis_AF2122/97 MTSTTLPHRASLVDRSTEFCHTDVVKIP-------------AVSTTV--P Rv1460|M.tuberculosis_H37Rv MTSTTLPHRASLVDRSTEFCHTDVVKIP-------------AVSTTV--P MAV_3319|M.avium_104 --------------------------MG-------------AAG------ MMAR_2265|M.marinum_M -----------MLDRCPELRHTGVVKIQPEFS---------AAHSAA--L MUL_1861|M.ulcerans_Agy99 -----------MLDRCPELRHTGVVKIQPEFS---------AAHSAA--L MLBr_00592|M.leprae_Br4923 --MLNVHRGYPSLDRSPELRHTGVVKIRSELD---------AATT----- Mflv_3678|M.gilvum_PYR-GCK ------------------MRHTGVVKFRSQSS---------EAPTSAPLH Mvan_2732|M.vanbaalenii_PYR-1 ------------------------------------------------MS MAB_2750c|M.abscessus_ATCC_199 ------------------MKFGPGTSAGTAAT---------AAPSLNAAP MSMEG_3121|M.smegmatis_MC2_155 ------------MEPSDEFRHNGVVKLRGGATSPVATGPSVPAADEVPGV TH_1094|M.thermoresistible__bu -------------------------------------------------- Mb1495|M.bovis_AF2122/97 AAVSDGH--TRRAIVRLLLESGSITAGEIGDRLGLSAAGVRRHLDALIEA Rv1460|M.tuberculosis_H37Rv AAVSDGH--TRRAIVRLLLESGSITAGEIGDRLGLSAAGVRRHLDALIEA MAV_3319|M.avium_104 AAVPDGH--TRRAIVRLLLESGSITAGEIGDRLGLAAAGVRRHLDALIEA MMAR_2265|M.marinum_M VAGSDGH--TRRAIVRLLLESGSITAGEIGDRLGLSAAGVRRHLDALIDA MUL_1861|M.ulcerans_Agy99 VAGSDGH--TRRAIVRLLLESGSITAGEIGDRLGLSAAGVRRHLDALIDA MLBr_00592|M.leprae_Br4923 VAVSDGH--TRRAVVRLLLESGSITAGEISDRLGLSAAGVRRHLDVLIEM Mflv_3678|M.gilvum_PYR-GCK PVDGDHHGDTRSAIVRLLLESGPVTAGHIGQQLGLSAAGVRRHLDALIEA Mvan_2732|M.vanbaalenii_PYR-1 PQAADGH--TRGAIVRLLLESGPVTASRIGERLGLSAAGVRRHLDALIEA MAB_2750c|M.abscessus_ATCC_199 AASTEGQ--TRAAVVRLLLESGPITAGEIGERLGLSAAGVRRHLDALIDA MSMEG_3121|M.smegmatis_MC2_155 ISTADGQ--TRRAIIKLLLE-GPITAGQIGERLGISAAGVRRHLDALIEA TH_1094|M.thermoresistible__bu -------------------------------------------------- Mb1495|M.bovis_AF2122/97 GDAEASAAAPWQQVGRGRPAKRYRLTAAGRAKLDHSYDDLASAAMRQLRE Rv1460|M.tuberculosis_H37Rv GDAEASAAAPWQQVGRGRPAKRYRLTAAGRAKLDHSYDDLASAAMRQLRE MAV_3319|M.avium_104 GDAESIAPAAWQHAGRGRPAKRYRLTSAGRAKLDHAYDDLAAAAMRQLRE MMAR_2265|M.marinum_M GDAESAPAAPWQQAGRGRPAKRYRLTPGGRAKLEHSYDDLAAAAMRQLRE MUL_1861|M.ulcerans_Agy99 GDAESAPAAPWQQVGRGRPAKRYRLTPGGRAKLEHSYDDLAAAAMRQLRE MLBr_00592|M.leprae_Br4923 GDAESATAAPWQQVGRGRPAKHYRLTAVGRAKLGHAYDTLASAAMRQLRE Mflv_3678|M.gilvum_PYR-GCK GDAQANAAAAWQQEGRGRPAKRYRLTAAGRAKLEHTYDDLASAAMRQLRE Mvan_2732|M.vanbaalenii_PYR-1 GEAQANAAAAWQQEGRGRPAKRYQLTSAGRAKLEHTYDDLASAAMRQLRE MAB_2750c|M.abscessus_ATCC_199 GDAVAHPAAAWQHHGRGRPAKRFQLTADGRAKLNHAYDDLASAAMRQLRE MSMEG_3121|M.smegmatis_MC2_155 GDAQASAAAAWQHTGRGRPAKRYRLTAAGRAKLGHSYDDLAVAAIRQLRE TH_1094|M.thermoresistible__bu -----------------VPSDTX----XGRS------------------- *:. **: Mb1495|M.bovis_AF2122/97 IGGEEAVRTFARRRIDAILADVAPADGP-DDAALEAAAERIATALSKAGY Rv1460|M.tuberculosis_H37Rv IGGEEAVRTFARRRIDAILADVAPADGP-DDAALEAAAERIATALSKAGY MAV_3319|M.avium_104 IGGEEAVQAFARQRIDAILAGVPGAASA-ADDDIEAAAQRIATALTKAGY MMAR_2265|M.marinum_M IGGDDAVRTFARRRIDAILAGVPAAASP-DDAAVEAAAERVASALTKAGY MUL_1861|M.ulcerans_Agy99 IGGDDAVRTFARRRIDAILAGVPAAASP-DDAAVEAAAERVASALTKAGY MLBr_00592|M.leprae_Br4923 IGGEDAVRTFARQRIDAILADVEPAGG---GADVEAAANRVASALSDAGY Mflv_3678|M.gilvum_PYR-GCK IGGDDAVRTFARRRIDTILAGVEPVDDASRGEEIEAAADRIADALTGAGY Mvan_2732|M.vanbaalenii_PYR-1 IGGEEAVRTFARRRIDTILSGVEHVD---GGEGVEAAAGQIAEALSAAGF MAB_2750c|M.abscessus_ATCC_199 IGGDEAVRTFARRRIDTILGDLTIGAPQ---DDLPAAVGQVADALTRAGY MSMEG_3121|M.smegmatis_MC2_155 IGGKDAVRTFARRRIDTILSGVTAGSG-----DVAQTAERVADAMTKAGY TH_1094|M.thermoresistible__bu ----------PRRRIDAILAGVLGVSEG--AGDVESTAERVARALTRAGY .*:***:**..: : :. ::* *:: **: Mb1495|M.bovis_AF2122/97 VATTTRVGGP---IHGVQICQHHCPVSHVAEEFPELCETEQQAMAEVLGT Rv1460|M.tuberculosis_H37Rv VATTTRVGGP---IHGVQICQHHCPVSHVAEEFPELCETEQQAMAEVLGT MAV_3319|M.avium_104 VATTTQVGGP---IHGVQICQHHCPVSHVAEEFPELCDAEQQAMAEVLGT MMAR_2265|M.marinum_M VATTTRVGGP---IHGVQICQHHCPVSHVAEEFPELCEAEQQAIAEVLGT MUL_1861|M.ulcerans_Agy99 VATTTRVGGP---IHGVQICQHHCPVSHVAEEFPELCEAEQQAIAEVLGT MLBr_00592|M.leprae_Br4923 VATTARVGGP---IHGVEICQHHCPVSHVAEEFPELCETEQQAIAEVLGT Mflv_3678|M.gilvum_PYR-GCK ATTTPRVRGP---LSGVQICQHHCPVSHVAEQFPELCEAEQQAMSDVLGT Mvan_2732|M.vanbaalenii_PYR-1 ATTTARVGGP---VGGVQICQHHCPVSHVAEEFPELCEAEQQAMAEVLGT MAB_2750c|M.abscessus_ATCC_199 AASTQKVGGSGGFLQGVQICQHHCPVSHVAAEFPELCEAEQQAFAAVLGT MSMEG_3121|M.smegmatis_MC2_155 ATTTAPVSGP---IRGVQICQHHCPVSHVAEEFPELCETEREAFAEILGT TH_1094|M.thermoresistible__bu AATTSRVPGP---VDGVQICQHHCPVSHVAEEFPELCDAEREAFAEILDT .::* * *. : **:************ :*****::*::*:: :*.* Mb1495|M.bovis_AF2122/97 HVQRLATIVNGDCACTTHVPLSP---------------APSPRPPATSTE Rv1460|M.tuberculosis_H37Rv HVQRLATIVNGDCACTTHVPLSP---------------APSPRPPATSTE MAV_3319|M.avium_104 HVQRLATIVNGDCACTTHVPLAQTA------------KAPSPRRHTTSNK MMAR_2265|M.marinum_M HVQRLATIVNGDCACTTHVPLTP---------------APSPRQHLTSTG MUL_1861|M.ulcerans_Agy99 HVQRLATIVNGDCACTTHVPLTP---------------APSPRQHLTSTG MLBr_00592|M.leprae_Br4923 HVQRLAMIVNGDCACTTHVPLMS---------------VPSKT------- Mflv_3678|M.gilvum_PYR-GCK HVQRLATIVNGDCACTTHVPLVP------------------ER------- Mvan_2732|M.vanbaalenii_PYR-1 HVQRLATIANGDFACTTHVPLSP------------------AGR------ MAB_2750c|M.abscessus_ATCC_199 HVQRLATIANGDCACTTHVPMQT-----------------SPPA------ MSMEG_3121|M.smegmatis_MC2_155 HVQRLATIVNGDCACTTHVPLDLDPPGEHTDHPKDVRSTARDRTTTPSDQ TH_1094|M.thermoresistible__bu HVQRLATIVNGDNACTTHVPLPNRMPSHRKQPRKP--NRVQPRTATTSPQ ****** *.*** *******: Mb1495|M.bovis_AF2122/97 GVSR Rv1460|M.tuberculosis_H37Rv GASR MAV_3319|M.avium_104 GASL MMAR_2265|M.marinum_M GASA MUL_1861|M.ulcerans_Agy99 GASA MLBr_00592|M.leprae_Br4923 ---- Mflv_3678|M.gilvum_PYR-GCK ---- Mvan_2732|M.vanbaalenii_PYR-1 ---- MAB_2750c|M.abscessus_ATCC_199 ---- MSMEG_3121|M.smegmatis_MC2_155 GAST TH_1094|M.thermoresistible__bu GASS